Bombus pascuorum (common carder bee): 132905319
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Entry
132905319 CDS
T09597
Name
(RefSeq) rootletin isoform X1
KO
K16469
rootletin
Organism
bpas
Bombus pascuorum (common carder bee)
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
bpas03037
]
132905319
Cilium and associated proteins [BR:
bpas03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
132905319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rootletin
Laminin_II
ATG16
PUMA_CC
Motif
Other DBs
NCBI-GeneID:
132905319
NCBI-ProteinID:
XP_060812473
LinkDB
All DBs
Position
1:13819376..13835322
Genome browser
AA seq
1972 aa
AA seq
DB search
MSRPLSKGISQLSTRGQMERRRPPFLRGPNKTKEVEKSTGGKMDSAGSTISGAGDRLSEE
DLSPDALVRQNYELRHRLEEEAAHYKRRLDTYRQAQQHQAALVSRLQAKVLQYKQKCSEL
ESQMAESAVYDSNKAASSASPTTSVLDAAYQTLREIREEQVHDLDTALKKLAEERKRCEK
LLQLNTTLKDQLEESHQTNEALTNDLQKLSNDWDILREELAIKEEEWREEEQAFNEYYTS
EHNRLLNLWRDVVSVKRLFAEIKSSTERDLLKMKNSVISTFNDVSSACNNTGFAIRMQAA
MQPMISQQVQQAQEQVTTDLKTELTTLKQQYDVAQNKIHIKEEKINQLIRDVHNLEERCG
EAEAEVHRNSRLQDDIEILQSALRDIAHAVIQDAETREIESTQAPPHLHLSPTGPIPQKS
PKRGTRSNTIPAFAESTISAVQAALHKYQLTIHELQVKLQTNKEQLQSSRKQFENAEENV
KTLEKRAEELIIELDTIRSHCSQLNQEKDMLQKGLDTVRIEKNALDKSRVEINSMMENLN
SDCEKLQKANNKLQKLCDNLEDEKLYLQSELSRLSKDVELRELNLRSEEDRCSKMREELL
TLREELSKAYLAKDMLEQQKLETDGLISQIEKSKGDLELELERVLLEKSDLQEVLMKLET
VCSNHEQEKQRLQEELKKITEEKNKLASQCTDQQSDLGSLRKELLQAEQTRLDLESEKAT
SNEKVKFLEIEKEKIEIEVAHVTRERGDLSNQLSVLARKKETLNEELMRVRQRLEQANEM
NGRINRNLEDLVKDNEEKQVLLETNEKEVQRLQEQLASMRSEKETLEGVLFDTQTNLENM
HVKKTQLEKEQKELLIKQESLKGQVERLMKELESSEKRTHEIKQTLTQQSGDQEAEFQQI
ISNVKKHSEDNIKKLNEEKEQIKINLEKRLQQSLLQLTGEKDNEINQLQQRINEMQQHIE
NLCQQHEEVLLRAENDKQQALLIAHHDQQALMEKLETVLREMEEEKNNVERMKREAAARA
EQERNNTNQLRDELSRFKTKLDETKLKADEEKIKLELKIEELWKERESAQRESEELQVQL
HMTEDKVDSLQNQLHETIRKLKDAENLNETLRKELVDIRRQLADCTYEKEKYNSSNKELR
EHVKRIESEKREQSRTLEESYQKISALEDMKLNIDAERSRLQAQLRDMEKEILQLQKQLH
FTQDELQKSHQNNTQAQNDEKELQARLTNETEERERLQLQLHQVKKQLMDVDNSLKVTRQ
ELGRLRSRADEENERWRVREQELVVRLEDSRCRERKLEDQKHNLEVCLADASQQIQELKA
RLGGSEGRVRALDTQLSQLEMAKKDVEQKLSSVASTLRRIAGIQLDGSVNIPFKLMSPSR
RWSPARAQDHIDSTRDVILDVDPETVRKGVRSLMQQVAQIERERDDYKTELCNLKKQLVE
TQEIQNRSDMQINTLLTNIRILQDEKNSLEVKFSQKQSGYEMQLNSLQLKTEECEQLREK
VVNLEMMISNNSEEKTQSEEKVDKLKQTLSKVENEKRNLQEELNRSESRATKLELQRMSL
EGDLQRLQMMFQEKDANIHKLQERNDTQNRTITSLEERCTSLKSTVEQLNLTLEKTSNAE
SELKNEINSLHHNIMELTTTLQASNEKNKQLQKQLSNAENERRILSERIEFLQQSLNDLK
HTNQTLTDQITRLQNELANNEVQRCALESQLRIIAYPQEESTNKDEELLRQLQIAQRERS
EMRGKMEALNDKMKLLETDKRNLERQLSLFKSTSRSKSYERSEKAHVELLGTSFDIDHYE
QENRELRLKVRRLETQLAEKEAELIRMKSSYSHTHSIFDFSRDRTGEVERLRAAQLQAEK
LLEAREQSHRQQVLRLENQIQLLREQLNQEIKRRQLYVLRSSRAGREMQQLRQALGDSLR
TVAQDPSLDAMLLEHEARKLDSTLTSTTSLPPSLALPPPPSYDRSSTPVQLK
NT seq
5919 nt
NT seq
+upstream
nt +downstream
nt
atgtcacggccattgtctaaaggaatttcacaattatcaacgaggggacagatggagagg
cggcgaccaccgtttctcagaggccctaataaaacgaaagaggtagaaaaaagcacaggt
ggtaaaatggattccgcaggtagcacaataagtggtgctggagatcgtttaagtgaagaa
gatctttcaccagatgcattagttagacagaattatgaattacgacatcgtcttgaagaa
