KEGG   Bombus pascuorum (common carder bee): 132907525
Entry
132907525         CDS       T09597                                 
Name
(RefSeq) negative elongation factor D isoform X1
  KO
K15181  negative elongation factor C/D
Organism
bpas  Bombus pascuorum (common carder bee)
Pathway
bpas03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:bpas00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    132907525
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bpas03021]
    132907525
Transcription machinery [BR:bpas03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     132907525
SSDB
Motif
Pfam: TH1 TPR_Vps8
Other DBs
NCBI-GeneID: 132907525
NCBI-ProteinID: XP_060816684
LinkDB
Position
5:12272683..12300003
AA seq 583 aa
MEIMESDYDEDRGAWTEEMTRSEDCIGEDSFDNPQEILNECLDKFKTPDYIMEPGIFAQL
KRYFQAGGNPEQVIELLSKNYTACAQMANLLAEWLILAGVKVTDVQAMVENNLKDMILKT
FDPKKADKIFTEEGETPAWLTEMIQHPTWRSLIYRLAEEYPDCLMLNFTIKLISDAGFQG
EITSISTAAQQIEVFSRVLKTAIAGFLQNTEDWQSSIQECAKMVCHGQHTYVYSQVLLQI
LAQESRGGFMMKRLSQEITKCAQQNHHDVTPITMALNGASSSPSACQALASMLSRNTLNP
ADITVLFRNYSTAEPPPIELLRNPQFLELLVDALFKPGVKINPEHKSKYIYLLAYAASVC
DIPAKKGHSRKLNKDELKTTIQAIEKVHNICNINKGSTELIAELQILYQCIRFPVVSVGI
IRWVECTVTEPSYFKLCTEHCPVHLALLDEVVVCHSLLHPKVLQLLVQLFESKQDELEIL
VQLEMKKMLIDRMVNLLSRGCVVPVVCYIKQCWQRGDTDVSLIRYFVTEVLEAIAPPYTA
EFIHLFLPMVEDEEITGTMRGDSDNDLVSEFIVHCKAHCPTIR
NT seq 1752 nt   +upstreamnt  +downstreamnt
atggaaataatggagtcagattatgatgaagatcgtggagcttggacagaagaaatgaca
agaagtgaagattgcataggagaagatagttttgataatcctcaagagatattaaatgaa
tgcttggataaatttaaaacaccagattacatcatggagcctggtatctttgcacaactt
aaaagatattttcaagctggaggaaacccagaacaagtgatagaattgttatctaaaaat
tatacagcttgtgctcaaatggcaaatcttcttgcagaatggcttattcttgctggagtt
aaagttacagatgtacaagcaatggtagaaaataacttaaaagatatgatattgaaaaca
tttgatcccaaaaaagcagataaaatctttacagaggagggtgaaactcctgcttggtta
acggaaatgatacaacatcctacttggcggtcacttatttacagacttgcagaagaatat
cctgattgcttgatgttaaacttcaccataaagcttatatctgatgctggatttcaaggt
gaaattacaagcatttcaacagctgcacaacaaattgaagtattttcacgagttttaaaa
actgcaattgctggatttttgcaaaatacggaagattggcagtcaagtatacaagaatgt
gcaaaaatggtatgtcatggacaacacacctacgtttacagtcaagtattgttgcaaatt
cttgcacaagaatcacgtggtggatttatgatgaaaaggctttctcaggaaatcactaaa
tgtgctcaacagaaccatcatgatgttactccaataacaatggcacttaatggagcttca
agtagccctagtgcatgtcaagcacttgcatccatgttatcacggaataccttaaatcct
gctgatattactgtattatttcgaaattattctactgcggaaccacctcctatagaatta
cttcgtaatccacaattcttagaactattagttgatgcactttttaaaccgggtgtaaaa
attaatcctgagcataagtctaaatacatatatttattagcttatgcagctagtgtatgt
gatattccagccaagaaggggcattcacggaaattaaataaggatgaattaaaaacaact
attcaagctatagaaaaagtccataacatatgtaacattaataaaggatctactgaattg
atagcagaattacaaattttatatcagtgcataagatttcctgttgtaagtgtaggtata
attagatgggtggagtgtactgtaaccgaaccatcatattttaaattgtgtacagaacat
tgtcctgtacatcttgcattacttgatgaagttgtagtttgtcattctttactgcatcca
aaagtgttacaacttcttgtacagttatttgaaagtaaacaagacgaactggaaatactt
gtgcagttggaaatgaaaaaaatgttaattgatagaatggtgaacttattaagtagaggt
tgcgtggtaccagtagtgtgttatatcaaacagtgttggcaacgtggagacacagatgta
tcattaattaggtattttgttacagaggttttagaagcaatagctccaccatatacagct
gaatttattcatttatttcttcctatggttgaagatgaagaaattacaggtacaatgcgt
ggtgatagcgacaatgatcttgtttcagaattcatagtacattgtaaagcacattgcccg
actataagatga

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