Bombus pascuorum (common carder bee): 132907552
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Entry
132907552 CDS
T09597
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
bpas
Bombus pascuorum (common carder bee)
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpas03021
]
132907552
03036 Chromosome and associated proteins [BR:
bpas03036
]
132907552
Transcription machinery [BR:
bpas03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
132907552
Chromosome and associated proteins [BR:
bpas03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
132907552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
S1
SH2
HHH_3
HHH_9
Tex_YqgF
Spt6_S1
HTH_10
S1_RRP5
OB_RRP5_4th
Tex_N
eIF3h_C
Motif
Other DBs
NCBI-GeneID:
132907552
NCBI-ProteinID:
XP_060816745
LinkDB
All DBs
Position
5:2414741..2421958
Genome browser
AA seq
1767 aa
AA seq
DB search
MADFLHSEAEESEEEKELDDNEKKKLKKIKAMEESDEEEEEDDEDRLREELKDLIDDNPI
EESEGEDSDASGVSQKRKKSDDEDFDDRLEDEDYDLIEENLGVKVERKRFKRLRRIQDEE
SEEEQEKEADDDRDAIANELFEGSGDEDERRSERSHRPEVDTFDEEGSEGEYTDADDFIV
DDDGRPIAEKRKKKKPIFSDAALQEAQDIFGVDFDYDEFGKYGEEDYEEEEEEEEEDEED
EYMDDEDAERPRRPKKQLKKKTTRKSIFEIYEPSELKRGHFTDMDNEIRNTDIPERMQLR
TVPVTPVAEGSDELDLEAEWIYKQAFCRPTISIQDAHLNAEAKERARKGPQTIGKIKKAL
DFMRNQLFEVPFISFYRKEYVLPELNINDLWKVYKFDAKWCQLRQRKENLLKLFDKMRNY
QLDEIMKNPDAPLPDNVRLIKDDDIERLKNVQTSEELNDVYHHFMLYYSHEIPTMQEAAR
QKEKEARKEAKIQKRKQQIADAEENGEDPLPEEEPDVEEEEEADETLKQAVRTGPYSICR
RAGLDNLAKKFGLTPEHFAENLRDNYQRHEVDQEPTEPLTIANEYCSQILNSSEEVLKAA
QLMVAIQLAREPLVRKCVREMYMERAKISVKPTKRGIKEIDENHPVYGMKYLKDKPVRDL
VGDQFLNLVIAEEDKLITITLSDSIEGNTSNNYVDEMKQLYYRDEFSKNVQDWNALRVGS
VEMALTRIVLPSLKKELKANLIAEAKECVMRACGRKMYNWIKVAPYTCEFPEEEDEEWDT
SKGLRVMGLAYVPEYSQAAFTCLIAPDGECTDYLRLPHIMKRKNSYREDEKAMKEADLLA
IRNFIATKKPHVVVIGGESREAMMIAADIKECIANLVEEEQFPNIKIEIYDNELAKIYSN
SNKGISEFRDYPELLRQAISLGRRMQDPLVEFSQLCTADEEILCLKYHNLQDQLPKDELL
DNLYLEFVNRVNEVGVDVNKAVQQAYCGNLVQFVCGLGPRKGQALIKMLKQTNQRLENRT
QLVTSCHMGPKVFINCAGFIKIDTNSLGDSTEAYVEVLDGSRVHPETYEWARKMAVDALE
YDDEDANPAGALEEILESPERLKDLDLDAFAEELERQGFGNKCVTLYDIRAELNCRYKDL
RVPYQSLSAERLFDILTKETPETFYVGKLVLATVIGISHRKPQGDQLDQANPVRNDETGL
WQCPFCLKNDFPELSEVWNHFDAGACPGKATGVRLRLDNGISGYIHIKNLSDRHVANPEE
RVSIGQIIHCRIIKIEVERFSVECTSKSSDLADKNHEWRPQRDPFYDTEAEQRDAKVEED
AKKAKQRQTYVKRVIVHPSFHNISFAEAEKLMQTMKQGEAIVRPSSKGADHLTVTWKVTD
EIYQHIDVREEGKENAFSLGQSLWIGNEEFEDLDEIIARHVNPMAAYASELLDFKYYKQA
VEGIKDKAEEILKEQKKENPGGIPYIISAAKNYPGKFLLSYLPRTRCRHEYVTVSPEGFR
FRGQMFGRVNDLFRWFKEHFRDPVPGQSTPSTPRGAMTSRTPYHTTPGAVSGMNQEAIQR
VAQNLPHHMLHSLSQVANQTPHHYPPHTPGTANATGYGGVHTYPNTPYTPSGQTPFMTPY
QTPHHTPHHHSQPTPRYGQQTPNHQQGPFIHPPPPSGITSTGHHRSTPSHRPTPPMSTSG
DPMDWKKAAEAWARLKSGPRVSTTTPRYEESRRTPRNYEESVGRTTPRNRTSNRTPSYKS
PRGTPHTNSSPRSMSLSGDGTPLYDES
NT seq
5304 nt
NT seq
+upstream
nt +downstream
nt
