Bombus pascuorum (common carder bee): 132907516
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Entry
132907516 CDS
T09597
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
bpas
Bombus pascuorum (common carder bee)
Pathway
bpas03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
132907516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpas03021
]
132907516
03036 Chromosome and associated proteins [BR:
bpas03036
]
132907516
Transcription machinery [BR:
bpas03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
132907516
Coactivators
SAGA/TFTC/STAGA complex
132907516
Chromosome and associated proteins [BR:
bpas03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
132907516
STAGA complex
132907516
TFTC complex
132907516
SAGA complex
132907516
SLIK complex
132907516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_HPS5
RMC1_N
WD40_like
PEP5_VPS11_N
Beta-prop_WDR35_TULP_N
Cytochrom_D1
Beta-prop_DCAF12
Beta-prop_NWD2_C
VPS8_N
DUF5713
Motif
Other DBs
NCBI-GeneID:
132907516
NCBI-ProteinID:
XP_060816668
LinkDB
All DBs
Position
5:complement(2750735..2753852)
Genome browser
AA seq
652 aa
AA seq
DB search
MDNDKSTMLAVLQLLRKYNLKGTEELFKKEANLIDISPDEAQQTDSEVNSVLSAYKSEGD
PVLYEKAYSELKKFVEGSLDIYKHELGTILYPVLVHMYLELVYNNHSEEAKQLLERFGGN
LEEYYQNDLKRLSNVTKREQMAGNELTDTFKSNQFIIRMSRDTLSILKRHLQEKKHCVLL
NIIQEHLYFDMYEGVARNKQQIDATSGAMVGEATRQDNKAKVYYGLLKEPDIQCMPPTEE
EEDDTGGIDGDKPKKKKAKKDPLFSKKTKSDPNAPPVGRMPLPNLKDADKLEKGKALREA
SKRVVLGPDTLPSICFYTLLNAVHSVTAAEVAEDSSLLAIGFSDSCIKVWSLVPQKLRLM
KTGEQLQDIDREADDVLVRMMDDRTAETSRSLFGHNGPVYSLSFSPDRNLLLSSSEDSTV
RLWSLHTWTCVVCYKGHLFPVWCVKFSPHGYYFATSSHDKTARLWATDSHQPLRIFSGHY
SDIDVVQFHPNSNYVATGSSDMTVRLWDCVNGSQVRLMTGHKAPIYSLAFSAEGRFLASA
GADHRVLVWDLAHGHLVAALSSHSGTIHCLSFSRDGNILVSGSLDCTIKLWDFTKLADEM
SLEDVNVSHNPDVKTNTESYLLRTFATKNTPVLALHFSRRNLLLSVGMFDST
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggataatgataaaagtactatgctggcagttctgcagctacttagaaaatataatttg
aagggaacagaggaattatttaaaaaagaagcaaatttgatagacatttctccagatgaa
gctcaacaaactgattctgaggtgaacagtgttctttctgcctacaaaagtgagggagat
cctgttttatatgagaaagcatatagcgaactaaaaaaatttgtagaaggatctttagat
atatataagcatgaattaggtacaattctatatccagttttggtacatatgtaccttgaa
ttggtttacaataatcattctgaagaagcaaagcaattactggaaagatttggtggaaat
ttagaggaatattatcaaaatgacttgaaaagattgtccaatgtcacaaaacgtgaacaa
atggctggaaatgaattgaccgatactttcaaatctaatcaattcataatcagaatgtcg
agggatacactctctatattaaaaagacatttgcaagagaagaaacactgcgtgttgtta
aatattatacaagagcatctttattttgatatgtacgaaggagtagctaggaacaaacag
caaattgatgccacatcaggtgcaatggttggtgaagcaacaagacaagacaataaggcg
aaagtatattatggacttttgaaggaaccagacattcaatgtatgcccccaaccgaagaa
gaagaggatgatacaggtggtatagatggagataaaccaaaaaagaagaaagctaaaaag
gatccattgttttctaaaaaaactaaatcggatccaaatgcaccacctgttggtagaatg
cctttgcccaacttaaaagatgcggacaagttggaaaaaggaaaagcattaagggaagcg
tcgaaacgcgtcgtacttggtcctgatactttgccatctatatgcttttatacgctattg
aatgcggtacatagtgtgacagcagctgaagtagcagaagattcgagtttgctggccatc
ggatttagtgactcttgtataaaggtctggagtctggttccacaaaaattaagactgatg
aagacaggagaacaattacaggacatagatagagaagcagacgacgtactagtaagaatg
atggacgatcgtacagcagaaacatcgagatcgttattcggacacaatggtcctgtatac
agtctatcatttagtccagacagaaatctcctcctttcgtcatccgaagacagtacagtg
aggctgtggtctctgcatacatggacgtgtgtagtatgctacaaaggacacttattccca
gtatggtgtgtaaaattttcgcctcatggttattatttcgcaacttcctctcacgacaaa
accgccagactctgggcaactgattctcatcaaccacttcgaatattttccggccactat
tcagacatagatgtagtacagttccatccgaattcaaactacgtagcaaccggttccagc
gacatgacagtaagattatgggactgcgtaaacggcagccaagtcaggttaatgacagga
cacaaagctccgatttattcccttgccttctccgcggaagggcgatttctggcttcagcc
ggtgctgatcaccgtgttttagtttgggatttagcacatggtcatcttgtcgctgcctta
tcgagtcattcgggtactattcattgcttgtcatttagtagagatgggaatattctagtc
tcaggatcgttagattgtacgatcaagttgtgggattttacaaaactcgccgatgaaatg
agtttggaggatgtaaatgtttcacacaatcccgatgtaaaaacgaatacagaatcttat
ctcctccgaactttcgcgacaaaaaacactcctgtgttagcgctacatttctcgcgaaga
aatttactcttaagcgtcggtatgttcgattcaacttag
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