KEGG   Bombus pascuorum (common carder bee): 132905226
Entry
132905226         CDS       T09597                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7 isoform X1
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
bpas  Bombus pascuorum (common carder bee)
Pathway
bpas03020  RNA polymerase
bpas03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bpas00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    132905226
  09124 Replication and repair
   03420 Nucleotide excision repair
    132905226
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bpas03021]
    132905226
   03019 Messenger RNA biogenesis [BR:bpas03019]
    132905226
   03400 DNA repair and recombination proteins [BR:bpas03400]
    132905226
Transcription machinery [BR:bpas03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     132905226
Messenger RNA biogenesis [BR:bpas03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     132905226
DNA repair and recombination proteins [BR:bpas03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      132905226
SSDB
Motif
Pfam: SHS2_Rpb7-N S1
Other DBs
NCBI-GeneID: 132905226
NCBI-ProteinID: XP_060812292
LinkDB
Position
3:complement(605293..607129)
AA seq 186 aa
MFYHISLEHEILLHPRYFGPQLLDTVKQKLYTEVEGTCTGKYGFVVAVTTIDNIGAGIIQ
PGQGFVVYPVKYKAIVFRPFKGEVLDAIVTQVNKVGMFAEIGPLSCFISHHSIPADMQFC
PNINPPCYKSKEEDVIIQPDDEIRLKIVGTRVDATGIFAIGTLMDDYLGKYLFYQPIDFL
QYYSFP
NT seq 561 nt   +upstreamnt  +downstreamnt
atgttttatcatatatcgttagaacacgaaattttattacaccctagatactttggacct
caattattagatacagtgaaacaaaaactgtatactgaagtagaaggcacctgtacagga
aaatatggtttcgtagttgctgtaacaacgatagataatatcggcgcagggatcatacag
ccaggacaaggttttgttgtgtatcctgttaaatacaaggccattgtatttaggccattt
aaaggagaagtattagatgctatagtgacacaagtaaacaaggttggaatgtttgctgaa
atagggccactttcatgttttatatcgcaccattcaattccagcagatatgcagttttgt
ccgaatatcaatccaccatgctacaaatctaaagaagaggatgtaattattcaaccagat
gatgaaataagattaaaaattgtgggcacaagagtcgatgcaacaggaatttttgctatt
ggaacattgatggatgattatctgggtaaatatttattttatcagcctattgatttctta
caatattattcatttccataa

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