atggctgattttttacattcagaagcagaagaaagcgaggaggagaaggaattagacgat
aatgaaaaaaagaaactgaagaaaataaaagctatggaagaaagtgatgaagaagaagag
gaagatgatgaggatcgtttacgggaggaacttaaggatctcattgacgacaatcctata
gaagaaagcgagggagaagatagtgatgcttctggggtatctcaaaaacgtaaaaaaagt
gatgatgaggattttgacgatcgtttggaagatgaagattatgatttgatagaagaaaat
ttaggagtcaaagttgaaagaaaacgtttcaaacgcctccgaaggatacaagatgaggaa
tcagaggaggaacaggaaaaagaggcagacgatgatagagatgctattgcaaacgaactt
ttcgaaggttctggcgatgaagatgaaaggcggagcgaacgtagtcacagacctgaagtc
gacacatttgacgaggaaggaagtgaaggagaatacaccgacgctgatgattttatcgtt
gacgatgacggtagaccaattgccgagaaacgcaaaaagaagaagccaattttttctgat
gcagctttgcaagaagcacaagacatttttggtgttgattttgattatgatgaatttggt
aaatacggcgaagaggactatgaggaggaagaagaggaagaagaagaagatgaagaagat
gaatacatggacgatgaagacgccgagagaccgcgaaggccgaaaaaacagttgaagaag
aaaacgacgagaaaaagtatttttgaaatttacgaaccaagcgaacttaaacgcggtcat
tttaccgatatggataatgaaatacggaacacagatataccggagagaatgcaactccgt
actgttcctgttacgccagttgcagaaggttctgatgaactagacctagaggcagagtgg
atctataaacaggcgttctgtcgaccaactatttcaattcaagatgcacacctaaacgct
gaggctaaagaaagagctcggaaagggcctcaaacgatcggtaaaattaagaaagctttg
gacttcatgcgaaatcaactattcgaagtacctttcatatcgttttatagaaaggaatat
gtcctaccggaactaaacattaacgatctctggaaagtgtacaaatttgacgccaaatgg
tgtcaacttcgtcaaagaaaagaaaatttattaaaattatttgataaaatgcgaaattac
cagttagatgagattatgaaaaatcctgatgctccattaccagataacgtacgattgatt
aaagatgacgacatagaacgattgaaaaatgtgcaaaccagcgaggaattaaatgatgtt
tatcaccacttcatgttatactatagtcacgagataccaacaatgcaagaagctgctcgt
cagaaggagaaagaagcacggaaagaagcaaagattcaaaaacgaaaacaacaaattgcg
gatgccgaggaaaacggagaagaccctctgccggaagaggaaccggacgtagaggaagaa
gaggaagcagatgaaacattgaaacaggctgttcggactggtccatattctatttgcagg
cgggctggcctcgataacctcgcaaaaaagtttggtctcactcccgaacattttgccgaa
aatttacgagacaattatcagcgacacgaagtagatcaggagccaacagaacctttaacc
attgctaatgaatactgtagtcaaatacttaatagttcggaagaagtactaaaagctgct
caattaatggtagctattcaattggcgcgtgaacctttggtaaggaagtgtgtccgagaa
atgtacatggaaagagcaaagatatctgtaaaacctacgaaaagaggaatcaaagagatc
gatgaaaaccatccagtctatgggatgaaatatttgaaggataaaccagtgcgagatctg
gttggagatcagttcctaaatttggttatagccgaagaagataaattaattacaataaca
ttgagtgatagcatcgaagggaatactagtaataactacgtcgacgaaatgaaacaactt
tattatcgagacgaatttagtaaaaatgtccaggattggaacgcattgagagttggaagt
gttgaaatggcacttacacgtattgttttaccgagtctaaagaaagagctaaaagcaaat
cttattgcagaagctaaagaatgcgtaatgagagcatgtggtcgtaaaatgtacaattgg
attaaagttgctccttatacctgtgaatttccagaggaagaagatgaggaatgggatacc
agtaaaggacttcgggtaatgggtttagcttatgtcccggaatactctcaagccgctttc
acttgtctaatcgcaccagatggggaatgtacagattatttgagattgccacacataatg
aaacgaaagaatagttaccgagaggacgagaaggccatgaaagaagccgacttgttagca
attcgaaattttatagcaacaaaaaagccgcatgttgtagttataggtggtgaatcgaga
gaggcaatgatgatcgcggctgatattaaagaatgtatcgcaaacctagtagaagaagaa
caattcccaaacattaagatagaaatttacgacaatgaattagctaaaatttactcgaac
