Bombus pascuorum (common carder bee): 132905034
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Entry
132905034 CDS
T09597
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
bpas
Bombus pascuorum (common carder bee)
Pathway
bpas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132905034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpas03019
]
132905034
03012 Translation factors [BR:
bpas03012
]
132905034
Enzymes [BR:
bpas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
132905034
Messenger RNA biogenesis [BR:
bpas03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
132905034
Translation factors [BR:
bpas03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
132905034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
AAA_22
nSTAND3
ResIII
ATPase
AAA_14
AAA_19
PhoH
NACHT
AAA_16
NB-ARC
T2SSE
ABC_tran
Sigma54_activat
RsgA_GTPase
SRP54
AAA_23
Motif
Other DBs
NCBI-GeneID:
132905034
NCBI-ProteinID:
XP_060811935
EnsemblRapid:
ENSBPAG00000017605
LinkDB
All DBs
Position
3:complement(9627865..9632511)
Genome browser
AA seq
977 aa
AA seq
DB search
MSHPYGLFSAQRMYSRRRHGDRGESSQSGGSHFERDSRGRGRGGGHPPWLRGKEIGLYYR
DKAKEKTKKKETRVIKLPGHLQEKIEHVLDNSKGYYEKLYNNAYTEDTYGVLEDKYVHIR
DSQFKRKFMNMVSGNMQENLARALLVKSKLEKDIAVDKKLLNEYRSMQSTQEYENMKQFR
LKLPSYHKRSRILDLIKENQVIVISGETGCGKTTQVAQYILDDQLEQENGSTVRIICTQP
RRISAISVAERVAAERAERLGKSVGFQIRLEKVLPRDRGSITFCTTGMLLQFMQGDPALK
EFSHIILDEIHERSTESDFILALLKLIISKRPDLKVILMSATLNSERFSSYYDDCPMIHI
PGFTYPVTEFYLEDILSFTEYQFPASAAIPQDHRKHIKKYKQEQRKRDEFHDVLYPYVRQ
LIATKKYSKEVIEQLRNPNSEKLSLDLIEQLIRYICKTKDPGAILVFLPGMMDIIKLHKI
MLENRQYPQNQYVIYPLHSRMPTVDQKLVFRTPAEGVRKIIIATSIAETSITIEDVVYVI
DCGKMKFGKFDLQKNVQTLEPEWVSLANAKQRRGRAGRVKAGVCYHLYSKAREMALDQYP
LPEMLRTRLEEVILQIKVLQLGKARTFLASVMDPPNMKAIDLSLDLLRTLNALDDEEQLT
PLGYHLAQLPLDPRTGKMIIWASLFSCVEPVFAIAASLSFKDAFYCPLGKEEDARKKKLE
LNMNQFSDHIALSEALRRFEIAYKKSYASSFCREYFLSFSTLKLLSEMKTQFAQHLYEMK
FMNSENPADINANRNSSNITLVKAVVCAALYPNIAIIRRVTKNGTRAWTPEDGSVTIHPS
SVNDRVREYPNPFITYFTKQLSTAIYLHDTTCISAPILLFTAPKMSIRKERGNYFINLAN
NQMFACDLQSAQLIQKLQEQFNNMLEYKITHPGIVCWNGFEGDVLNAIIELVSQKDEELG
FSDSDIKNCEDDIHDKV
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgtcccatccttacggactattttcagcacaaagaatgtattcgagacgtagacatgga
gacagaggtgaaagttctcagtcaggagggtcacattttgaacgtgatagccgtggacga
ggcagaggaggaggacatccaccttggttgagaggcaaagaaatagggctttattataga
gataaggccaaagaaaagaccaagaaaaaggaaactcgagttattaagttacctggacat
cttcaagaaaaaattgaacacgtgttagacaattctaaaggatattatgaaaaattatat
aacaatgcatacactgaagatacgtatggtgtgttagaagataaatatgtgcacattcgt
gactcccaatttaaaagaaaatttatgaacatggtatctggtaatatgcaagaaaatctt
gctagagctttgctggttaaatcaaaattagaaaaagatattgcagtagataaaaaatta
