Bombus pascuorum (common carder bee): 132906442
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Entry
132906442 CDS
T09597
Name
(RefSeq) histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
bpas
Bombus pascuorum (common carder bee)
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bpas01009
]
132906442
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpas03019
]
132906442
04131 Membrane trafficking [BR:
bpas04131
]
132906442
03036 Chromosome and associated proteins [BR:
bpas03036
]
132906442
Enzymes [BR:
bpas01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
132906442
Protein phosphatases and associated proteins [BR:
bpas01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
132906442
Messenger RNA biogenesis [BR:
bpas03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
132906442
Membrane trafficking [BR:
bpas04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
132906442
Chromosome and associated proteins [BR:
bpas03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
132906442
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
132906442
NCBI-ProteinID:
XP_060814629
LinkDB
All DBs
Position
4:16371246..16377539
Genome browser
AA seq
1160 aa
AA seq
DB search
MSDSVICKNLYSAVKQLADSEIELIKAIENSGKINNRNIKNTMSVTDKKSAKKCAKIFNV
RPSAALIAAKHEATQRVLQGKKSNNVFVHDIYQKAIDAYNIKRKETGIVFDRSMAEHKCL
WDPSYPECPARLTRVVQRCEELGLINRCKLVTPRQASEDEILMKHSQEQIDILKATNECT
DVDSLELLSSKYDAIYIHPSTYQLSLLAVGSTINLVESICKEEIQNGMAIIRPPGHHAMK
SEYCGYCFFNNVAIAAEKVLSSNLASKILIVDWDIHHGQATQQMFYNDPRVIYFSIHRYE
NGEFWPNLRESNFHFVGDGLGEGYNFNVPLNKTGMTNADYLAIFQQVLLPMAYEFQPDLI
IVSAGYDAALGCPEGEMLLTPACYAHLLSSLLSLASGKVAVILEGGYCLKSLAESAALTL
RTLLGDPCPMLETLTLPSVSVRDTILNTIYAHKPYWKCYQYQDTYSINSTTNNKEGSSNQ
YLPAVTFKGTDIKPEVYETRNCYPTQNKEVIEMIEKQLNTLIQFTNLSKAPNKVCIVYDD
RMLKHCDMSNDNHPEKPHRINIIYKKYQEYNLLDRCYVQQGRSATREELILVHSKEYIDT
IKDTENLKPKELKKQAETYNSVYLHPETWSSACISTGSLLQVVDSVLNGESQSGIAIVRP
PGHHAGENTACGFCIFNNIAIAARYAVEFHHVKRVLIVDWDVHHGNGTQSIFEEDPKVLY
MSVHRYDNGNFFPNSKRANYSYVGSLSGEGFTVNIPWNKKGMGDAEYIAAFQQIIMPIAY
QFNPELVLVSAGFDACIGDPLGGCFVTPEMYGHLTHWLSSLANGRIILSLEGGYNINSIA
HAMAICTKSLLGDPLPILENGQTPCASAIHTINNVIKTQKQYWMNLVFNLSLPKERVLPK
PKVPHIKTNEHVINSEEILKHSESKIALEEIETEKMQTSQKNLTTWKLINKMASQEDCEK
LQEFLKSVHERRTHTTINASYNDKGSKYTKKCMNQDEEEGHSDENVTNFAAGSSGEQGER
ASVQMTGSKSLHDYLLENSQALVDGDMFAVIPLRECPHLDSVKDVPVSGIDIYSPCIECE
SNVENWICLQCYTVHCARNINQHGLIHAEEMEHPLALSFSDLSVWCYKCEAYIDNPRLFA
ARNAAHQSKFNEELPWTYEI
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattctgtgatctgcaaaaatttatactctgctgttaaacaattagcagacagt
gaaattgaattaataaaagctatagaaaattcaggaaagataaataatagaaatattaaa
aatactatgtctgtgacagataagaaaagtgccaaaaagtgtgcaaaaatatttaatgtt
cgtccatctgctgctttaatagcagctaaacatgaagcaacacaacgtgtattacaagga
aagaaatctaacaatgtttttgtacatgatatatatcaaaaagctattgatgcatataat
ataaaaaggaaggaaactggcattgtatttgatcgttctatggcagaacataaatgcctt
tgggatccaagttatccggaatgtcctgctagattgacaagagttgtgcagagatgcgag
gagttaggtttaataaatagatgtaaattggttacaccaagacaagcctcagaggatgaa
atactaatgaagcacagtcaagaacagatagatattttgaaggctactaatgaatgtaca
gatgtagatagtttagaattattatcatcaaaatatgatgccatttatatacatccttct
