Bombus pascuorum (common carder bee): 132904685
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Entry
132904685 CDS
T09597
Name
(RefSeq) TATA-binding protein-associated factor 172 isoform X1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
bpas
Bombus pascuorum (common carder bee)
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpas03021
]
132904685
Transcription machinery [BR:
bpas03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
132904685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
TPR_Trm732_C
HEAT_GCN1_C
ResIII
DEAD
TPR_DNAAF5
HEAT_2
HEAT_GCN1
HEAT_ECM29
HEAT_MROH2B_C
Ltn1_1st
Motif
Other DBs
NCBI-GeneID:
132904685
NCBI-ProteinID:
XP_060811360
LinkDB
All DBs
Position
2:5344557..5352972
Genome browser
AA seq
1901 aa
AA seq
DB search
MTSRLDRLFILLETGTNAVTKRAAAQQLGEAQRLHPHDLHHLLARVSILLKSSQWDTRVC
AAQAVQAILAQVPTWDPQPIKKETCTEDEEAKRPNSKLNLEDFNMEKILSRSSYLTGSEG
NEYDLTATDGEQMLLPNQKEKIAAKLGLHPQLMGVDTSELFTNEDLTPEVLPPASNIQTN
VSVSETLKQPTGLSRREMNRARRKARQTVSKQRSREPDDHRNNEDSIQHNNSNAQSPISN
EGESLNKRIKLEELISLEIGVNYNSQTESVNGVPDSTGCWPDSVINWPLESFAESLCQDL
FSQKWEIRHGAATALRELVKLHGKGAGKSKNQTAEEMAESHYRWLIDAALRLLCVLGLDR
FGDFVSDQVVAPVRETCAQALGSLLLLVPNQKDDENKNRGITGILSVMLKLLEHDEWEAR
HGALLALKYLLAIRDDLLDDILPKVFPATMQGLSDPVDDVGAAAASALIPVASALPRLLK
PSELEAIVIRLWELLREQDDLAAACNSFMKLLAAILSLPWARSYITPQPLSQVLPRLWPF
LSHSSSSVRKATLQTLQTLTEDDGAHNENKKERWGEGGGLVLQEALRHVFQRALIEHVIA
IQDVAERVWENLVVQSDLELLLHAACPLVSTWLCLAMQPEHVPFNPNLLMITTPNKGAKN
NQVSGSNDGQSDASNNGGSNTVGGNAKSISELKVYIGGIETVAPNIRKSNLTRARCRAAR
MLGLLSHYVVQPAPGVTYTPDILSPSLCYAKVLLAHLNSHSALQRTIVGLTMSHWATVNN
MKPPIIPDILRKRLLECLNEYVYYDEIATSFTRLLHDSRGYVATLKHYNLPVLIKVEPSG
VMTLDQIAVLAGKPISKLCAMGNTTSYGGPSGSYSNTAIPIKLKPKLIESLEERRSAVKI
GAADIAAQQLSYNVMSMAALAGAATMLHCLPPSPQPLNPLIKPLMEAIKREENEELQKLA
AKHLSYLVDLCVDRKPTPNAKISTNLCTFLCSDTEFTPRVNCNTNTNLFDGILTLSNRQK
HAERIAYNRGTNSGLSGGRGPGRPPTTEIPLLELLAYEEPEAKADRTRRRGATLALTAIA
TLFGAQLPTRLPHLWELILPNVLQEKDKIGSRENIEEEVNQLIFGLQVLEVMAPSLHKAL
LPPVLECLSFLCELLAHPYKAVRHMASRCIAVLATLDTEKIIMQVTSRVIPLLESTGGEK
IYSATVTAPSEVDSVKQGAAEALACLVESLGVNIVPYAVLFMVPLLGRMSDQNQAVRLAC
SVTFATLVQLLPLDPGAITDPPDLIEKKTQEWRFLEQLLNPQSIPDTVLPIPVSAELRSY
QQQGLNWLNFLNRYRLHGVLCDDMGLGKTLQTLCILALDHHRNPRAPPSLVVCPPTLTGH
WVYEAEKFFKTKDLSVLQYVGTPPEREKLRPMVTYHKLIVASYEIMRKDIDYFETCQWNY
CVLDEGHIIKNGKTKSAKATKRLHANHRLILSGTPIQNDVLELWSLFDFLMPGFLGTEKQ
FAAKYSRPILACREPKAGPKEQEAGALAMEALHRQVLPFLLRRNKEDVLKDLPPKITQDY
YCDLSSLQRTLYEDFHTRRSVTLLSATSCTSTGNNGCSVFEALRYLRNVCNHPKLVLNPR
HPLYATVCNTLKQRKSTLAEIEYAAKLPALKQLLLDCGIGQPQRQQNRNSVTTDGTSDNQ
PPQEQQLVSQHRALIFCQLKAMLDIVEKDLLCAHLPTVTYLRLDGSVQTTQRHSIVTRFN
ADPSIDVLLLTTQVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRL
ITRSTVEEKIMGLQKFKLLTANTVISTENASLETMATDQLLDLFTLDDGKEKKSEIQDDA
TSKISEVPGISRSVLEILPELWEQQQYDDEYDIQSFLSTLK
NT seq
5706 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaaggctagacaggctattcatactattggaaacagggacaaatgcagtaact
aaaagagctgcagcacaacaattaggagaagcacaaagattacatcctcatgatttacat
