KEGG   Bombus pascuorum (common carder bee): 132904834
Entry
132904834         CDS       T09597                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
bpas  Bombus pascuorum (common carder bee)
Pathway
bpas03030  DNA replication
bpas03410  Base excision repair
bpas03420  Nucleotide excision repair
bpas03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bpas00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    132904834
   03410 Base excision repair
    132904834
   03420 Nucleotide excision repair
    132904834
   03430 Mismatch repair
    132904834
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bpas03032]
    132904834
   03036 Chromosome and associated proteins [BR:bpas03036]
    132904834
   03400 DNA repair and recombination proteins [BR:bpas03400]
    132904834
DNA replication proteins [BR:bpas03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    132904834
  DNA Replication Termination Factors
   ELG1-RFC complex
    132904834
Chromosome and associated proteins [BR:bpas03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    132904834
DNA repair and recombination proteins [BR:bpas03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     132904834
  Check point factors
   HRAD17(Rad24)-RFC complex
    132904834
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 RCF1-5-like_lid AAA_14 AAA_lid_RFC1 Rad17 AAA_16 nSTAND_NTPase5 Mg_chelatase Viral_helicase1 AAA_11 AAA_19 RuvB_N nSTAND3 AAA_assoc_2 AAA_24 AAA_18 AAA_28 DEAD AAA_5 NTPase_1 ABC_tran MeaB DNAX_ATPase_lid MipZ AAA_23 AAA_2 AAA_29 RNA_helicase AAA_25 AAA_3 AAA_30
Other DBs
NCBI-GeneID: 132904834
NCBI-ProteinID: XP_060811582
LinkDB
Position
3
AA seq 351 aa
MGVEKIVDEPMNVEALPSTSGYNVKNKEKDKKSGNLPWIEKYRPQIFSDIVGNEDTVSRL
SVFAEHGNCPNIIIAGPPGVGKTTTILCLARILLGPAFKEAVLELNASNERGIDVVRNKI
KMFAQKRVNLAKGKHKIIILDEADSMTDGAQQALRRTMEIYSNTTRFALACNTSEKIIEP
IQSRCAMLRYGKLSDAQILAKIIEVCKKEDVSHTDDGLEAIVFTAQGDMRQALNNLQSTY
NGFGHVNSENVFKVCDEPHPLLVKEMLELCAQGKISKAYGIMEHLWKMGYSAEDLISNIF
RVCTNLSIEEPLKLDFIKEIGITHLGIVDGINSLLQMNSLLARLCQKAMQK
NT seq 1056 nt   +upstreamnt  +downstreamnt
atgggagttgagaaaattgtcgatgagcctatgaatgttgaagctttaccatcgacgagt
ggttataatgtaaaaaataaagaaaaagataagaaatcaggcaatttgccatggattgaa
aaatatcgaccacaaatattttctgacattgttggtaacgaagacacagtatccagatta
tctgtatttgctgaacatgggaactgtcctaatatcatcattgctggaccaccgggagtt
ggtaaaactacaactatattatgtttggcacgtattttattaggaccagcgtttaaggaa
gcagtattagaattaaatgcttcaaatgagagaggaatagatgtcgtcagaaataaaatt
aaaatgtttgcccaaaagagggtaaatttggcaaaaggaaagcacaaaataataattcta
gatgaagccgatagcatgactgatggtgcacaacaagcattacgtaggacaatggagata
tatagcaatacaactaggtttgcactagcttgtaacacaagtgaaaaaattatcgagcca
atacagtcacgctgtgccatgttaagatatggaaaattatcagatgcacaaattttagca
aagattattgaagtttgtaagaaagaagatgtttcacatacagatgatggtttagaagca
atagtatttactgcacagggtgatatgagacaggctctaaataatttacaatcaacttat
aatggttttggacatgtaaacagtgagaatgtttttaaagtctgtgacgaaccgcatccg
ttacttgttaaagaaatgttggaattatgtgcacagggtaaaatttccaaagcatatggg
ataatggaacatttatggaaaatgggatattctgcagaagatttgatcagtaatatattt
agagtttgtacaaatctatccatcgaagaaccattaaaattagattttataaaagagatt
ggaataactcatctaggaatagtggatggaattaatagtttactacaaatgaacagtctt
cttgctagactttgtcaaaaagctatgcagaaataa

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