acctatcaattgtctttgttagctgtgggttcaacaataaatttagtggaaagcatttgc
aaagaagaaattcagaatggtatggccattataaggccaccaggacatcatgcaatgaaa
tcagaatattgtggatattgtttctttaataatgttgcaattgctgctgaaaaagtttta
agtagcaatttagctagtaaaattttgattgttgattgggatatacaccatggacaagct
actcagcaaatgttttataatgatccacgagtaatttatttttcaattcaccgttatgaa
aatggtgaattttggccaaatcttagagaatccaatttccattttgttggagatggttta
ggagaaggatataattttaatgtgccacttaataaaactggcatgaccaatgctgattat
ttagccatatttcaacaagttttattgccaatggcttatgagtttcaacctgatcttata
atagtatcagctggatatgatgcagccttgggctgtccagagggtgaaatgttgctaaca
cctgcatgttatgctcatttactatcatcattattgagtttagcttctggaaaagttgct
gttatattggagggtggttattgtttaaaatcattagcagaaagtgcagcattaacacta
cgtactttgttaggcgatccatgccctatgttagaaactctcacattaccttcagtaagt
gtacgtgataccattttaaatacaatttatgcacataaaccatattggaaatgctatcaa
taccaagatacatacagtattaatagtacaacaaataataaagaaggaagtagtaatcaa
tatttacctgcagttacattcaaaggaactgatattaagcctgaagtgtatgagactcga
aattgttacccaactcaaaataaagaagttatcgaaatgatagaaaagcagttaaataca
ttaatacagtttactaacttatctaaagcacctaacaaagtatgcattgtttatgatgat
agaatgttaaaacattgtgatatgtctaatgataatcatccagaaaaaccacatcgtatt
aatattatttataaaaaatatcaagagtacaatttacttgatcgatgttatgtgcaacag
ggacgaagtgcaacaagagaagaattaatattagttcattcaaaagaatatatagataca
ataaaagatacagaaaacttaaaaccaaaagagctaaaaaagcaggcagaaacttataat
tcggtttatttgcatcctgaaacctggtcaagtgcctgtatatcaactggatcattatta
caagtagttgatagcgtattaaatggagaaagtcaatccggtattgctattgttaggcct
ccagggcatcatgctggagagaatacagcatgtggtttttgtatctttaacaatattgct
atagcagctagatatgcggtagaatttcatcatgtaaaaagagtattgatagtagattgg
gatgtacatcatggtaatggaactcaatccatctttgaggaagatcctaaagttttgtat
atgtctgtccatcgttatgataatggcaatttttttccaaattctaaacgagcaaattac
tcttatgtcggttctctatcaggagaaggtttcactgttaacattccatggaataagaaa
ggaatgggtgatgcagaatatatagcagcatttcaacagataataatgccaattgcttat
cagtttaatccagaattagtcttagtttctgcgggtttcgatgcatgtattggggatcct
ctaggaggttgtttcgtaacaccagaaatgtatggacacttaacacactggctatcttct
ttagctaatggtcgtattattcttagccttgaaggaggttacaatattaattcaatcgcg
catgcaatggctatttgtacaaaatctttgcttggtgatcctttaccgatattagagaat
ggccaaactccatgtgcgagcgctattcacactataaataatgttataaaaacacaaaaa
caatattggatgaatttagtatttaatttatctttaccgaaagagagagtacttcctaaa
cccaaagttccacatataaagacaaatgaacatgttataaacagtgaagaaatattaaag
cattcagaatctaagatagcattggaagaaatagaaacagaaaaaatgcaaactagtcag
aaaaaccttacaacttggaagctgataaataaaatggcctcacaagaagattgtgagaag
ttacaagagtttcttaaatctgtacatgagcgacgtacacatacaacaattaatgcttct
tataatgataaaggttccaagtatacaaagaaatgcatgaatcaggacgaagaagaagga
cattctgatgaaaatgttaccaattttgctgctggtagtagtggtgaacaaggcgaaaga
gcaagtgtgcaaatgactggaagtaaaagtttacatgattatttgttggaaaattcgcaa
gcattagtggatggagacatgtttgcagtgatacctttacgagaatgtccacatttggat
agtgtcaaggatgtaccagtttctggaattgatatatattcaccatgtatagaatgtgaa
agcaatgttgaaaactggatctgtttacagtgttatacggttcactgtgctcgtaatatt
aatcaacatggtttaatacacgctgaagaaatggaacatccattggccctaagtttcagt
gatttatcagtttggtgttacaaatgtgaggcatacatagataatccgcgattatttgcc
gcgcgcaatgctgcacatcaaagtaaatttaatgaggaattaccatggacatatgaaata
taa
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