Bombus pascuorum (common carder bee): 132905273
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Entry
132905273 CDS
T09597
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
bpas
Bombus pascuorum (common carder bee)
Pathway
bpas03030
DNA replication
bpas03410
Base excision repair
bpas03420
Nucleotide excision repair
bpas03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
132905273
03410 Base excision repair
132905273
03420 Nucleotide excision repair
132905273
03430 Mismatch repair
132905273
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpas03032
]
132905273
03400 DNA repair and recombination proteins [BR:
bpas03400
]
132905273
DNA replication proteins [BR:
bpas03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
132905273
DNA repair and recombination proteins [BR:
bpas03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
132905273
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA
BRCT
BRCT_2
AAA_22
AAA_14
AAA_30
RuvB_N
RNA_helicase
PTCB-BRCT
AAA_19
AAA_assoc_2
AAA_33
AAA_5
AAA_7
AAA_16
Viral_helicase1
Motif
Other DBs
NCBI-GeneID:
132905273
NCBI-ProteinID:
XP_060812407
LinkDB
All DBs
Position
3:complement(8476908..8482861)
Genome browser
AA seq
1051 aa
AA seq
DB search
MPRDIRSYFQTIKTNSNVAPAKATKKRIIISSDEDEDKSQSPRKRPKKTKLLEKKTTKSD
SEEDIKIISPADMFGKNPVNRQEAAKISRQSLKQKAEEVPKISKKLQKKEAEGHNDDDFE
ATLRQLDTSDIEQRYLTEIKANEDTNLHESNIENKEKTPIKNKEDVKKKMRPDKTNQEKG
NKKHEPKNKKHSNNISDEDIKHKGSENSGKFKHTKKSSKTSSDISEMEVEYPKEKKEASP
KKIDTSDVYEERIEKKKQNAAMYQQYLQRGGARNPGSKEIPVGAEQCLTGLSFVITGVLD
SLEREEAEELIKQYGGRILHQISKKTDYVIVGDQAGPAKLSKATNLNIKKISEDDLLELI
RTKPAGQSDNVTQPRTKSKERSKRKSAESSEESTPKKKKITVNEETKKAAKIHSPHKSES
SKKEMEDLLKQKLYNKDEKIKSSIEKKQNEHKESLVQDKKEIIDVKDIKIQTNTLQDING
NTPVQALVEKYRPKTMKQILGQQGDKSNAKKIYAWLMNWHKNQSGQVKYTRPSPWAKDDN
GAFFKAALLSGPPGIGKTTTVQVVCNELGFDLIEFNASDTRSKKLLQEEVSELLSNTTIK
NYFKDIKSKPSSKHVLLMDEVDGMAGNEDRGGLQELINLIKSTDIPIVCICNDRNNPKMR
TLSNYTFDLRFPKPRLEQIRGAMKSMCFKENIQISNEDLDRLIESTNQDIRQVINHLALF
VGQTGSQEKNEKKHINKDLRLGPWDVVKKVFSVEEHKHMSINDKSNLFFHDYNIAPLFVQ
ENYLMVIPQVPKNELLGRVAESAESIALGDVVEKSIRSNNAWSLLPIQAYYSSVIPGTAM
SGHIGGQINFPAWLGRNSKTGKLNRLMQEITSHARLATGASKEAINLDYIRPLRDTILRP
LAVGGIENVDAAIDVMNQYHLLREDLDSLVEISLWPGDRDPFQIIDSKVKAAFTRAYNKN
SVALPYIVSATSKKKVTSSIQEEGFLEEEEEEIDSDQNDDNIDADKMIKAKKTGTNKNIE
SKGKNTDKTEKKGKNSSDKSNKRGRGRGKAK
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgccaagggatatacgatcctattttcaaactattaaaacaaattccaatgtcgctcca
gcgaaagctaccaaaaaacgaattattatttcgtctgacgaagatgaggacaaatcccaa
tcgccacgtaaacggcccaagaagacaaagttattggagaagaaaactactaaatctgat
tccgaagaagatatcaaaatcatttctcctgctgatatgtttggtaaaaatccagtaaac
agacaagaagcagctaagatatctagacagtcattaaagcagaaagctgaagaagtacct
aagatatctaaaaagttacaaaagaaggaggctgaaggtcataatgatgatgattttgaa
gctaccttacgtcagttagatacatctgatattgagcagagatatttaacagagattaaa
gctaatgaagatacaaatttacatgaaagcaatattgaaaataaagaaaagacacccatt