catttattggcaagagtttctatacttttaaagtcttcacaatgggataccagagtttgt
gctgcacaagctgtacaagctatacttgctcaagttcctacttgggatccacaacccatt
aaaaaagaaacatgtacagaagatgaagaagcaaaaagaccaaacagtaaattaaatttg
gaagactttaatatggaaaagattttatcacgtagttcatatcttactggatcagaaggc
aatgaatatgatttaacagctactgatggggagcaaatgctacttcctaatcaaaaggaa
aaaattgctgctaaattaggccttcatccacaattaatgggagttgatacatcagaactg
tttaccaacgaagatcttacgccagaagtattaccacctgcatcaaatatacaaactaat
gtatctgtgagtgaaacgctaaaacaacctactggccttagtagacgtgaaatgaataga
gctagacgtaaggcacgacagacggtttcaaaacaacgttcacgagaacctgatgaccat
cgtaacaacgaagattcaattcaacacaacaattcaaatgctcaatctcccatcagtaat
gaaggggaatcactaaataaaagaataaaattagaggaactgatttcattagagattggc
gttaattataattcacagactgaatcagtcaatggagtaccagatagtactggttgctgg
ccagattctgtaataaattggcctctagaatcatttgcagaaagtctctgtcaagattta
tttagtcaaaaatgggaaataaggcacggagcagcgactgctttacgtgaacttgtaaaa
cttcatggaaaaggtgcaggtaaatcgaagaatcaaactgcagaggaaatggcagaaagt
cattatcggtggcttattgatgccgccctgcgactactatgtgttttaggattagataga
tttggagattttgtttctgatcaagttgttgcgcccgtacgagaaacatgtgcccaagca
ctaggatctcttttattactagtgccaaatcaaaaagatgatgaaaataaaaatagggga
attacaggaatactttcagtcatgctaaaactgttagagcacgatgaatgggaagcaaga
catggtgcgctacttgcactcaaatatttacttgctatacgagatgatctgttagacgac
atactaccaaaagtatttccagctactatgcaaggtctttccgatccagtcgatgatgta
ggtgctgcggcagcaagtgcgcttataccagtagcatctgctctaccacgtttgttaaaa
ccatcagaactagaagcaattgtaattcgtctttgggaacttttacgtgaacaagatgat
ctagcagcagcatgtaatagtttcatgaaattacttgctgctatactttcattaccttgg
gcgcgctcttatattacacctcagccattatcgcaagtcttaccacgattatggccattt
cttagtcattctagttccagtgtacgtaaagccaccttacaaacattacaaacactaact
gaagatgatggtgctcataatgagaataaaaaagaacgatggggcgaaggaggtggactt
gtattgcaagaggccctccgtcatgtttttcaacgagcgttaatagagcacgtaattgcc
atacaagatgtagctgaacgtgtttgggaaaatctagtcgtacaaagcgatctcgaactt
ctattgcatgcagcgtgtcctcttgtcagcacatggctttgccttgcaatgcaaccggaa
cacgtgccatttaatccgaacttactcatgataaccactcctaataaaggagctaagaat
aatcaagtttctggtagtaacgacggacaatcagatgctagtaataacggaggaagtaat
actgttggtggaaatgcaaaatccatatccgaattaaaagtttatattggtggaatcgaa
actgtagctccaaacataaggaaatcaaacttaactcgtgctcgttgtagagctgcacga
atgttagggttgttatcgcattacgtagtacaaccagcaccaggtgttacttacacacca
gatatacttagtccttcactttgttatgctaaagtattactggcacatctgaattcgcat
tcagcattacaacgcaccattgtaggtttaacgatgtctcattgggcgactgtaaataac
atgaaaccacctataataccagatattttaaggaagagactattggagtgtttgaacgag
tacgtatactacgatgagatcgccacatcttttactcgtctgttacacgacagtcgcggt
tacgttgccactctcaaacattataacctgcctgttcttatcaaggtagaaccatcggga
gtgatgacgctcgaccaaattgcagtccttgctgggaaaccaatttcaaaactttgtgcc
atgggtaatacgacaagctatggaggacctagtggaagttatagcaacaccgctatcccg
attaaattaaagccaaagttgattgaaagtttagaagaaaggcggagtgcagtgaaaata
ggtgctgccgatatagcagcacagcaactttcatataatgttatgtcaatggcagcactc
gctggtgctgcaacaatgttacattgtcttcctccatctccacaacctcttaacccattg
ataaaaccattaatggaagctattaaacgtgaagaaaatgaagaactacaaaaactggct
gcaaagcatttgtcgtatttagttgatctctgtgtagatagaaaacctactcctaatgca
