Bombus pascuorum (common carder bee): 132906257
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Entry
132906257 CDS
T09597
Name
(RefSeq) pseudouridylate synthase 1 homolog
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
bpas
Bombus pascuorum (common carder bee)
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bpas03016
]
132906257
Enzymes [BR:
bpas01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
132906257
Transfer RNA biogenesis [BR:
bpas03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
132906257
Prokaryotic type
132906257
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-GeneID:
132906257
NCBI-ProteinID:
XP_060814255
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All DBs
Position
1:15698985..15701117
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AA seq
472 aa
AA seq
DB search
MFYFIGYNSVKAHLKKTDLKLKKKIKKFYALILRINLIFLMFLNKQYIIRNSLIFSRFIR
LQYDKFLNKNMSVQVDNIKQDENIAERTNKRQMIDESYETITKAPKVESTEDVVQRKNNV
KRKNFVIMLGYLGKNYSGMQINRGTKTIEESLLSALLKARFITEEQFEDVREIKFQRAAR
TDKGVSAVRQVVSLQLPNHVNKEDINEYLPKDIRVFDVKRVTKTFNSKNKCDARTYRYVL
PTFALAPEDPNFLQVDNEEEIDEEQRLKQLSMIDEKPYHEFRLTPEMLDKLNEILKSFEG
THNFHNFTSKTKPSDPRAKRYIIYFRCIETFIANNMEFAVLEIKGQSFMLHQIRKMVSLI
IGICRNIVTSDIVKDVFSLEKVDIPVAPGLGLSLHFVHYEYYNERYGKDGFHKTLEWQEC
KEDVDKFYKECILQDIINEEISEKVMMNWLASILTPKRFAFKECVVQCEYLS
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgttttactttataggttataactctgtaaaggcgcatctcaaaaaaactgatctcaaa
ctcaaaaaaaaaattaaaaaattttatgcattaattttaaggattaatttaatattttta
atgtttcttaacaagcagtatattattagaaatagtttaatattttcccgttttataaga
ttacaatacgataaatttttaaataaaaacatgtcagtccaagttgacaatattaaacaa
gatgagaatattgctgaacgaactaataaaagacaaatgatcgatgaaagttatgaaacg
ataacaaaagcgccaaaggtagaatcaactgaagatgtagtacaaagaaaaaacaatgtt
aaaaggaaaaactttgtgataatgttaggttaccttggcaaaaattattctggtatgcaa
attaatcgtggtacaaaaactattgaagaaagtttattatctgctttgttgaaagcacgt
tttattacggaagaacaatttgaagatgtaagagaaattaaatttcaaagagctgcacgt
acagataaaggtgtatcagcagttaggcaagttgtttctttacaattgcctaatcatgta
aacaaagaagatataaatgagtaccttccaaaggatatcagagtatttgatgtaaagagg
gtaacaaaaacttttaatagtaaaaataaatgcgatgctagaacatacagatatgttctt
cctacatttgctttggctccagaagatccaaattttttacaagttgataatgaggaagaa
atagatgaagaacaacgacttaaacaattatctatgatagatgaaaagccatatcatgaa
ttccgattgactccagaaatgcttgacaagctaaatgaaattttgaaatcattcgaaggc
acacataattttcataattttacatcaaaaacaaagccatcagatccaagagccaagcgt
tatataatatacttccgttgtattgaaacatttattgcaaataatatggaatttgcagta
ctggaaataaaaggacaaagttttatgttacatcaaattagaaaaatggtatctttaatt
ataggaatttgcagaaatattgtgacaagtgatattgtcaaagatgtattttcattagaa
aaagtcgacatccctgttgcaccaggtttaggactaagtttacattttgtacattatgaa
tattataatgaaagatatggaaaagatggatttcacaaaacattagaatggcaagaatgt
aaggaagatgttgacaaattttataaagaatgcattttacaggatataataaatgaggaa
atatcagaaaaagtaatgatgaattggttggcgtctatcctaacaccaaagagatttgca
tttaaagaatgtgtagtacagtgtgaatatttatcataa
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