KEGG   Bombus pascuorum (common carder bee): 132906737
Entry
132906737         CDS       T09597                                 
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
bpas  Bombus pascuorum (common carder bee)
Pathway
bpas03030  DNA replication
bpas03410  Base excision repair
bpas03420  Nucleotide excision repair
bpas03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bpas00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    132906737
   03410 Base excision repair
    132906737
   03420 Nucleotide excision repair
    132906737
   03430 Mismatch repair
    132906737
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bpas03032]
    132906737
   03036 Chromosome and associated proteins [BR:bpas03036]
    132906737
   03400 DNA repair and recombination proteins [BR:bpas03400]
    132906737
DNA replication proteins [BR:bpas03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    132906737
  DNA Replication Termination Factors
   ELG1-RFC complex
    132906737
Chromosome and associated proteins [BR:bpas03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    132906737
DNA repair and recombination proteins [BR:bpas03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     132906737
  Check point factors
   HRAD17(Rad24)-RFC complex
    132906737
SSDB
Motif
Pfam: Rep_fac_C AAA RCF1-5-like_lid DNA_pol3_delta2 AAA_lid_RFC1 AAA_16 AAA_22 Mg_chelatase AAA_11 Rad17 AAA_30 AAA_24 bpMoxR AAA_assoc_2 DUF815 ResIII MCM AAA_5 SLFN-g3_helicase AAA_19 ATPase_2 RuvB_N DNAX_ATPase_lid AAA_7 AAA_28
Other DBs
NCBI-GeneID: 132906737
NCBI-ProteinID: XP_060815182
LinkDB
Position
5:complement(11516514..11518501)
AA seq 357 aa
MQAFLKTGKLGPGEPKKASTSRSKEEHSGSATPWVEKYRPRTVEDVVEQAEVVEVLRQCL
TGGDFPNLLFYGPPGTGKTSTILAAARQLFGSLYKERLLELNASDERGIQVVRDKIKSFA
QLTAGGMRDDGKSCPPFKIIILDEADSMTNAAQAALRRTMEKESHSTRFCLICNYVSRII
EPLTSRCTKFRFKPLGEDKIVERLEYICKEEDLKATKPVLLKIVEASGGDLRRAITCLQS
ITRLKGKGIDITVDDIIEIIGIVPDKWLDDLMNVCKTKDYSKAEEFIDQFMLEAYATSQV
IEQLSERIIYSNELTDKQKTLIADRLGECNYRLLDGGSEYIQLINLCCGIIKAYELV
NT seq 1074 nt   +upstreamnt  +downstreamnt
atgcaggcatttctaaaaactggcaaattaggacctggtgagcctaaaaaggcttcaact
tcacgttcgaaggaagaacatagtggttctgcaacgccatgggttgagaaataccgacca
agaactgtagaagacgttgttgaacaggcagaagtagtagaggtattgagacaatgttta
acaggtggagattttccaaatctattattttatggcccacctggtactggtaaaacaagt
actatactagctgcggctagacaattatttggcagtctctacaaagaaagactactggaa
ttaaatgcttctgatgaaagaggtatccaagttgtaagagataaaatcaaatcttttgca
caacttacagcaggtggtatgagagatgatgggaaaagttgtccacctttcaaaattatt
atcttagacgaggcagatagtatgactaatgctgcacaagctgcacttcgtcgtactatg
gaaaaagaatctcatagtacccggttttgtttaatttgtaactatgtatcgagaatcata
gaacctttgacttctcgttgtacaaaattcagatttaaaccgttgggagaagataaaatt
gttgaaagattagaatatatatgtaaagaggaggacttgaaggcaacgaagcctgtccta
ctaaaaattgtcgaagcctcgggtggagatttacgacgcgccataacgtgtttgcagtcc
attacaaggttgaaaggcaaaggcatcgatattactgttgatgatattattgaaattatt
gggattgtacctgataaatggttggatgatttaatgaatgtatgcaagacaaaagattat
agcaaggcagaggaatttattgatcaatttatgttagaagcatatgctacatcacaagtt
attgagcagctcagtgaaagaattatatattccaatgaattaacagataagcagaaaact
ctcattgcagatagactaggggaatgtaattataggttgctagatggtggaagtgaatat
atacaacttataaatctttgttgcggtattataaaagcttatgaattagtataa

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