Bombus pascuorum (common carder bee): 132906401
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Entry
132906401 CDS
T09597
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
bpas
Bombus pascuorum (common carder bee)
Pathway
bpas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132906401
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpas03019
]
132906401
Messenger RNA biogenesis [BR:
bpas03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
132906401
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
132906401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Baculo_PEP_C
PulA_N1
Motif
Other DBs
NCBI-GeneID:
132906401
NCBI-ProteinID:
XP_060814545
EnsemblRapid:
ENSBPAG00000003868
LinkDB
All DBs
Position
4:complement(1221635..1226591)
Genome browser
AA seq
684 aa
AA seq
DB search
MAATRKLQGEIDRCLKKVTEGVETFEDIWQKVHNATNSNQKEKYEADLKKEIKKLQRLRD
QIKTWLASGEIKDKSTLLEYRKLIETQMERFKVVERETKTKAYSKEGLGAAQKLDPAQKE
REEVSNWLTNSIDTLNLQLDTFESEMESLVAGKKKRLDKDKQDRMDELKGKLDKHRYHIR
KLETLLRMLDNMSVEVNSIKRIKDDVEYYIESSQDPDFEENEYIYDDIIGLDEVELSGVG
IPSSATTDSNNSNETGGTPTSTNSGTSPIPSPPLSSTMHNHSSDSSTDNDKKTKPVKPTA
VRPLLNSQASIPTTGSTATIKSNLLSSSTPSKTIPMTPSHSSPSSTSNHIATTNAGNFAT
VAASHTNSQAIHSTSSKTSSHSSENGLLSSSSASSVTSNVPQTTSQQHSNPVPIQTTHVL
HNPQNQNHSSETEMTTPIPPSSSPQSSVSSRSSPLPANSCSPAPSTANGLIPKLPDGMSS
LKSIAQQVIVRAGLDIPPSESNRNIFDTVKANNNNSKVTVDAHIPPLLGVAPLGPVPLQK
EHQLQFQLMEAAHYHMPDPSDSERLRSYLPRNSCVTPSYYQQSQLPHSDTVEFFQRLSTE
TLFFIFYYMEGSKGQYLAAKALKKQSWRFHTKYMMWFQRHEEPKVINEEYEQGTYIYFDY
EKWGQRKKEGFTFEYKYLEDRDLN
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacgagaaagttgcaaggtgaaatagatcggtgccttaaaaaagtaacggag
ggtgtagagacatttgaagatatttggcagaaggttcataatgctacaaacagtaatcag
aaggagaaatatgaagcagatctcaagaaagaaatcaaaaaacttcaaaggttacgtgat
cagattaaaacctggcttgcatcaggtgaaattaaggataaaagtacgcttcttgaatat
agaaagttaatcgaaactcaaatggaaaggtttaaagttgtggagagagaaacaaaaaca
aaagcttattcgaaagaaggattaggagctgctcaaaagcttgatccagctcaaaaagaa
cgagaagaagttagcaattggcttacaaattctatagacactttaaatcttcagctggat
acatttgaatccgagatggaatcattagtcgcgggaaagaaaaaaaggttagataaagat
aagcaggataggatggatgaattaaaaggaaagcttgataaacatcgttaccatatccgt
aaattggaaacattgttacgcatgttggacaatatgtctgttgaagttaactctattaag
aggataaaagatgatgtagagtattatatcgaatcctcgcaggatcctgattttgaggaa
aatgaatatatctatgatgatattattggtctcgatgaagttgagctgtctggagttggt
attccctcatcagcaactacagatagtaataatagcaacgaaactggaggtacaccaacc
tcaactaactctggtacttcacccataccatcacctccattgagttctaccatgcataac
cattcaagtgatagttctacagataatgacaaaaaaacgaagcctgtgaaaccaacagca
gtcaggccattattaaattcacaggcgagcattccaaccacgggaagcactgccaccata
aaatcgaatttattatcaagcagcactccaagcaagaccattcccatgacacctagccat
agctcgcctagttctacaagtaaccacattgccacgactaatgctggtaatttcgctaca
gtagctgcatcacatactaattcacaagccatccattctacctctagtaaaacatcttct
catagcagtgaaaatggtttattgtcatcatcgtctgcgtctagtgttacctcgaatgtg
ccacaaacaacctcgcagcagcacagtaatccagtgcccatacagacgacacacgtgttg
cataatccacaaaatcagaatcacagcagcgaaactgaaatgacaacgccgatcccacca
tcttcttcaccacagtcatcagtcagcagtagatcttcacctttgcccgcaaattcctgc
tcgccagcgccatccactgccaatggtctcatccctaagcttcctgatggcatgtcctct
ttgaaatctatagcccaacaagtaattgtccgagcaggtttggacataccgccgtccgag
tcgaacagaaacatctttgacaccgttaaggcgaacaataataacagcaaagtcaccgtg
gatgcacacattcctcctcttcttggtgttgcgcctctcgggccagtacctcttcagaaa
gaacaccagttacagttccaattgatggaggccgcccactaccatatgcctgatccatct
gattctgaacgtttacgatcatatttaccaagaaattcatgtgttacaccttcttattat
caacagagtcaacttccccattctgatactgtggagttcttccaacgtctttccacggaa
acgttgttcttcatattttactacatggaaggttctaaaggccagtacctggctgcaaaa
gctctaaagaaacaaagttggaggtttcatacgaagtatatgatgtggtttcagaggcac
gaagaacccaaagtgatcaacgaggaatatgagcagggaacctacatttatttcgattat
gaaaagtggggacaaagaaaaaaggaaggttttacatttgagtacaagtacttagaggac
agagatctgaattaa
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