ttaaatgaatataggtcaatgcaatcaacgcaggagtatgaaaacatgaaacaatttaga
ttaaaattaccatcatatcataaaagatcaagaatattagatttgattaaggaaaatcaa
gttattgtaataagtggagaaactggttgtggaaaaacaacacaagttgctcagtatata
ttggatgaccaactagaacaagaaaatggtagcactgtgcgaattatatgcactcaacct
aggaggatatcagctatatccgttgctgaaagagttgcagctgagagagcagagaggctt
ggtaaatccgttggttttcaaatccggcttgaaaaagtattaccgagagatagaggcagc
ataacattttgtactactggaatgttattgcaatttatgcaaggtgatccagccttaaaa
gaattttctcatattatattagatgaaattcatgaaagatctaccgaaagtgactttatc
cttgctttactgaagctaattatctctaaaagaccggatttgaaagttattttaatgagt
gcaacacttaactctgaaagattttccagttattatgatgattgcccaatgattcatatt
cctggctttacttatccagtaacagaattttatttagaggacatcctatcctttacagaa
tatcaatttcccgcatcagctgcaatacctcaagatcatagaaaacatatcaaaaaatat
aaacaagaacaacgaaaaagggatgagtttcatgatgtactatatccttatgtacgacag
cttatagctacgaagaaatattcaaaagaagtaattgaacaattacggaatccaaacagc
gagaaattgtctcttgatcttatagaacaattaattaggtacatttgtaaaactaaagat
cctggagctattttagtttttcttcctggtatgatggatataataaaactacataaaatt
atgctggaaaatagacagtatccacaaaatcaatatgttatttatcctcttcattctcgt
atgccaactgtcgatcagaagctcgtttttagaacaccagctgaaggagttcggaagata
ataattgcaacttcgatagccgaaacttctataactattgaagatgtagtatatgttatt
gattgcggaaaaatgaaatttggtaaatttgatctccaaaaaaatgttcaaactttggaa
cctgaatgggtatcgttagctaatgctaaacaaagaagaggtagagcaggcagagtaaaa
gctggtgtctgttatcatttgtactcaaaagctagagaaatggcactagaccagtatcct
ttacctgaaatgttaaggacgcgtttagaggaagttattttacaaataaaagtgttacaa
ttgggaaaagctagaactttcctagcaagtgttatggatcccccaaatatgaaagctata
gatctatctttggatttactccgaactctcaacgcgttagatgacgaagaacaattgact
cctttgggttatcatttggctcaattacctctagatccacgaacagggaaaatgatcata
tgggcatcattattttcgtgcgtagaaccagtttttgcaatcgcggcaagtcttagtttt
aaagatgctttttactgtccacttggaaaagaggaagacgcacgaaaaaagaaactcgaa
ttaaatatgaatcaatttagcgatcatatcgcgttatctgaagcattaagaagatttgag
atcgcgtataaaaaaagttatgcaagttctttttgtagggaatatttcctctctttcagt
acgctcaaactactttctgaaatgaaaactcaatttgctcaacatttgtatgaaatgaaa
tttatgaactcagaaaatcccgctgacattaatgctaacaggaactccagtaacataacc
ttagtgaaagcagtagtatgtgctgcattatatcctaatattgctattataaggagagtt
acaaaaaatggaaccagagcatggactccagaagatggcagcgttactatacatccgtca
agtgtaaatgatagagttagggaatatcccaacccatttattacgtattttacaaagcaa
ctttcgacagcgatatatttgcatgatactacatgcattagcgcgccaattttattattt
actgctccaaaaatgtctataagaaaagaaagaggaaactattttatcaacttagcaaac
aatcaaatgtttgcttgcgatttacaaagtgcacaacttattcagaaattacaagaacaa
ttcaataatatgttagagtataaaataacacatccgggaatagtatgctggaatggtttt
gaaggcgatgtattaaatgctatcatagaattggtttctcaaaaagacgaggaattggga
ttttctgattctgatattaaaaattgtgaggatgatatacatgataaagtttga
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integrated database retrieval system