agtaataaaggtatatccgaatttcgggattatccggaattattgcgacaggctatctca
ttgggcagaagaatgcaggatcccttggtggaattttctcaattatgcaccgccgacgaa
gaaattttatgtttaaagtatcacaacttgcaagatcaattgccgaaagatgaacttttg
gataatttatatttagaattcgtgaatcgcgtaaacgaagttggcgttgatgtgaataag
gcggtacaacaagcttattgcgggaatttagttcaatttgtgtgtggtttggggccgaga
aaaggacaggcattgatcaaaatgttgaaacaaaccaatcaaaggttggaaaatagaact
cagcttgtaacttcttgtcacatgggacctaaagtttttattaactgtgcgggttttatt
aagatagatacaaacagtttaggagacagcaccgaagcatatgtcgaagtccttgatggg
tctcgagtacatcccgaaacgtatgaatgggcgagaaaaatggcagtcgacgctttagaa
tacgacgacgaagatgctaatccagccggagcactggaagagattctcgaatctcctgaa
agactaaaagatcttgatttggatgcttttgcagaagaacttgaaagacaaggttttggc
aataaatgtgtcactttatacgatatcagagcagaattaaattgcagatataaagattta
cgtgtaccatatcagtcactgagcgcggaaaggttgttcgatattctaacgaaggaaacc
ccggaaacattttacgtagggaaattagttttggccacagtaataggaataagccataga
aaaccgcaaggtgatcagttggatcaagccaatcccgtaagaaacgacgaaactggattg
tggcaatgtccattctgtttgaaaaatgattttccggaattatccgaagtatggaatcat
tttgacgccggagcttgccccggcaaagctactggcgtgagattaagattagataatgga
atatctggttatattcatataaaaaatttatctgacagacacgttgcgaatcctgaagaa
agagtaagcataggacaaataatacattgtcggataataaagattgaagtggagcgattc
agcgtcgaatgtacaagtaaaagtagcgacctcgcggataaaaatcacgaatggagacca
caaagagatccgttttatgacacagaagcagaacaaagagatgcaaaagtcgaagaagat
gccaagaaagcgaagcaacggcagacatatgtgaaacgcgtaatcgtacatccttctttt
cacaacatcagttttgcagaagctgaaaagttaatgcaaactatgaagcaaggggaagca
atagttagaccaagcagtaaaggtgctgaccatttaactgtcacatggaaagttactgat
gagatttatcagcatatcgatgttagagaggagggaaaagaaaatgccttttctcttggt
caaagcttatggattggaaacgaagaattcgaggatttggatgaaattattgcgagacat
gttaatcctatggctgcatatgcttcggaattattggactttaaatattataaacaagct
gtagaaggcattaaggataaagcggaagagatattaaaagaacaaaagaaggaaaatcct
ggaggaattccgtatataatatctgctgcaaagaattatcctggaaagtttttactatct
tatcttccgcgaactcgatgtcgtcacgaatatgtaacagtatcaccagaaggatttagg
ttcagagggcaaatgtttggtagagtgaacgacttgttccgatggttcaaagaacatttc
cgtgatccggtacctggacaatctactcctagtactccacgtggagcaatgacatctaga
acaccttatcatacaacgccaggagcagtgagtggaatgaatcaagaagccatacaaaga
gtggcgcagaatcttccgcatcatatgttacattctttatcgcaagtggcgaatcaaact
cctcatcattatccaccacacacaccaggaactgcgaatgccactggttatggtggagtt
catacttatcctaatactccgtacacaccttcgggacaaacaccttttatgacaccatat
caaacaccacatcatactccacatcatcatagtcaaccaactccaagatatggacaacaa
acacccaatcatcagcaaggtcctttcattcatccacctccaccttcgggtataacttct
acaggacatcacaggtcaacaccatcgcatagacctacgcctccaatgtcaacatcaggt
gatcctatggattggaaaaaagcagcggaagcatgggcacggttaaaaagtggaccacgt
gtgtctaccactactccaagatatgaagaatctagaagaactccacgaaattacgaagaa
tcggttggaagaacgacaccacgaaatagaacttcgaatcggacaccttcttataaatct
ccccgaggtacaccacacactaattcaagtcctcgaagtatgtctctaagtggagatggt
actcctttatatgatgaaagttaa
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integrated database retrieval system