gaagcagctcattacaaaagacgtctggatacatacagacaagcacaacaacatcaggct
gctcttgtttcccgcttacaagccaaagtattgcaatacaaacaaaaatgttctgaatta
gaaagtcaaatggcagaatctgctgtatatgattctaataaggctgcgagttctgcatct
ccaacaacttctgttttagatgcagcttatcaaacactaagggaaatacgtgaggagcag
gttcatgatttagacactgctttaaaaaaactggcagaagaacgtaaaagatgtgaaaaa
ctgttgcaattaaatacaactttgaaagatcagttagaagaatctcatcaaacaaatgaa
gcactcacaaatgatttacagaaattaagtaatgattgggatattttaagagaagaattg
gctatcaaggaagaggaatggagagaagaagaacaagcttttaatgaatattatacttca
gaacataatagattattaaatctttggcgtgatgttgtttctgtaaaacgattatttgca
gagataaagtctagtacggaaagagacttattaaaaatgaagaatagcgttatttctacg
tttaacgatgtctcatcggcttgtaataatacaggattcgctataagaatgcaagcagct
atgcagccaatgatatctcagcaagttcaacaagcacaggaacaggtaacaactgatttg
aaaacagaattaacaacactcaaacaacaatatgacgtagctcagaataaaattcatata
aaagaggaaaagatcaatcaacttattcgtgatgttcataatttggaagaaagatgtgga
gaggccgaagcagaagtacatcgtaattcacgtttacaagatgatatagaaattttacaa
tctgcattgagggacatagcacatgctgtaatccaagatgcagaaactcgcgaaattgaa
tctactcaagcacctcctcatcttcatttgtcacctactggaccaatcccccaaaaatca
ccaaaaagaggtacaagaagcaacaccattccagcctttgctgaaagtactatcagtgct
gtacaagcagctctacataaatatcaattgaccatacacgagcttcaggtaaaattgcaa
accaataaagaacagttacaatcttctcgaaaacaattcgaaaacgcagaagagaatgtt
aaaactttagagaagagagcagaggaactaattattgaattggatacaattcggtcacac
tgctcacaacttaatcaagaaaaagacatgttacaaaaagggcttgatactgtaaggata
gaaaaaaatgcacttgacaaaagcagagtagaaattaacagcatgatggaaaatttaaat
agcgattgcgaaaaattacagaaagctaacaacaaattacaaaagctttgtgataacttg
gaagatgaaaaattgtatcttcaaagtgagctcagtagactatctaaagatgtagaatta
agagaactaaatctacgttcagaagaagacagatgcagtaaaatgagagaggaactgcta
actttacgggaagaattgagtaaagcatatctcgcaaaagatatgttagaacaacaaaaa
ttagaaacagatggattaatttcacaaattgaaaaaagcaaaggtgatttggaactagaa
ttggaacgtgtactattagaaaaatcagacttacaagaagttttaatgaaattagaaaca
gtctgcagcaatcatgaacaagagaaacaacgattacaagaagaattaaaaaagataaca
gaagaaaaaaacaaattagcaagtcaatgcactgatcagcaaagtgatttgggttcctta
agaaaagaattacttcaagcagaacaaaccaggctcgatttggagtcagagaaagcaact
tcgaatgaaaaagtaaaatttttggaaatcgagaaggagaagattgaaatagaagtagca
catgttacccgtgagcgtggagatttaagtaatcagttgtcagttttggcacgaaagaaa
gaaacattaaatgaagaattaatgagagtcagacaaagattagaacaagcaaacgaaatg
aatggaagaataaatcgaaatttagaagatctcgtaaaagataatgaagagaaacaggta
ctcttagaaaccaatgaaaaagaagtacaacgactacaggaacaacttgcatcaatgcgc
agtgaaaaggaaacgttagaaggcgtcttatttgatacacaaactaatttagaaaatatg
catgtgaagaagacacaattagaaaaggaacagaaagagttgttaataaaacaggaaagc
ttaaaaggacaagtagaacgattaatgaaggaactcgagagtagtgagaaacgaacacat
gaaataaagcaaactctaacgcaacaaagcggcgatcaagaagctgaatttcaacaaatt
atctccaacgtgaaaaaacatagtgaagataatataaaaaaactaaatgaagaaaaagaa
caaataaaaataaacttagagaaacgacttcaacaatccctgttgcaacttactggagag
aaagataatgagataaatcaattgcagcaaaggataaatgaaatgcaacagcacatagaa
aatttgtgtcaacaacatgaggaagttcttcttagagcagaaaatgataaacaacaagct
cttcttatagctcatcacgatcagcaagcattaatggagaaattggagactgttctacgt
gaaatggaagaagaaaagaacaatgtagaacgaatgaaacgggaagcagcagcgcgtgcc
gaacaggaacgtaataatacaaatcaactgcgcgatgaattgagccgttttaaaacaaaa
