Bombus pascuorum (common carder bee): 132906690
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Entry
132906690 CDS
T09597
Name
(RefSeq) putative transcription factor SOX-15
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
bpas
Bombus pascuorum (common carder bee)
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bpas03000
]
132906690
Transcription factors [BR:
bpas03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
132906690
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
DUF6772
Motif
Other DBs
NCBI-GeneID:
132906690
NCBI-ProteinID:
XP_060815070
LinkDB
All DBs
Position
1:16874057..16942205
Genome browser
AA seq
704 aa
AA seq
DB search
MDAHGWNLAEMCQRYHHAVPAAQNSSPARDPSAAIVQGLSTATHIEQASPSYSHYTMLDN
YDRGEVTPPPVSSYGGSPGLLALHSSLYATPTSRAYDIESNIDGNDSSMPIDTQIISIPG
MLSGPVQQRLEDMSWLASGPSLEYQQGISPIPAGVKMCHPGSTAQRSLKEQRIRRPMNAF
MVWAKVERKKLADENPDLHNADLSKMLGKKWRGLTPQDRRPYVEEAERLRVIHMQEHPNY
KYRPRRRKHAKRAPGAPSSPPSATNTTVNRSNPSGTTIHHSMSKMDSYQGIPQIPWGGHS
PISSLYHQQQQQGIQEYKSESNSLYGSPYTPIIHTPDISPVASPEPDGDGTHLPSNQNPD
PERDLMEGSSKQHGEMSEQTKRYTFMSTDNQLHTGHAGGTSISSCQNSGAYTDTLTYKKS
VSYLNFERQPSSIAAVGIANGMMVSCNKLRSGFENVGSVTGTFYPPVASPHDQSLQHYTN
TQSSKTANYSMQSTVESNYNPVQCANRQQSMGIRGAAEGCSGVSHRYQMSHHQEYQTEGT
SAGQQHPILGHMEAAMATTAEEEQQQTLQLEKYFKYSHPTNVAHTSLTSQNLLDSNHNYA
SDLRYYTPQQTQLDMSNSQCIVDDQAKDARCSNVAIGHAMEQYHQAMDVAKYPEHQQQQQ
QQQQQQQPQQTQQGQQSQSIEHVSKADDDFSVILADVRKTCYSS
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggatgcccatgggtggaatttggccgaaatgtgccagcgctaccatcacgctgtacca
gcagcccaaaattcttcgccagctagggatccctcagctgccatcgtgcaaggcttgtca
acggctacgcacatcgagcaggccagcccttcttattcccattacacgatgctggataat
tatgacaggggtgaggtgacaccaccaccggtcagcagttatggcggatcccctggactc
ttggcacttcattcctcgctttatgcgactcctacgtcgagggcctacgacatcgagtcg
aacatcgacggcaacgacagttccatgcccattgacacccaaatcatttcgataccagga
atgttgagcggtccagtgcaacagcgactcgaggacatgtcctggctggcttccggtccg
tcgctggagtatcaacaaggcatctcgccgattcccgcgggagtgaagatgtgccatcca
ggcagcacggcccagaggagcctgaaggagcaacggatacgtcgcccgatgaacgcgttc
atggtctgggcaaaggtcgagcgcaagaaattggccgacgagaatcctgatctccacaac
gccgatctcagcaagatgctcgggaagaaatggcgagggttgaccccgcaggacagaagg
ccgtacgtggaggaagccgagagactgagggtcatacacatgcaggaacatccgaactac
aagtacaggccacggcgtaggaaacacgcgaaacgggccccaggggcgccgtcctctcct
ccgtccgcgaccaacaccacggtcaataggtccaacccctctggtaccacgattcatcat
tccatgtccaagatggacagttatcaaggcattcctcagatcccgtggggcggacattcc
ccgatctcatccctgtatcaccagcagcagcagcaaggtattcaggagtacaaatcggag
agcaattccttgtacggtagtccttatacgcctatcattcacacaccggacatatctcca
gttgccagtcccgagccagatggtgacggaacgcatttgccatccaatcaaaatccagat
cctgaacgtgatctgatggagggttcgtcgaagcagcacggcgaaatgagcgagcaaacg
aaacggtacactttcatgagtaccgataatcagctgcacacgggtcatgctggtggtact
agcatatcgtcgtgtcagaattctggtgcttacacagatactctgacttacaaaaaatcg
gtgagttacttaaatttcgagagacagccgtcgagcatagccgcggttggtatagcgaac
gggatgatggtatcgtgcaataaattgcgctctggatttgaaaatgttggctctgtgacg
gggactttttatccgccagtcgcatccccgcatgatcaatcgttgcagcactacacgaac
acccaatcctcgaagactgccaactattcgatgcagtccactgttgagagcaactataat
cctgttcagtgtgccaatcgacaacagtccatggggattcgcggagccgctgaaggttgt
tccggtgtatcccaccggtaccaaatgagtcatcaccaggagtaccaaacggagggaacc
agcgctggccaacagcatccgattctgggtcatatggaggcagcgatggccaccaccgcc
gaagaagaacagcaacagacgttacagttggagaagtatttcaaatactcgcatccgacc
aacgtggcgcataccagcctcacctctcagaatctccttgacagcaatcataattacgcc
agtgatcttcgttactacacgccccagcagacgcagctggacatgtcgaactctcagtgc
atcgtcgacgatcaagccaaggatgctcgatgctcgaacgtggccataggccatgcgatg
gagcagtaccatcaggccatggatgtggccaagtatccggaacaccaacagcaacagcag
cagcaacagcaacagcaacaaccgcaacagactcaacagggtcagcaatcgcagagtatc
gagcatgtttcgaaggcggacgacgatttcagtgtaatacttgccgacgtgcgcaagact
tgttacagtagctag
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integrated database retrieval system
