Bombus pascuorum (common carder bee): 132907009
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Entry
132907009 CDS
T09597
Name
(RefSeq) ATP-dependent RNA helicase me31b
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
bpas
Bombus pascuorum (common carder bee)
Pathway
bpas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132907009
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpas03019
]
132907009
03036 Chromosome and associated proteins [BR:
bpas03036
]
132907009
Enzymes [BR:
bpas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
132907009
Messenger RNA biogenesis [BR:
bpas03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
132907009
mRNA degradation factors
5'-3' decay
Decapping complex
132907009
Chromosome and associated proteins [BR:
bpas03036
]
Eukaryotic type
Gene silencing
piRNA pathway
132907009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
132907009
NCBI-ProteinID:
XP_060815703
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All DBs
Position
1:17638846..17647236
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AA seq
444 aa
AA seq
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MMTETHINSNHVLNSGLNTKSEIDKMDDVGWKAKLKIPPKDKRIKTSDVTDTRGNEFEEF
CLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDILARAKNGTGKTGAYSIPVLEQVDPR
KDVIQALVLVPTRELALQTSQICIELAKHMDIKVMVTTGGTDLRDDIMRIYQTVQVIIAT
PGRILDLMDKNVANMDHCKTLVLDEADKLLSQDFKGMLDHVISRLPHERQILLYSATFPL
TVKQFMEKHLRDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQITQSIIFCN
STQRVELLAKKITDLGYCCYYIHAKMAQAHRNRVFHDFRAGLCRNLVSSDLFTRGIDVQA
VNVVINFDFPKMAETYLHRIGRSGRFGHLGIAINLITYEDRFNLHRIEQELGTEIKPIPK
VIDPSLYVARPEDNNSMEEGNVSK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgatgacagaaacacatataaattccaatcatgtcctaaattctggtttgaataccaaa
tcagaaatagacaaaatggacgatgtgggttggaaagccaaattaaaaattccaccaaag
gacaaacgaattaaaactagtgatgttactgatactcgtggcaatgaatttgaggagttt
tgcctaaaacgagaattattaatgggcatctttgaaaaaggttgggaaaagccttcccca
attcaagaagccagtattcctattgcattatctggtaaagatatcttggcccgtgcaaaa
aatgggactggtaaaactggggcctattcaattccagtgctagaacaggttgatccacga
aaagatgtgattcaggcactagtacttgtacccactagagagttagctcttcagacatcg
caaatttgcattgaactggcaaaacatatggacataaaagtaatggtaactactggagga
acagacttacgggatgacattatgaggatttatcagacagtacaagtaataatagcaacg
ccaggaagaattcttgaccttatggacaagaatgtcgcaaatatggatcattgtaaaact
ctagttttggatgaagcagataaactactgtcgcaagattttaaaggaatgttggatcat
gtcatttccagattaccacatgaacgtcaaatactgctgtattcagctacatttcccctg
acagtgaaacaattcatggaaaaacacttaagagatccatatgagattaatttaatggaa
gaactcacattgaaaggtgtaacacaatattacgcctttgtacaagaacgacaaaaagtt
cattgtcttaacacactgttctccaagttgcaaataacacaaagcataatattctgcaat
tcaacacaacgtgttgaattacttgcaaaaaagataacagatcttggatattgctgttat
tatatacacgcgaaaatggcgcaggcacaccgaaatcgcgtgtttcatgattttcgagca
ggactatgcagaaacttggttagcagtgatctgtttactcgtggtattgacgtacaagct
gtgaacgtcgttatcaattttgactttccaaaaatggcagagacataccttcatcgtatc
ggccgatcaggacgattcggtcacttaggtatagcaattaacctaatcacgtacgaagac
cgttttaatttacatcgtatcgaacaagagcttggaacagagattaaacctattccaaag
gtaatagatccaagtttgtatgtagcaagaccagaagacaataatagcatggaagagggt
aatgtgtctaagtag
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