ttggacgagactaaactaaaagctgatgaagaaaagataaaacttgaattaaaaattgaa
gagctctggaaagaacgagaatcagcgcaaagagaatctgaagagttgcaagttcaatta
cacatgacggaagataaagttgatagtttgcaaaatcaattgcacgaaactattagaaag
ctcaaagatgccgaaaatcttaacgaaacattgcgtaaagagttagtggatattaggagg
caattagccgactgtacgtatgagaaagaaaaatataacagtagcaataaagaattacgc
gaacatgtgaaacgtatcgaaagtgaaaaaagagaacaaagtagaacgttagaagaatcg
taccaaaaaatttcagcattggaggatatgaaattgaatatagatgcagagagatctcgt
cttcaagctcaacttcgtgatatggagaaagaaatattacaattacagaaacagcttcat
tttactcaagatgagttacagaaatctcatcagaataatacgcaagcacaaaatgatgaa
aaagaattgcaagcacgattaactaatgaaacagaagaaagagaacgtttgcagctgcaa
ttacatcaagtcaagaaacagctaatggatgttgataatagcttgaaagtaacaagacaa
gagctcggaaggctgcgttcacgtgcagatgaagaaaatgaacggtggagagttagagaa
caagaactagtagttcgtctcgaggatagtcgatgtcgtgaaagaaaactcgaggaccaa
aagcataacttggaagtttgtctagctgatgcttcccaacaaattcaagaactcaaagca
cgtcttgggggctctgaaggacgagttcgagcactagatacccaattatctcaactggaa
atggcgaagaaagatgttgaacagaaattaagtagtgtggcttcgacattacgtcggatt
gcaggtattcaattggatggaagtgttaacatacccttcaaattaatgagtccatcaaga
aggtggagcccagcaagagctcaagatcacattgattctactagagatgtgatacttgat
gttgatcctgaaactgttagaaaaggtgtacgatctctcatgcaacaagtagctcaaatc
gaacgtgaaagggatgattataaaacggaattgtgtaacttgaaaaaacaattggtagaa
actcaagagattcagaatagatcagatatgcaaataaacactttattaacgaatataaga
atactccaggacgaaaagaattcattagaagtaaaattttctcaaaaacagagtggctat
gaaatgcagttaaattccttgcaactaaaaacagaagaatgcgagcaattgcgcgaaaag
gtagtcaatcttgaaatgatgattagtaataattctgaagaaaaaacacagtccgaggaa
aaagtagacaaactgaaacaaactttgagcaaagtagaaaatgaaaaacgtaatctacaa
gaggaacttaacagaagcgagtcccgtgctacaaaattagaattgcaaagaatgtcatta
gaaggtgatcttcaaagattgcaaatgatgtttcaggaaaaagatgcaaacattcataaa
ttacaagaacgaaatgatacgcaaaaccgaacaataacgagtttagaagaacgttgtact
tcgttgaaatctaccgtagaacaattaaaccttacattagaaaaaacatccaatgcagaa
agtgaattaaaaaatgaaattaattcattgcatcacaatattatggaattaacaactacc
ctacaggcttctaatgagaagaataaacagttacaaaaacaactttcaaatgctgagaat
gaacgcagaattttatctgaacgcatagaatttttgcaacaatctttgaacgatttgaag
catacaaatcaaacattaacggatcaaattactcgtctacaaaatgaattagcgaataat
gaagtacaacgttgtgccttagaatctcaactgagaataattgcttatccgcaggaagaa
agtacaaacaaagacgaagaattgctacgacagctacaaatagcgcaaagagagagaagt
gaaatgagaggaaaaatggaagctcttaatgataaaatgaaattattggaaactgataaa
cgtaatttggagcggcaattatcactatttaaatcgactagccgtagcaaaagctatgaa
cgttctgaaaaagcacacgtggaattacttggcacgagttttgatatagatcattacgag
caagaaaatagggaattaagattgaaagtccgtagattagaaacacaacttgcagagaag
gaagcggagcttataagaatgaaatcaagttacagtcacacgcactcaatatttgatttt
agtcgagatagaaccggagaagttgaaagacttcgagcagctcaattacaggctgagaaa
ttgttagaagcaagagaacaaagtcaccgtcaacaagttttacgtttagaaaatcagata
caactactgcgggaacaacttaatcaggaaataaaacgtcgacaattatacgtcttacga
agttcaagagctggccgagaaatgcaacaattaaggcaggccttaggcgattctttgaga
accgtagcgcaagatccatcattagacgcaatgttattagaacatgaagctcggaaattg
gattctactctgacaagtactaccagtttaccgccatcattagctttacctccaccacca
tcttacgatagatcttccacaccagtacagctgaaataa
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integrated database retrieval system