Bombus pascuorum (common carder bee): 132907549
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Entry
132907549 CDS
T09597
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
bpas
Bombus pascuorum (common carder bee)
Pathway
bpas03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132907549
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpas03019
]
132907549
03036 Chromosome and associated proteins [BR:
bpas03036
]
132907549
Messenger RNA biogenesis [BR:
bpas03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
132907549
Chromosome and associated proteins [BR:
bpas03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
132907549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
132907549
NCBI-ProteinID:
XP_060816736
LinkDB
All DBs
Position
5:complement(2134673..2144877)
Genome browser
AA seq
1882 aa
AA seq
DB search
MFGQAGNTSFSSFNTPTQSSPFGQSAFGKPITTTSFGSGATPVFGNGNTSLFSSKPAGST
TGGLFGNTTTPPAFTQPSFGGFGTTSTNTNLFGSQQNASTNLFGSNTATSAFGQSNKPAG
FGFGTTSGTNLFGQPQQSAQQTTPFGQSSTTGNTNLFGATPGFGNTNTATTSITGTAIKF
APMITTDSMSKNGISHTISVRHCCIATMKEYESKSYEELRFEDYSVGRKGPSTGIFGAPT
QPSPFGNAGAGTSTATTGFGGMSAGFGATTQSASSGLFGKPISTFGTPSTTTTNNFAFNS
TPSTNLFGTNTQNKPFGTAAPTPLFATSNTNQTAGTGFGGINTGQNTAFGSAFGSAQPNQ
SIGLFNQNKSAFIAPSTSSSTGFPIFGQTPMSNTGTPAFCSKSTGTIGFGVNSTLGSTAP
STFGTAPGFTAGQNSGTLLFNTPFKPAGQTSGFSFGSTLTPSSGLGTNTGLMLGSGSTLF
GQQKSGGLFGYSGNNAPFNTSGSFGSSAFGNNTNVGTGSGTGLLGAGNTMNQVKSSGTVP
VHQQILALVSAPFGDSPLLKNLLPASGKTEELLKPANTPSKLMNGQQYKVTADNKSPKIK
AKVVTPAQLSKKSMFEGLEEEDPLSEAFQPRPNAKRLVLRPKSISNSIVPSPTESSQSVG
RNLQSSGKGEEKSPVTNTYIENTTIETVDKENHSQDNNRQLANDRRSSLSWLKTSLPRNA
KNLDEESYEAQRSLFSSPNALSEEMINNTVTELRPYANANSSNQKCSEINSSVDTSLKNS
SLVDKSCTDIVNQNSDSSQELDESSFSSLQTSNWKPNAAKVTLKRAGYYTIPPLDKLDEY
VRGETCIVPNFTVGREDYGNVYFPESFDIYGLNLDEIVHFRHKEVIIYPDDEKKPPIGEG
LNRKAQVTLDQVWPHDKSLHKPITDPHRLAAMDYEEKLRRVSAKHDTRFLEYRPETGSWV
FKVDHFSKYGLSDSDEEDNNIPSVKDTKRLKLCATQQKCATKQEQSKVVSNKDTSKANDL
KAANTDYSDLDTRGLLLEAIVSRRSFRTDQNHENQLPISPTGENARILGTDSHKLQLMKA
SFFDGSDEEINEAYNQESNRSLFLSDRRSSLRCFTNTPQKLDEDQNYEPIYSPMLRSNLA
IHRTPTITYEEPTLSKTDSKLKRSMDIVAKTSTIYEKGLPDPSITPVTTILRCISEVIPL
SKSIIHKLESRSVADIGIQMGRRFKPSWGRGLTLLTLSTKKQADDVPLNNSFEQIGSYVC
GRSPEDTTSVGIVQRIQILGGSGTGEERIKTFKESIEGHLKIQLSHRVMNPDGDCLIFDV
DTDINKASMALHAHCSLAEEFAEQFTTDSFASYVANVWKLCVALWGNLPDINVATENSED
HSVVIARREAIGEWLKIVIRKTHVLEDADINYETKILLLLSAFELEEACKLAREMGDHCL
ALLMAQLCSGMPIKVLTQQQIALWQNAGIDENLSLDRLKLFALVAGEPPSKHCPINVCEG
FDWKRALAVHLWYFSSPTASIRDILDIYEASFDTNKTDDVYTSIPKPEYKGNNFELEINN
GKPIYDLCFHLLKLFCTGNHTLGELLNPATHTADPMDYRLSWLMQQVLLALGYSHLSEHV
AILTHVNFATQLEAYDLWHWAIFVMLHLKDATKRKTAVMNLLQRHVEIDDATDCPDFIER
ETFLREELGIPSIWIHHAKAVKSYVAKRYGKAAFYFIQAEQWNKAHEIIIEYLAADVIIN
ENYDYLRNLLRPLTPLECSSAISGWTYQGQLLWEYMEITMSVESLLRSADPRGISSKLES
LKQRLSNLPSKINQFPCLTAKHRLCQAEIAKRTIHLARSLLQMNENKSKSIYQLVSQLPL
PEDYAQQELRFVINMCVNEIIY
NT seq
5649 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtcaagctggaaatacatcttttagtagttttaatacaccgacgcagtccagt
