Bordetella parapertussis Bpp5: BN117_3968
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Entry
BN117_3968 CDS
T02297
Symbol
dbpA
Name
(GenBank) probable ATP-dependent RNA helicase
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
bpar
Bordetella parapertussis Bpp5
Brite
KEGG Orthology (KO) [BR:
bpar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bpar03009
]
BN117_3968 (dbpA)
Enzymes [BR:
bpar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BN117_3968 (dbpA)
Ribosome biogenesis [BR:
bpar03009
]
Prokaryotic type
rRNA helicases
BN117_3968 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
P-loop_SecA
CMS1
Motif
Other DBs
NCBI-ProteinID:
CCJ51301
UniProt:
K0MN77
LinkDB
All DBs
Position
complement(4261986..4263365)
Genome browser
AA seq
459 aa
AA seq
DB search
MTNTSFSSLPLLPALLDNLQGLGFEQMTPIQAQSLPLILEGRDLIAQAKTGSGKTAAFGL
GVLQNLDVNRLAPQALVLCPTRELADQVAQELRRLARLIPNVKVLTLCGGAAARPQAESL
ARGTHLVVGTPGRIQDHLARGSLDLSTLNTLVLDEADRMVDMGFYDDIAAIASHCPARRQ
TLLFSATYPDNIRKLSARFLRNPAEIKVEAQHDASRIEQLFFEIDEGQRLDAVAALLAHF
RPASTLAFCNTKIRSHDLVERLRAQGISAQALNGDLEQRERDEILIQFANQSCAVLVATD
VAARGLDIQNLGAVINVDVTKDTEVHVHRIGRGDQKGLALSLCSPEEMRWANLIEQYQGA
PLKWADLGSLRPKSDRPLRAPMITLCIQGGKKDKLRPGDLLGALTGDGGLAFEQVGKINI
TEFNAYVALDRQVAKQAFARLSNSNIKGRRFRMRFLEEF
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaacacgtctttttcctccctgcctcttctgcccgccttgctcgacaacctgcaa
ggcctgggcttcgaacagatgacgccgatccaggcgcaaagcctgccgctcatcctggaa
ggccgcgacctgattgcgcaagccaagaccggcagcggcaagaccgccgcattcggcctg
ggcgtgctgcagaacctggacgtcaaccgcctggcgccgcaggcgctggtgctctgtccc
acccgcgaactggccgaccaggtggcccaggagctgcgccggctggcccgcctgattccc
aacgtcaaggtgctgacgctgtgcggcggcgccgccgcgcgtccccaggccgaatcgctg
gcgcgcggcacgcatctggtggtgggtacgcccggccgcatccaggaccacctggcgcgc
ggcagcctggacttgtccacgctgaacacgctggtgctggacgaggccgatcgcatggtg
gacatggggttctacgacgacatcgccgccattgcctcgcattgcccggccaggcggcag
accctgctgttctcggccacctaccccgacaacatccgcaagctgagcgcccgcttcctg
cgcaatccggccgaaatcaaggtggaggcccagcacgacgccagccgcatcgagcagctc
ttcttcgagatcgacgaaggccagaggctggatgccgtggcggcgctgctggcccacttc
cgcccggcgtccacgctggcgttctgcaacaccaagatccgcagccacgacctggtcgaa
cgcctgcgcgcccagggcatcagcgcccaggcgctcaacggcgacctggagcagcgcgag
cgcgatgaaatcctgatccagttcgccaaccagagctgcgccgtgctggtcgccaccgac
gtggccgcccgcgggctggacatccagaatctgggcgcggtcatcaacgtggacgtgacc
aaggacaccgaagtccacgtgcaccgcatcggccgcggcgaccagaaagggctggcgctg
agcctgtgttcgcccgaggaaatgcgctgggccaacctcatcgagcaataccagggcgcc
ccgctgaaatgggccgacctcggctcgctgcggcccaagtccgaccgccccttgcgcgcg
cccatgatcaccctgtgcatccagggcggcaagaaggacaagctgcgtcccggcgacctg
ctgggcgccctgaccggtgacggcgggctggcgttcgagcaggtcggcaagatcaacatc
accgaattcaacgcctatgtggcgctggaccgccaggtcgccaagcaggccttcgcgcgc
ctgtccaacagcaatatcaagggacggcggttccgcatgcgcttcctggaagagttctga
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