Bombus pascuorum (common carder bee): 132905408
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Entry
132905408 CDS
T09597
Name
(RefSeq) chromatin assembly factor 1 p55 subunit
KO
K10752
histone-binding protein RBBP4
Organism
bpas
Bombus pascuorum (common carder bee)
Pathway
bpas03082
ATP-dependent chromatin remodeling
bpas03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132905408
03083 Polycomb repressive complex
132905408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bpas03036
]
132905408
Chromosome and associated proteins [BR:
bpas03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
132905408
Histone modification proteins
HAT complexes
HATB complex
132905408
HDAC complexes
Sin3A-HDAC complex
132905408
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
132905408
PRC2.2
132905408
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
132905408
Heterochromatin formation proteins
Other heterochromatin formation proteins
132905408
Chromatin remodeling factors
NuRD complex
132905408
NuRF complex
132905408
NuRF complex (fruit fly)
132905408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
WD40_RFWD3
Beta-prop_WDR19_1st
ANAPC4_WD40
eIF2A
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_IFT140_1st
NBCH_WD40
MIOS_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
YqbF
Motif
Other DBs
NCBI-GeneID:
132905408
NCBI-ProteinID:
XP_060812692
LinkDB
All DBs
Position
3:complement(6786276..6789436)
Genome browser
AA seq
427 aa
AA seq
DB search
MGDKDGETFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGK
DYSVHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASHYDNEKGEFGGFGSVSGKIEIEI
KINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECQPDLRLRGHQKE
GYGLSWNPNLNGYLLSASDDHTICLWDINAPPKENRVIDAKTIFTGHTAVVEDVAWHLLH
ESLFGSVADDQKLMIWDTRCNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVA
LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSSEDA
EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPDTPAS
ELEAGAS
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgggcgataaagacggtgaaacctttgacgatgctgtggaagaaagagttatcaatgaa
gaatataaaatatggaagaaaaatactccgtttttatatgatcttgtgatgacacatgct
ttagaatggccatctttaactgctcaatggttaccagatgtaactagaccagaaggaaag
gattattctgtacatcgtcttattttgggtactcatacttcggacgaacaaaatcatttg
cttatagctagtgtacaattaccgaatgaggatgctcaatttgatgcatctcactatgat
aatgagaaaggagaatttggaggatttggttctgtcagtggaaagatagaaattgaaata
aaaataaatcatgaaggagaggtaaatagagcacgatatatgccacaaaacccatgtgta
attgcaaccaaaacaccatctagcgatgtccttgtttttgattacacaaaacacccaagt
aaaccagatcctaatggtgaatgccagcctgatctaagattaaggggacaccaaaaagaa
ggatatggtttatcatggaatccaaacttgaatggatatttgcttagtgcatctgatgat
catacaatttgtttatgggatattaatgcaccccctaaagaaaatcgtgtgatagatgca
aaaacaatctttactggacatactgctgttgttgaagatgtggcttggcatctgttacac
gaatctttatttggatctgtcgcggatgatcagaaattgatgatctgggacactagatgt
aacaataccagtaaaccaagtcatacagttgatgctcacactgccgaagtgaattgcttg
agttttaatccatattcggaatttattcttgcgactggcagtgccgataaaacagtagca
ctttgggacttgaggaatcttaaattaaaattacattctttcgaatctcacaaagacgag
atctttcaagttcagtggtcaccgcataacgagacgatattagctagtagcggtacagac
aggcgtcttcatgtgtgggatcttagtaaaattggtgaagaacaatccagcgaagatgct
gaagatggaccacccgagttactgtttattcatggtggtcataccgcaaaaattagtgac
ttttcgtggaatccaaatgagccttgggtcatatgttctgtatcggaagacaatataatg
caggtgtggcaaatggcggaaaatatttacaatgatgaagaaccagatacaccagcgagt
gaattagaagctggtgcttcataa
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