Bombus pascuorum (common carder bee): 132907446
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Entry
132907446 CDS
T09597
Name
(RefSeq) transcription elongation factor SPT6-like
KO
K11292
transcription elongation factor SPT6
Organism
bpas
Bombus pascuorum (common carder bee)
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpas03021
]
132907446
03036 Chromosome and associated proteins [BR:
bpas03036
]
132907446
Transcription machinery [BR:
bpas03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
132907446
Chromosome and associated proteins [BR:
bpas03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
132907446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
S1
SH2
HHH_3
HHH_9
Tex_central_region
Spt6_S1
S1_RRP5
OB_RRP5_4th
Tex_N
Tex_YqgF
Motif
Other DBs
NCBI-GeneID:
132907446
NCBI-ProteinID:
XP_060816550
LinkDB
All DBs
Position
5:complement(15547521..15554455)
Genome browser
AA seq
1740 aa
AA seq
DB search
MADYLDIEAEESEEEEQLSVKEKKKLKKLKALEDSEDEDDDEGDEGEVPGLIDDNSIDDD
NDGEDSDGSDDSRKRKKESDDEDFDDGLEDEDYDLLEENLGVKVERKRRFKRLRRMQDEE
SEGEEEKEIDAGRDAIANELFQGSGDEDEERSDVSPRGEAEGCDEEESDDEDDFIVDGDG
IPITEKRKRKRPIYSDAALQEAQDIFGIDFDYNDIEKYGEDEFEEEEEEEEDEYDEIEDR
PRPSKKHLKRKSTRKTIFEVYEPSELIRGHFTDVDNEIRTTDIPERMQLRAVPIMPTMEG
SDELDLEAEWIYKQAFCQPTISIQDSHLNEEAKERAKKGPQTIGKIKKALDFMRNQNFEV
PYIAFYRKEYVLPELNINDLWKIYKFDVKWCQLKQRKENLLKLFEKMRNFQLDEIMKNPD
APLPDNIRVIKDDDIERLKSAQTFEELNDIYRHFMLYYNQDVSSMQEIAHKKEKQAQRKA
KLEKRKQRRTEAEENGEDLPEEIPDAEDEEKIDDSLKQPVRKGPYYICRKAGLDGFTKKF
GLSPEHFAENLRDNYQRHEVDQDPIEPAIVANDFCSAIFTTSEEVLKAAQLMVAIQLAHE
PLVRKCVREMYMERAKVSVKPTKKGIKEIDEGHAIYGLKYIKNKPVRDLVGDQFLKLIVA
EEDKLITLSFSDMIEGNTSNNYIDEIKQLYYRDEFSKSVQDWNALRTGSVEVALNRIIIP
QLKKELRSNLLLEAKECVMKACCRKMYNWIKVAPYTCEFPDEDDEDWNTSKGIRVMAVAY
VPDLSQAAFTCIISPEGECTDYLRLPHLLKRKNSFRECEKILKEATLLGIKNFIATKKPH
VVVVSGESREALMIVSDIKECIANLAKEEQFPTIQVEICDNELNKVYAKSNRGISEFRDY
PELLREAISLARKIQDPLLEFSQLCTIDEEILCLKYHPLQDQLPKDDLIENLYLEFINRI
NEVGVDLNRAIQQPYTANLVQFVCGLGPRKGQALVKILKQTNQRLENRTQLITACHMGPK
VFVNCVGFIKIDTNSLGDSTEAYVEVLDGSRVHPETYEWARKMAVDALEYDDEDANPAGA
LEEILESPERLKDLDLDAFAEELERQGFGNKCITLYDIRAELNCRYKDLRIPYQSLNTEK
LFDVLTKETPETFYVGKLVLATVIGISHRRPQGDQLDQANPVRNDETGLWQCPFCLKNDF
PELSEVWNHFDAGACPGKATGIRLRLENGISGYIHVKNLSDKHVTNPEERVRIGQLIHCR
IIKIEVERFSVECTSKTSDLIDKNHEWRPQRDVYYEVEAEEKDTKTEEDAKKSQQRQTYV
KRVIIHPSFHNISFAEAEKLMLTLKQGEAIIRPSSKGSDHLTVTWKVTENIYQHIDVREE
GKENAFSLGRSLWIGNEEFEDLDEIIARHINPMAAYALELLDFKYYKTSVEGIKDKAEEI
LKEQKKQNPGGIPYIVSAAKNYPGKFLLSYLPRTRCRHEYVTVIPDGFRFRSQMFNRIND
LFRWFKEHFRDPIPGQVTPGTPHGTMTSRTPYNGTPGVNGLNPETIQRVAQNMPHHMLHS
LSKVANQTPHHYPPYTPGAASVNNYGMYGSTPYTPSGQTPFMTPYHTPHHTPHHPQTPSH
SQGPFLQPIPPAMNSNSHRTAKSHRSVSSTSDATNWTKAAEAWARSKQSSKEFNTTPRYD
ESRKTPRNKEAQNGRATPRNRTPSARTPSYKSPRETPFTNSSPRSMSLSGDGTPLYDESW
