KEGG   Bombus pascuorum (common carder bee): 132905273
Entry
132905273         CDS       T09597                                 
Name
(RefSeq) replication factor C subunit 1
  KO
K10754  replication factor C subunit 1
Organism
bpas  Bombus pascuorum (common carder bee)
Pathway
bpas03030  DNA replication
bpas03410  Base excision repair
bpas03420  Nucleotide excision repair
bpas03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bpas00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    132905273
   03410 Base excision repair
    132905273
   03420 Nucleotide excision repair
    132905273
   03430 Mismatch repair
    132905273
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bpas03032]
    132905273
   03400 DNA repair and recombination proteins [BR:bpas03400]
    132905273
DNA replication proteins [BR:bpas03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    132905273
DNA repair and recombination proteins [BR:bpas03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     132905273
SSDB
Motif
Pfam: RFC1 AAA BRCT BRCT_2 AAA_22 AAA_14 AAA_30 RuvB_N RNA_helicase PTCB-BRCT AAA_19 AAA_assoc_2 AAA_33 AAA_5 AAA_7 AAA_16 Viral_helicase1
Other DBs
NCBI-GeneID: 132905273
NCBI-ProteinID: XP_060812407
LinkDB
Position
3:complement(8476908..8482861)
AA seq 1051 aa
MPRDIRSYFQTIKTNSNVAPAKATKKRIIISSDEDEDKSQSPRKRPKKTKLLEKKTTKSD
SEEDIKIISPADMFGKNPVNRQEAAKISRQSLKQKAEEVPKISKKLQKKEAEGHNDDDFE
ATLRQLDTSDIEQRYLTEIKANEDTNLHESNIENKEKTPIKNKEDVKKKMRPDKTNQEKG
NKKHEPKNKKHSNNISDEDIKHKGSENSGKFKHTKKSSKTSSDISEMEVEYPKEKKEASP
KKIDTSDVYEERIEKKKQNAAMYQQYLQRGGARNPGSKEIPVGAEQCLTGLSFVITGVLD
SLEREEAEELIKQYGGRILHQISKKTDYVIVGDQAGPAKLSKATNLNIKKISEDDLLELI
RTKPAGQSDNVTQPRTKSKERSKRKSAESSEESTPKKKKITVNEETKKAAKIHSPHKSES
SKKEMEDLLKQKLYNKDEKIKSSIEKKQNEHKESLVQDKKEIIDVKDIKIQTNTLQDING
NTPVQALVEKYRPKTMKQILGQQGDKSNAKKIYAWLMNWHKNQSGQVKYTRPSPWAKDDN
GAFFKAALLSGPPGIGKTTTVQVVCNELGFDLIEFNASDTRSKKLLQEEVSELLSNTTIK
NYFKDIKSKPSSKHVLLMDEVDGMAGNEDRGGLQELINLIKSTDIPIVCICNDRNNPKMR
TLSNYTFDLRFPKPRLEQIRGAMKSMCFKENIQISNEDLDRLIESTNQDIRQVINHLALF
VGQTGSQEKNEKKHINKDLRLGPWDVVKKVFSVEEHKHMSINDKSNLFFHDYNIAPLFVQ
ENYLMVIPQVPKNELLGRVAESAESIALGDVVEKSIRSNNAWSLLPIQAYYSSVIPGTAM
SGHIGGQINFPAWLGRNSKTGKLNRLMQEITSHARLATGASKEAINLDYIRPLRDTILRP
LAVGGIENVDAAIDVMNQYHLLREDLDSLVEISLWPGDRDPFQIIDSKVKAAFTRAYNKN
SVALPYIVSATSKKKVTSSIQEEGFLEEEEEEIDSDQNDDNIDADKMIKAKKTGTNKNIE
SKGKNTDKTEKKGKNSSDKSNKRGRGRGKAK
NT seq 3156 nt   +upstreamnt  +downstreamnt
atgccaagggatatacgatcctattttcaaactattaaaacaaattccaatgtcgctcca
gcgaaagctaccaaaaaacgaattattatttcgtctgacgaagatgaggacaaatcccaa
tcgccacgtaaacggcccaagaagacaaagttattggagaagaaaactactaaatctgat
tccgaagaagatatcaaaatcatttctcctgctgatatgtttggtaaaaatccagtaaac
agacaagaagcagctaagatatctagacagtcattaaagcagaaagctgaagaagtacct
aagatatctaaaaagttacaaaagaaggaggctgaaggtcataatgatgatgattttgaa
gctaccttacgtcagttagatacatctgatattgagcagagatatttaacagagattaaa