ccatttgggcaatctgcgtttggtaaaccgatcactacaacaagttttggttctggcgct
acaccagtctttggcaatggcaatacttctctctttagttcaaagcctgcaggttctacc
accggtggcttgtttggcaatactacaactccacctgcatttactcaaccatcttttgga
gggtttggtacaacaagtacaaataccaatttatttggctctcagcaaaatgcaagtaca
aatctttttggttcaaacactgcaacatcagcatttggtcagtcgaataaaccagctgga
tttggttttggtactacatctggtacaaatttatttgggcaaccccaacaatcagctcag
caaaccacaccttttgggcaaagcagtaccactggaaatacaaatttatttggtgcaaca
cctggttttggcaatacgaacacggcaaccacaagtataactggtactgccattaaattt
gctcctatgattactaccgattccatgtccaagaatggtatatctcatactatatcagtg
agacattgttgcattgcgacaatgaaagaatatgaatcaaagtcttacgaagagttacgt
tttgaagattattctgtgggacgaaaaggacccagtacaggaatctttggtgcaccaaca
caaccttcaccttttggtaatgcaggggcaggtactagtactgcaacaacgggctttggt
ggaatgagcgctggttttggagcaaccacacagtctgcctcgagtggtctatttggaaag
cctataagtacttttggtacaccctcgacaacaacaacaaataattttgcttttaattct
actccaagcactaatctgtttggtactaatacccagaataaaccatttggtacagcagct
ccaaccccactttttgcaaccagcaatactaaccaaactgctggtacaggtttcggtggc
attaatacgggtcaaaacactgctttcggctccgcatttggttcagcgcaaccgaatcag
agtattggtctatttaaccaaaacaaatcagcttttattgcaccttccacatcgtctagc
actggatttcccatttttggtcagacaccaatgagcaatacgggtacacctgcattctgt
tctaaatcaactggaacaataggtttcggagtaaattcgactttaggttcgactgcacca
tcgacttttggaactgcaccaggtttcactgcaggtcaaaattccggtactttgttgttt
aatacaccttttaagcctgcaggacaaacatctggattttcttttggttcaactcttaca
ccatcgtccggactcggtacaaatacgggtttaatgttgggtagtggttctactttattt
ggtcagcaaaaatcaggtggtttgttcgggtacagtggcaataatgcaccatttaataca
tcgggatcgttcggatcttcagctttcgggaataatacaaatgtaggaacgggtagtggg
actggattactcggagctggaaatactatgaaccaagtcaaaagttccggaactgtgccg
gtgcatcaacaaattttagccctggtgtctgcaccttttggcgattcaccgttattaaaa
aatcttttaccagcttccggtaaaacagaagagttattaaaaccggcaaacacaccatcc
aaattaatgaatggtcaacagtataaggttactgctgataataagtctccaaaaatcaag
gccaaagttgttactcctgcacaattatctaagaagtcaatgttcgaaggtcttgaagag
gaagatccactctcggaagcatttcagcctcgtccaaatgcaaagcgtttggtactacgt
ccgaaatccatatcgaactcgatagttccatcgcctactgaaagttcacaatctgtaggg
agaaacttacaatcttccggaaaaggggaagagaaatcacctgtaacaaatacatatatt
gaaaatacaactatcgaaactgtagataaagaaaatcatagtcaagataataatcgacaa
ttagcaaacgatcggagatcatctttgtcttggttgaaaacgagccttccacgaaatgca
aaaaatttggacgaagaatcatacgaggctcaacggtcgctattttctagtccgaacgca
ttgtcggaagagatgataaacaatactgttactgaattgcgaccttatgctaacgccaat
tcatcaaatcaaaagtgctctgaaattaattcatccgtggatacgtctttaaagaattca
tctctcgttgataaatcatgtacggacattgtgaatcaaaactctgattcgagtcaagaa
ttggacgaaagttctttttcatcgttacaaacttcgaactggaaaccaaacgcagctaaa
gtaacgctgaaacgtgctgggtactatacgattccgccgcttgataaattagacgagtat
gttcgtggtgaaacgtgtatcgtaccaaacttcactgttggacgtgaagattatggaaat
gtgtatttccctgaatcgtttgatatatatggcttgaatttagacgaaatcgtacatttt
cgacataaggaagtcatcatttatccagacgacgagaagaaaccacctatcggagaagga
ttaaatcgtaaagcacaagttactttagaccaagtatggccacacgataaatctctacat
aagcctattaccgacccccatcgtttagctgcgatggattacgaagaaaaattacgaaga
gtgtcagcgaaacatgatactagattcttagagtatcgacctgaaactggttcatgggtt