NT seq
5223 nt
NT seq
+upstream
nt +downstream
nt
atggcagattatttggatattgaagcagaagaaagtgaggaggaggagcaacttagtgtt
aaagaaaagaagaaacttaaaaaattaaaagcgttggaggacagtgaggatgaagatgat
gatgaaggagatgaaggagaagttccaggacttattgatgataattctatcgatgatgat
aatgatggtgaagatagtgatggatctgatgattctagaaaacgtaaaaaagagagcgat
gatgaagattttgatgatggtttagaagatgaagattatgacctacttgaagaaaatttg
ggagttaaagttgaaaggaaacgtcgttttaagcgtttacgtagaatgcaagatgaagag
tcagaaggggaagaagaaaaagagatagatgctggaagagatgctattgccaacgaattg
tttcaaggttctggagatgaggatgaagaaagaagtgatgttagtcctagaggtgaagcc
gaagggtgtgatgaggaagaaagtgatgacgaagatgattttattgtggatggtgatgga
atacctataactgaaaagaggaaaaggaaaagacctatatattcagatgctgcattgcaa
gaagcccaagatatttttggcattgattttgattataatgatattgaaaaatatggagag
gatgagtttgaagaggaagaggaggaagaggaggatgaatatgacgagatagaagaccgc
ccaaggccatcaaaaaaacatcttaaaagaaagagcacaaggaaaactatttttgaagta
tatgaacctagtgaacttatacgcggacacttcactgatgtggataatgagattcgtact
acagacattcctgaacgtatgcaacttcgtgctgttcccattatgcctacaatggaaggt
tcggatgaattagatcttgaagccgaatggatatataaacaggcattctgtcaaccaaca
atttcaatacaagattctcatctaaatgaagaagccaaagaaagagctaaaaagggtccg
caaacaatcggcaaaattaagaaagccttagattttatgcgtaatcagaacttcgaagtt
ccgtatattgcattttatagaaaagaatacgtgttgccagagttaaacatcaacgatttg
tggaaaatttataagtttgacgtaaaatggtgccaacttaaacaaagaaaagaaaactta
ttgaaactctttgaaaagatgaggaattttcaattagatgagattatgaaaaatcctgat
gctccattacccgacaacatacgagttattaaagacgatgatattgaacgacttaaaagt
gctcagacatttgaagaattaaatgatatttatcgacattttatgctatattataatcag
gatgtgtcatccatgcaagaaattgcacataagaaggaaaaacaagcacaaaggaaagct
aaattggagaagagaaagcaacgacgtacagaagctgaagaaaatggagaagatttacct
gaagaaattcctgatgcagaggatgaagagaaaatagacgattcattaaagcagccggtt
aggaaaggtccttactatatttgcagaaaagctggcttagacggatttactaaaaaattt
ggtctctcacccgaacattttgctgaaaatcttcgagataattatcaacgtcatgaagta
gatcaagatccaatagaacctgcaatagtagcaaatgatttttgttctgcaatatttacg
acaagtgaagaagtacttaaagctgcacaattaatggttgcgattcagttagcgcacgaa
ccattagttcgtaaatgcgttagagaaatgtatatggagagagcaaaagtgtccgtaaaa
ccaactaaaaaaggaataaaggagatagatgaaggacatgccatttatggattaaaatat
atcaaaaataagcctgtacgggatcttgttggtgatcaattcttaaaactaattgtagca
gaagaagataaattaattacactttcctttagtgacatgatagaaggaaatactagcaat
aattatatcgatgaaataaagcaactttattatagagatgaatttagtaaaagtgtccaa
gattggaatgcattaagaactggtagtgttgaagtagctttaaatcggattattatacct
caattgaaaaaagaattgagatccaatcttttattagaagcaaaagaatgcgttatgaaa
gcgtgttgccgcaaaatgtacaattggataaaagttgctccatatacttgcgaatttcct
gatgaagatgatgaagattggaatactagcaaaggaattcgtgtgatggctgtagcatat
gtgcctgatctgtctcaagctgcctttacgtgcataatttctccagaaggagaatgtact
gattacctaagattaccgcatttattgaaacgtaaaaatagttttagggaatgtgaaaag
atattaaaagaggcaaccttactaggaattaaaaattttattgccacaaagaaaccacat
gttgtggtagtaagtggtgaatctagagaagcattaatgatagtatctgatataaaagaa
tgtatagctaatcttgcaaaagaagaacaatttcctacaatccaagtggaaatatgtgat