gctaatgaagatacaaatttacatgaaagcaatattgaaaataaagaaaagacacccatt
aaaaataaagaggatgttaaaaagaaaatgagacctgataaaacaaatcaagaaaaaggt
aataaaaaacatgaaccaaagaataaaaaacattctaataatatttcagacgaggacatt
aagcataagggttctgaaaatagtggcaaatttaaacatacaaagaaatcttctaaaact
tcatctgatatttctgagatggaagtagaatatccgaaagaaaaaaaggaagcttctccc
aaaaagatagacacttctgatgtatatgaggaaaggattgaaaagaaaaaacaaaatgct
gcaatgtatcagcaatatcttcaaagaggaggagccagaaatccaggctcaaaagaaatc
cctgttggtgctgaacagtgcctaacaggattaagttttgtaataactggcgttttggat
tctttagaaagagaggaagctgaagaacttattaaacaatatggtggacgaattttacac
caaatttcaaagaagactgactatgttatagtaggtgaccaagctggtcctgcaaaactg
tcaaaggctaccaacttaaacataaagaaaatatcagaagatgatttgcttgagttgata
cgtacaaagcctgcaggtcaaagtgataatgtaacacaacctcgtacaaaatcaaaagaa
agatcaaagagaaaatctgcagaatctagtgaagaatcaacaccaaagaagaaaaaaatt
actgtaaacgaggaaacgaaaaaagcagcaaaaatacattcaccacataaaagcgagagt
agtaaaaaagaaatggaggacttattaaaacaaaaactttataataaagatgaaaaaata
aaatcttcaattgaaaagaaacagaatgaacataaagaatcgcttgtacaggataaaaaa
gagataattgatgtgaaagatataaaaatacaaacaaatactttgcaagatataaatggg
aacacaccagtgcaggcattggttgaaaaatataggccaaaaactatgaaacaaattttg
gggcaacaaggggacaaaagtaatgctaagaaaatatatgcttggttaatgaattggcat
aaaaatcaaagtggtcaagtaaaatatacaagacctagtccctgggcaaaagatgataat
ggagcttttttcaaagctgctttgttatctggtcctcctggaattgggaaaaccacaact
gtccaagttgtctgtaatgaattaggttttgatcttatagaatttaatgcatcagatacc
agaagtaaaaaacttctgcaagaggaagtatcagaacttttatctaataccacaataaaa
aattatttcaaagatattaaaagtaaaccatcatcaaaacacgtattgttaatggatgaa
gtagatgggatggctggtaacgaggatcgcggtggtctacaggaattaattaatttgatc
aaatcaactgatatacctattgtttgtatttgcaatgatcgaaataatcctaaaatgaga
acgctttctaattatacatttgaccttcgatttccgaaacctagattggaacaaattagg
ggtgcaatgaaatctatgtgttttaaagaaaatattcaaatttcgaatgaagatctcgat
cgtttaattgaatcaactaatcaggatattcgtcaagttataaatcatttggcattattt
gttggacaaactggttctcaggaaaaaaatgaaaagaaacatataaataaggatttgaga
ctaggtccttgggatgttgtaaaaaaagtattttccgtagaagaacataaacatatgagt
ataaatgacaagagtaacttatttttccatgattacaatatagcaccattatttgtacaa
gaaaattatttaatggttatacctcaagtgccaaaaaatgaattgttaggaagggtagca
gaaagtgctgaaagtatagcattaggagatgtagttgaaaaatccataagaagtaataat
gcttggtctcttttaccaatacaagcttattattcttctgtgatacctggaacagcaatg
tctggtcacattggtggccaaattaattttccagcttggcttggacgtaattcaaaaact
ggtaaacttaatcgcttaatgcaggaaatcacttcacatgcacgtttggctacgggtgcg
agtaaggaagctataaacttggactacattagacctcttagagatactattctcaggcct
ttagcagttggaggtattgaaaatgtagatgcagcaattgatgttatgaaccagtatcat
ttactcagggaagatctagattcattggtagaaatttctctatggcctggcgatcgtgat
ccgtttcaaattatagatagtaaggtgaaagctgcttttacaagagcatataataaaaat
tccgtggctctaccttatatagtgagtgcaacatcaaagaaaaaagtaacgtcaagtata
caagaagaaggtttcttagaagaggaggaagaagaaattgactctgatcaaaatgacgat
aacattgatgcagataagatgattaaggcaaagaaaactggtacaaacaagaatattgaa
tcaaagggtaaaaatactgataaaactgagaagaaaggcaaaaatagtagtgataagtct
aataaacgtggaagaggacgggggaaagcaaaataa

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