KEGG   Bombus pascuorum (common carder bee): 132905035
Entry
132905035         CDS       T09597                                 
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
bpas  Bombus pascuorum (common carder bee)
Pathway
bpas03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bpas00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    132905035
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bpas03041]
    132905035
   04121 Ubiquitin system [BR:bpas04121]
    132905035
Spliceosome [BR:bpas03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    132905035
 Complex C
   U4/U6.U5 tri-SnRNP specific factors
    132905035
Ubiquitin system [BR:bpas04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    132905035
SSDB
Motif
Pfam: SART-1 HIND COG6_N
Other DBs
NCBI-GeneID: 132905035
NCBI-ProteinID: XP_060811936
LinkDB
Position
3:9297031..9301549
AA seq 744 aa
MGSNKRHKTEKSRDAKKKRHRSRSRSYTPEREKSEKHRHHKKHRRKERKDYDSDVEIVNA
PPPPKISKSSHPSTPPPPEISKQHSPSPSKGGGTQTSLSIEETNKLRAKLGLKPLEVDSG
PKDDPNKIKDDLGEFYHKPAPDVNEKLKTQKLKEKIGTQKQKRLIEANLAKVKSLGECDS
DDDTRNWIDKTRRLEEEKKKAEERAKMLDQLDEEFGIGNLVKEEIHAARNTAYTEKNLKG
LKVEHNIEKFEEGKTLVLTLKDRQVLEEGEDVLVNVNITDEERYQRNIFNKTKKPGYDAY
DDDNFDEFGFPKKTILEKYDEEIGGAKKDTFTLGINNIKDVKQNKLDYVKQRLANKRLES
LQLTEPKLASEYYNEEELAKFKKPKKKVRKIRKKLKAEDLIPEDNDYLRDLGSRRAKKTE
DVKENDVLDVDDLGAPTEDLSGIKLEEDDKELELQLALKKAQKLKESQLSNIEKVVETIK
QESMGSEESQSGNIVLNATAEFCRTLGDIPTYGLAGNREENGQELMDFEMDGVKEEPPAN
EDEDDGRGAWNTVHLDESTSEPVAMEAAILDAEPSLGHGVGGALKLAMSKGYLQKEDSSR
PSASRFAHLQAQNYSIEDKTYGDDDKFGRRDRFNGPTSEFKEKDGFKPNVKLEYIDDDGH
VLSAKEAFRYLSHKFHGKGPGKNKVEKRMKKAEQEVLMKRMSSTDTPLGTLNLLQAKQKE
TQSPYIVLSGSKQMQTTSISKSKH
NT seq 2235 nt   +upstreamnt  +downstreamnt
atgggctcgaataaacgacataaaaccgagaagagtcgggacgctaagaagaagcgtcac
cgtagccgttcacgaagctacacgcctgaacgcgagaaatcggaaaaacacaggcatcac
aaaaagcatagaagaaaagaacgcaaggattatgatagtgatgttgaaatagttaatgca
cctccacccccaaaaatttctaagtcttcacatccgtcaacgcctccacctcctgaaatc
tctaagcagcacagcccttcaccaagcaaaggcggtggaacacaaacatctctatcgatt
gaagaaactaacaaattaagagcaaagttaggtttaaaaccattagaagttgatagtgga
ccaaaagatgatcctaataagattaaggatgacttgggagagttttatcacaagcctgct
cctgatgttaacgaaaagttaaaaacccaaaaattaaaggaaaagattggcactcagaaa
cagaagagactaattgaggctaatttagctaaagtaaagagtttaggtgaatgtgattct
gatgatgataccagaaattggattgataagaccagacgtttagaggaagagaagaaaaaa
gcagaagaaagggcaaaaatgttagatcagttagatgaagaatttggaattggaaatttg
gttaaagaagaaattcatgctgcacgtaatacagcttatactgaaaaaaatttaaagggc
ctcaaagtggagcacaatattgagaaatttgaagaaggcaaaacacttgtcttaacgcta
aaagatcgacaagtactagaagaaggcgaagacgtgcttgttaacgtaaatataactgat
gaggaacgttatcaacgtaatattttcaataaaacgaagaagcctggttacgatgcatac
gatgacgataacttcgatgaattcggtttcccaaagaaaacaattttggaaaaatatgac
gaagagattggaggagcgaaaaaagacactttcacactgggaattaataacatcaaagac
gtgaagcagaataaactcgactacgttaaacaacgtttagccaataaacgattagaatca
ttacaattaacagagccaaaactagctagtgaatattataatgaagaagaacttgcgaaa
tttaagaagccaaagaaaaaggttcgaaagattagaaagaaattaaaagcagaagattta
attcctgaagacaatgattatcttcgagatcttggaagtaggagagccaaaaaaaccgaa
gacgtaaaagaaaacgatgttttggacgtagatgatttgggagctcccactgaagatctc
agtggaataaaattggaagaagatgacaaagagttggaactacaattagcattgaagaag
gctcaaaaactaaaagaatcccaattatcaaatatcgaaaaggtagttgaaactataaaa
caagagtctatgggatctgaagagagtcaatctggaaatattgttcttaacgccactgca
gagttttgtagaacactaggagacattcctacttatggtcttgctggaaacagagaagaa
aatggacaggagttgatggactttgaaatggacggagtcaaagaggaacctcctgcaaac
gaggatgaagatgacggccgtggcgcatggaatactgtgcatctagatgaaagtacatca
gaaccagtagcaatggaagccgccattttagatgcagaaccttcgctcggacatggcgta
ggtggagcgttaaaacttgctatgagcaaaggttatttgcaaaaagaagatagtagtaga
ccatctgcgtctcgtttcgcacatctacaagctcagaattactcgatagaggacaagact
tatggagacgatgataaatttggtagaagggatcgtttcaatggtccaacgtcagaattc
aaagagaaggatggtttcaaaccaaatgttaaactggaatacatcgatgacgatggtcat
gttttaagtgcaaaggaagcttttcgatatctctcacataaatttcatgggaaaggtcca
ggaaaaaataaggttgagaaacgaatgaaaaaagcagaacaagaagttttaatgaaacga
atgtcatctacggatacccctctaggaacgcttaatttattacaagcaaaacaaaaagaa
actcagtcgccatatatagtactcagtggaagcaaacaaatgcaaacgactagcatatcg
aagtcaaagcattaa

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