aagatatcgaccaatttatgtacattcctatgctcggacactgaatttacacctcgtgta
aattgtaatacaaacacaaatctatttgacggaattcttactttaagcaatagacagaaa
catgctgaaagaatagcttataatcggggaaccaacagcggacttagtggaggcagaggg
cctggccggccaccaacaactgaaattcctttattagaactacttgcttatgaagaacct
gaagctaaggctgatagaacacgtcgtcgcggagctactttagcacttaccgctatagct
actctatttggtgcacaattacctacacgtttaccgcatctttgggaactaatattacca
aacgtattacaagaaaaagacaaaatcggtagtcgtgaaaatattgaagaagaagtaaat
cagttaatttttggtttacaagttttagaagttatggctcccagccttcataaagcctta
ctgcctcctgtcctagagtgcctttcattcttatgtgaattattggctcatccttacaaa
gctgtcagacacatggcatccagatgtatagctgtattagctacattagatacagagaag
ataataatgcaggttacaagccgtgtaataccacttctagaatcaactggtggagagaaa
atatactcagcgactgtaacagcaccaagcgaagtagattcagtaaaacaaggcgcagct
gaagcgttagcgtgtcttgtcgaaagtttaggtgttaatatcgttccatacgctgtgctg
tttatggttcctttgcttgggcgtatgagtgatcaaaatcaggctgtaagattagcttgt
agtgttacgttcgcaacactcgtgcaacttttgccccttgatcctggtgcgattacggat
ccaccagatttaatagaaaagaaaacacaagaatggcgattcttagaacaacttttgaat
ccacaaagtatcccagataccgtattaccgattccagtatctgcagagttacgttcttat
caacaacaaggcttaaattggttaaatttcttgaatcgttatcgacttcatggtgtttta
tgcgatgacatgggccttggaaaaactttacaaactctttgtatactagctttagatcat
catcgtaatcctcgtgccccaccaagcttggtagtgtgtccgccaactctaactggtcat
tgggtgtatgaggcagaaaagttcttcaaaaccaaagatctctcagtgttacaatatgtt
ggcaccccacctgagcgtgaaaaattacgtccaatggttacttatcacaaactcatcgtt
gcaagttatgaaataatgcgtaaggatatcgattatttcgaaacatgtcaatggaactac
tgtgtgctcgatgaaggtcacattattaaaaatggaaagacaaaaagtgctaaggcaact
aagcgattacatgcgaatcatagacttatactttcgggaacaccaatacaaaacgatgta
cttgaattatggtccttgtttgactttttaatgccaggtttcctgggtactgagaaacaa
tttgcggcaaagtactcacgtcctatactagcctgtagggaaccaaaagctggcccaaaa
gaacaagaggcgggagctttagcaatggaagcacttcatagacaagttttgccattctta
cttagacgaaataaagaagatgtcctcaaagatttaccaccaaaaattacacaagactat
tattgcgacttatcgtcattacaacgtacgctatacgaagatttccatactcgacgttct
gtcactttattatccgctacgtcgtgcacttcaactggaaataatggttgtagtgtcttt
gaagcattacgatatctgcgtaatgtttgtaatcatcccaaattagtattaaatccacga
catccgttatacgctactgtgtgtaatacattgaaacaacgaaagagcacattagccgag
atagaatatgcagccaagttacctgcattaaaacaattattattagattgtggcatagga
cagccacagcgacaacaaaaccgcaattctgtaactactgatggtacatcagataatcaa
ccaccgcaggagcaacagttagtgagccaacatcgagctttaattttttgtcaattgaaa
gcaatgctagatatcgtggaaaaagatcttctttgtgcacatttacctactgttacatat
cttcgtctcgatggaagtgtacaaactacgcaaaggcattccatagtaacacgttttaac
gcagacccatccatagacgtgcttctgttaacgactcaagtcggtggtcttggattaaat
ctaactggcgctgacactgttatattcgtggaacatgactggaatcctatgaaagatctt
caagcgatggatcgagcacatcgtattggtcaaaaaaaagtagtgaacgtatacaggtta
atcacaagatcgacagtagaggaaaagatcatgggactgcagaaattcaaacttcttaca
gcaaataccgtaatttcaacggaaaatgcatctctagaaacaatggcaactgatcagcta
cttgacttgtttacattggacgatggcaaagagaaaaaatcagaaatacaagatgatgcc
acgtctaaaattagtgaggttccaggcattagccgttctgttttagaaattctccctgaa
ctatgggaacaacaacaatatgacgatgaatatgacattcagtcatttctatctacttta
aagtga
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