Bordetella parapertussis Bpp5: BN117_4550
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Entry
BN117_4550 CDS
T02297
Symbol
trmE
Name
(GenBank) putative tRNA modification GTPase
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
bpar
Bordetella parapertussis Bpp5
Brite
KEGG Orthology (KO) [BR:
bpar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bpar03016
]
BN117_4550 (trmE)
Transfer RNA biogenesis [BR:
bpar03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
BN117_4550 (trmE)
Prokaryotic type
Methyltransferases
BN117_4550 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
AIG1
GCV_T
Ras
MMR_HSR1_Xtn
Arf
Roc
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
CCJ51883
UniProt:
K0MLN4
LinkDB
All DBs
Position
4875294..4876646
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AA seq
450 aa
AA seq
DB search
MSLYAPIAAIATAPGRGGIGVVRISGPDLAELAQRLFGRPLTPRHAHYLPFRAADGEVID
EGLAIYFRAPHSYTGEDVLELQGHGGPAVLRRILARCLQAGHDLGLRPAEPGEFTRRAFL
NERLDLAQAEAVADLIDASSEAAARGAMASLSGEFSQRVNDLSDRIIHLRMLVEATLDFP
EEEIDFLEKYQARPTLQALTHDLDTLIAQARQGVILREGLHVVLAGKPNVGKSSLLNALA
GDDIVIVTPIAGTTRDKVVQEIHIDGVPLHIVDTAGLRDTDDAVESIGIERTWKEIERAD
LILHLQDVTQPPDHLDAQIVRRLPARTPVLNVFNKVDLLDAAFQGQPDSLAISARGGIGL
DALRQRLLQLAGWNPGAESPWLARERHLHALQQAAQHLEIATEHAREDDRVLDLFAEELR
LAHEALTGITGKFTSDDLLGEIFSSFCIGK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgtacgcccccattgctgcaatcgccacggcccccggccgcgggggcatcggc
gtggtgcgcatatccgggcccgatctcgccgaacttgcacaacggctgttcgggcgtccg
ctgacgccgcgccacgcgcactacctgccgtttcgcgccgccgacggcgaggtgatcgac
gaagggctcgccatctacttccgtgctccgcactcctataccggcgaagacgtactggag
ctgcagggacatggcggccccgccgtgctgcgccgcatcctggcgcgctgcctgcaggcg
ggccacgacctcggactgcgtccggccgaacccggcgagttcacccgccgcgcctttctc
aacgagcgcctcgacctggcccaggccgaagccgtggccgacctcatcgacgcctcctcg
gaagccgccgcgcgcggcgccatggcgtcgctgtcgggcgagttctcgcagcgcgtcaac
gacctgtccgaccgcatcatccacctgcgcatgctggtggaagccaccctggactttccc
gaagaagaaatcgacttcctcgagaaataccaggcgcggcccacgctgcaggcgctcacg
cacgacctcgacacgctcattgcccaggcgcgccagggcgtgatcctgcgcgaaggcctg
cacgtcgtgctggccggcaaacccaatgtgggcaagtccagcctgctcaacgccctggcc
ggcgacgacatcgtcatcgtcacgcccatcgcgggcaccacgcgcgacaaggtcgtgcag
gagatccacatcgatggcgtaccgctgcacatcgtcgacaccgccggcttgcgcgacacc
gacgacgccgtcgaaagcataggcatcgaacgcacctggaaagagatcgagcgcgccgac
ctcatcctgcacctgcaggacgtcacccagccgcccgatcacctcgacgcgcaaatcgtc
aggcgcctgcccgcgcgcacgccggtgctaaacgtcttcaacaaagtcgatctgctcgac
gcggcgttccagggccagcccgacagcctggccatctccgcgcgcggcggcatcggcctg
gacgcattgcgccagcgcctgctgcaactggccggctggaaccccggcgccgaatcgcca
tggctggcgcgcgaacgccatctgcatgcgctgcaacaggccgcgcagcatctcgagatc
gccaccgaacacgcccgcgaggacgaccgcgtgctggacctgttcgccgaagagctgcgc
ctggcgcacgaagccctgaccggcatcaccggcaaattcaccagcgacgacttgctgggc
gagatcttttcgagtttctgcatcggcaagtag
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