aaaaataaagaggatgttaaaaagaaaatgagacctgataaaacaaatcaagaaaaaggt
aataaaaaacatgaaccaaagaataaaaaacattctaataatatttcagacgaggacatt
aagcataagggttctgaaaatagtggcaaatttaaacatacaaagaaatcttctaaaact
tcatctgatatttctgagatggaagtagaatatccgaaagaaaaaaaggaagcttctccc
aaaaagatagacacttctgatgtatatgaggaaaggattgaaaagaaaaaacaaaatgct
gcaatgtatcagcaatatcttcaaagaggaggagccagaaatccaggctcaaaagaaatc
cctgttggtgctgaacagtgcctaacaggattaagttttgtaataactggcgttttggat
tctttagaaagagaggaagctgaagaacttattaaacaatatggtggacgaattttacac
caaatttcaaagaagactgactatgttatagtaggtgaccaagctggtcctgcaaaactg
tcaaaggctaccaacttaaacataaagaaaatatcagaagatgatttgcttgagttgata
cgtacaaagcctgcaggtcaaagtgataatgtaacacaacctcgtacaaaatcaaaagaa
agatcaaagagaaaatctgcagaatctagtgaagaatcaacaccaaagaagaaaaaaatt
actgtaaacgaggaaacgaaaaaagcagcaaaaatacattcaccacataaaagcgagagt
agtaaaaaagaaatggaggacttattaaaacaaaaactttataataaagatgaaaaaata
aaatcttcaattgaaaagaaacagaatgaacataaagaatcgcttgtacaggataaaaaa
gagataattgatgtgaaagatataaaaatacaaacaaatactttgcaagatataaatggg
aacacaccagtgcaggcattggttgaaaaatataggccaaaaactatgaaacaaattttg
gggcaacaaggggacaaaagtaatgctaagaaaatatatgcttggttaatgaattggcat
aaaaatcaaagtggtcaagtaaaatatacaagacctagtccctgggcaaaagatgataat
ggagcttttttcaaagctgctttgttatctggtcctcctggaattgggaaaaccacaact
gtccaagttgtctgtaatgaattaggttttgatcttatagaatttaatgcatcagatacc
agaagtaaaaaacttctgcaagaggaagtatcagaacttttatctaataccacaataaaa
aattatttcaaagatattaaaagtaaaccatcatcaaaacacgtattgttaatggatgaa
gtagatgggatggctggtaacgaggatcgcggtggtctacaggaattaattaatttgatc
aaatcaactgatatacctattgtttgtatttgcaatgatcgaaataatcctaaaatgaga
acgctttctaattatacatttgaccttcgatttccgaaacctagattggaacaaattagg
ggtgcaatgaaatctatgtgttttaaagaaaatattcaaatttcgaatgaagatctcgat
cgtttaattgaatcaactaatcaggatattcgtcaagttataaatcatttggcattattt
gttggacaaactggttctcaggaaaaaaatgaaaagaaacatataaataaggatttgaga
ctaggtccttgggatgttgtaaaaaaagtattttccgtagaagaacataaacatatgagt
ataaatgacaagagtaacttatttttccatgattacaatatagcaccattatttgtacaa
gaaaattatttaatggttatacctcaagtgccaaaaaatgaattgttaggaagggtagca
gaaagtgctgaaagtatagcattaggagatgtagttgaaaaatccataagaagtaataat
gcttggtctcttttaccaatacaagcttattattcttctgtgatacctggaacagcaatg
tctggtcacattggtggccaaattaattttccagcttggcttggacgtaattcaaaaact
ggtaaacttaatcgcttaatgcaggaaatcacttcacatgcacgtttggctacgggtgcg
agtaaggaagctataaacttggactacattagacctcttagagatactattctcaggcct
ttagcagttggaggtattgaaaatgtagatgcagcaattgatgttatgaaccagtatcat
ttactcagggaagatctagattcattggtagaaatttctctatggcctggcgatcgtgat
ccgtttcaaattatagatagtaaggtgaaagctgcttttacaagagcatataataaaaat
tccgtggctctaccttatatagtgagtgcaacatcaaagaaaaaagtaacgtcaagtata
caagaagaaggtttcttagaagaggaggaagaagaaattgactctgatcaaaatgacgat
aacattgatgcagataagatgattaaggcaaagaaaactggtacaaacaagaatattgaa
tcaaagggtaaaaatactgataaaactgagaagaaaggcaaaaatagtagtgataagtct
aataaacgtggaagaggacgggggaaagcaaaataa
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