Bombus pascuorum (common carder bee): 132907055
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Entry
132907055 CDS
T09597
Name
(RefSeq) regulator of gene activity isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
bpas
Bombus pascuorum (common carder bee)
Pathway
bpas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132907055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpas03019
]
132907055
Messenger RNA biogenesis [BR:
bpas03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
132907055
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
132907055
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
132907055
NCBI-ProteinID:
XP_060815782
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All DBs
Position
5:6533953..6537506
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AA seq
459 aa
AA seq
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MANLNFEQPPRSIANASLISRTGGGGGLNSSTLTGHVTPTSSMFSGSSASTSSSVNSAVV
VTNVYPGASGAGGGQNSHQSQQQQLSPMGTRGLFGQRAFTDRRTMPALGTSNPMASMGTF
GIPQSRNYGSQINNFHSVFGSGGGGDTSTPPLLDLSEFPSLTNRGQGDSMPQPSPMPGKQ
PYVGMVKQPTSESSEFTMSSEDFPALPGTQNREGPSPGGSVSGDKNIPVGLGPEIGQDIL
QANRAPGSEKSQLTKRGVQIFPDGKVLNLPTSMIQDQFGVVGLLTFIRAADTDPNLVSLA
LGYDLTTLGLDLTSGDSIHQNFAGPWTEIPCRPQDIDFHVPPEYLINAAIRDKLAPVKLN
RYKDDLLFYMFYTNIGDMMQLAAAAELYTREWRYHMEEKVWITQAPGLGLVEKTSTYERG
TYYYFDAQSWRKVAKEFHLEYTKLESRPILPPNFYLNQP
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggctaacctgaactttgaacaaccaccacgcagtattgcgaacgcaagccttatatcg
cgcacaggtggtggggggggcttaaattcatcgactcttacgggtcatgtcacacctacc
tcgagcatgttctcaggctcatctgcaagcacttccagttcagttaactctgcggtagta
gttactaacgtttatcctggagcatcaggagcaggaggtggacaaaatagtcatcagtct
caacagcagcagctctctcctatgggcaccagaggactgtttgggcagagagcttttaca
gatagacgtacaatgcctgctcttggaacatcaaatccaatggctagcatgggcacattt
ggaatacctcaaagtcgaaattacggatctcaaatcaataattttcactctgtttttggc
agtggaggaggtggagatacaagtactcctccattgttggatctatctgagtttccttca
ttaacaaatagaggacagggtgattctatgccgcaacctagtcctatgccaggcaaacaa
ccttatgttgggatggtaaaacaaccaacatctgaatcaagtgagtttacaatgagttct
gaggattttccagcattgcctggaacacaaaatagagaagggccatcgccaggtggaagt
gtttctggagataaaaacatacctgttggacttggtcctgaaattggacaagatatattg
caggcaaatagagcaccaggatctgagaagtctcaattaactaaaagaggtgtacaaata
tttcctgatggcaaggtgcttaatttaccaactagtatgatacaagaccagtttggagta
gttgggttattgacatttattagggcagctgatacagatccgaatctagtatctttggca
ttaggctacgatttaactacattaggattagatcttacttcaggagatagtattcatcaa
aattttgccggaccttggacagaaataccatgccgaccgcaggatatcgattttcacgta
ccgccagaataccttattaatgcagccatcagggataagctagcaccagttaagctaaat
cgatataaagatgatctactattttatatgttttatacgaatattggtgatatgatgcaa
ttagcagcagcagcggagttgtacactagagagtggcgatatcatatggaagaaaaggtt
tggataacgcaagcaccaggattgggacttgtagaaaaaacatcaacatacgaacgcggt
acttattattattttgatgcgcaaagttggagaaaagtagcaaaagaatttcatttggaa
tatacaaaactagaaagtagacctattcttcccccaaacttttacctaaaccagccttga
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