aatgaacttaataaagtttatgcaaagagtaatagaggtatatctgagttcagagattat
ccagaattattaagagaagctatatctttagcaagaaaaatacaagatcctctattagaa
ttctctcagttgtgtaccatagatgaggaaattctgtgccttaaatatcatcctttgcaa
gatcaacttcctaaagacgatcttatagaaaatttatatttggaatttataaatcgcata
aatgaagtaggagtagatttaaatagagcaattcagcagccttatacagcaaacctagta
caatttgtgtgtggcttaggacctagaaaaggacaggctctggttaagattttgaaacaa
actaatcaaagactagagaatagaacacagcttataacagcatgtcatatgggacctaaa
gtgtttgtcaattgtgttggttttattaagattgatacaaatagtttaggagatagcaca
gaggcatatgtagaagtactagatggctcgcgtgtacatccagagacatatgaatgggca
agaaaaatggcagtagatgctttagagtatgatgatgaagatgcaaatcctgctggtgcc
ctagaagaaattcttgaatcaccagaaagattaaaagatttagatttagatgcatttgca
gaggaacttgaaagacagggttttggaaacaagtgcattactctttacgatataagagct
gaactgaactgtagatacaaagaccttcgtataccttaccaatctctaaatactgaaaaa
ttatttgatgttttgactaaagaaactccggaaactttctatgtcggtaaattagttttg
gcaacagtcattggtataagtcatagaagacctcaaggagatcaattagatcaagcgaat
cctgttcgaaatgatgaaactggattatggcaatgtccattctgcttgaaaaacgatttt
ccagaattgtccgaggtatggaatcattttgatgctggtgcatgtccagggaaagcaact
ggaattcgtttaaggttggaaaatggaatatctggatatattcacgtaaaaaatctgtct
gataaacatgtcactaatccagaggaaagagtacgtatcggacaactaattcattgtcgc
ataattaagatcgaagtagaacgatttagtgttgaatgtactagcaagacgagtgatctt
attgataaaaatcacgaatggagacctcagcgagacgtttattatgaagtagaggcagaa
gaaaaagatacgaaaacagaggaggatgctaagaaatcgcaacaacgccaaacttatgta
aaacgtgttataattcatcctagtttccataatataagttttgcagaagctgaaaagtta
atgctaactttgaagcaaggggaagcaataatacgacctagcagtaagggatctgatcat
ttgactgtaacatggaaagtcacagagaatatttatcaacatattgatgtaagggaagaa
ggcaaagaaaatgcattctctttgggtcgcagtttatggattggcaatgaagaattcgaa
gatttggatgaaattatcgctagacatattaatccgatggctgcttatgctttggaactt
ttagattttaaatattataaaacaagtgtagaaggcattaaagataaagcagaagaaatt
ttgaaggaacagaagaagcaaaatcctggagggataccatatattgtgtctgcagctaaa
aattatcctggaaaatttttactttcgtatttaccacgaactcgttgccgtcatgaatat
gttactgtaatacctgatggatttcgatttagaagtcaaatgtttaatagaataaatgac
ttgttccgctggttcaaagaacactttagagatcctataccaggacaagttacacctggt
actccacatggaactatgacttccagaacaccatacaatggtactccaggagtgaatgga
ttgaatccagaaacaatacagagggtagcacagaatatgccacaccacatgttacattca
ctctcgaaagtagcaaatcaaactccacatcattatccaccatacactccaggagctgct
agtgttaataactatggaatgtatggaagtacaccttatacaccttccggccaaactccg
tttatgaccccctaccatacaccacaccacacgcctcatcatccacaaacacccagtcat
tctcaaggaccattcttacaaccaattcctccagcaatgaattcaaattcacatagaact
gcaaaatcacatagatctgtctctagtacttctgatgcaacgaattggacaaaagcggcg
gaagcatgggctcgatcaaagcaatcttcgaaagaatttaatactactccaagatatgat
gaatctagaaaaacgccaagaaataaagaagctcaaaatgggagagcaactccgcgcaat
agaaccccatctgctcgtactccgtcttataaatctcctagagaaactccatttacaaat
tctagtccccggagtatgtctctaagtggagatggtactcccctatatgatgaaagttgg
taa
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