tttaaggtagatcatttttctaaatatggcctaagcgattcggacgaagaagataataat
atcccttcagtaaaggacacgaaaagattaaaattatgtgcaactcagcaaaaatgtgca
accaagcaggagcaatcaaaagtagtttcaaataaagatacttccaaggccaatgattta
aaagcagcgaatacagactattcagatttagatacacgtggacttctcttggaagcaatt
gtctcacgtcggtcgtttagaacagatcaaaatcatgaaaatcaactaccgataagtcca
actggtgagaatgctcgcattttgggtacagacagtcataaactgcaattaatgaaggcc
agcttctttgatggcagcgacgaagagattaacgaggcttataatcaagaatcgaatcgc
tcgttatttctttccgatcgtagaagttctttgcgatgtttcaccaatacgccacaaaaa
ttagacgaagatcaaaactacgaaccaatttacagtccgatgttacgatcaaatttggca
attcatcggacgccaactattacttacgaagaaccgaccctttcaaagacagattccaaa
ttgaaacgctcgatggacatcgttgctaagacatcaacgatatatgaaaaaggtttaccg
gatccttcgataactccggtgactacaattcttcgatgtatttctgaagtgattccgtta
tcaaaatctattatacataaactggaatctcgttccgttgctgatattggtatacaaatg
ggaagaaggtttaaaccaagctggggacgtggtttaaccttacttacattgagtacgaag
aaacaggccgacgatgtaccattaaataattcttttgagcaaattggatcttacgtatgt
ggtcgttctccggaagatacaacatccgttgggatagtccaacgtatacaaattttgggt
ggtagtgggaccggcgaagaacgcattaagacattcaaagaaagtatagaaggtcatcta
aaaattcagctgtcacatcgtgtaatgaatccagatggagactgtctaatttttgacgta
gatacagatattaataaggcgagcatggctttacacgcacattgtagtttagccgaagaa
tttgcagaacagtttaccacagattcatttgcttcctatgttgctaatgtttggaaactc
tgtgtagctctttggggaaatttacccgatataaacgttgccacagaaaattcagaagac
catagcgtcgtgattgcgcggcgagaggcaatcggggaatggttaaaaatcgttataaga
aaaactcatgtgttggaggatgcggatattaattatgaaacaaagatattgcttttacta
tctgctttcgaattagaagaggcgtgtaaacttgcaagagaaatgggtgatcattgtttg
gccttattgatggcgcagctgtgtagtggaatgcctataaaggtattaacacagcagcaa
attgcattatggcaaaatgccggtattgatgaaaacctctcgttagatcgactaaagctt
tttgcattggtggcaggtgaaccaccaagtaaacattgcccgatcaatgtctgtgaaggt
ttcgattggaagagagcgttagctgttcatttgtggtatttttcatctccgactgcctct
ataagagacatattagacatttacgaggcctccttcgatacaaacaagacagatgacgtt
tatacgtcgataccgaaacccgaatataaaggaaacaatttcgaacttgaaataaataat
gggaaaccgatatatgatctatgttttcatcttttaaagttattttgcactggcaatcat
acgttgggtgaattattgaatccagcaacacatactgctgatccaatggattacagactc
agttggctgatgcagcaagtacttttagctttgggttattcacatctttcggaacatgtt
gccattttgacacatgttaatttcgcgacacaattagaagcatatgatctctggcattgg
gccatattcgtaatgttacatttaaaggatgccacaaaaaggaagaccgcggtaatgaat
ttattgcaacgacacgtcgaaatagacgatgctaccgattgtcctgattttatcgagcga
gaaacgtttttacgggaagaattgggtataccttcgatttggattcaccatgcgaaagcc
gtgaaaagttacgtagctaaaagatacgggaaagcagctttctattttattcaagcagaa
cagtggaataaggcgcatgaaattattattgaatatttagcagcagatgttataataaac
gaaaattacgattatctgcgcaacttattgcgtccactgactcctttagaatgcagtagc
gctataagtggttggacatatcaaggacaattactctgggaatatatggaaataactatg
agtgttgaatctttgctacgtagtgccgatccacgtggaataagttctaaattggaatca
ctaaaacaacgattgtcaaatcttccttccaagatcaatcaatttccatgtttaactgcg
aaacataggctttgtcaagcggaaattgcaaagagaacgatccacttagccaggagtttg
ttacaaatgaacgagaataaatctaaatcgatatatcaattggtatctcaattaccattg
ccggaggactatgcacaacaagagcttcgttttgtcattaatatgtgcgtgaacgaaatt
atatattag
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integrated database retrieval system
