Bombus pascuorum (common carder bee): 132907655
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Entry
132907655 CDS
T09597
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
bpas
Bombus pascuorum (common carder bee)
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpas03021
]
132907655
03036 Chromosome and associated proteins [BR:
bpas03036
]
132907655
Transcription machinery [BR:
bpas03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
132907655
Chromosome and associated proteins [BR:
bpas03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
132907655
SLIK complex
132907655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CDH1_2_SANT_HL1
HTH_Hrp3
CHD1-like_C
Helicase_C
Chromo
ResIII
HDA2-3
DEAD
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
132907655
NCBI-ProteinID:
XP_060816927
LinkDB
All DBs
Position
6:8932574..8944986
Genome browser
AA seq
1796 aa
AA seq
DB search
MQKTLEFESGKESGSDSENESKSGSSSSESNTGSGSGSESDSSSSSGSGSGSGSDSDKSE
KSDTPAQSDSFQSKSSNHSTETKVRLKNESSREWDENPDIYGIRRSSRSRKEPERLATQR
ESDSDSRKKFKKKGSHNSWNSDSSDSESDDIESRRPPPSKSLNRRAAQKAKEKARTRKKR
ISESSENSSFDSDDNRRQVTRRTGTAISYKEESEERTDSEDLVEIEEGSTANVEPDNAET
IERILGQRVGKKGVTGNVTTIYAVEENGNPNPEDLSNEETELQYSIKWKGWSHIHNTWES
EESLKAQKVKGLKKLDNFIKREREIKQWRDYAGPEDIDYFECQLELQQDLLKSYNNVERI
IAEYNKPDSDHPDYYCKWESLPYAEATWEDGILIVKKWPEKIKEFREREESKRTPSKHCK
VLKSRPKFHQLKGQPDYMGKGRDLTLRDYQMDGLNWMIHSWCKENSVILADEMGLGKTIQ
TICFLYYLFHTHQLHGPFLLVVPLSTMTSWQREMSQWAPDMNFVTYLGDVTSRNVIREYE
WCYSSKRLKFNAILTTYEIVLKDKAFLGALNWAVLLVDEAHRLKNDDSLLYKALAEFHTN
HRLLITGTPLQNSLKELWALLHFIMPTKFSSWEEFEKEHDNAAQKGYSKLHKQLEPFILR
RVKKDVEKSLPAKVEQILRVEMTSLQKQYYKWILTKNYNALRKGVKGSTMTFLNIVIELK
KCCNHAFLTKPTESERKDNNEDYLQQLIRGSGKLVLLDKLLVRLRETGHRVLIFSQMVRM
LDILGEYLQKRHFPFQRLDGSIKGELRKQALDHFNAEGSQDFCFLLSTRAGGLGINLATA
DTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTKNSVEEEIVERAKQKMVLDHLV
IQRMDTTGRTVLDKKSAGTNNNPFNKEDLNAILKFGAEDLFKDEEDGDEEPTCDIDEILR
RAETRDEGPSTVGDELLSAFKVASFAAFEEESEPVNQPNDNDDESKDWAEIIPENFRKKV
EEEEKSKEMEDLYLPPRSRKTLQQINQSGEGKGRKRKKLSADDSEEGEDSGSDAEGSDDE
RPKKRGRPRVTPRENIKSFTDAEIRRFVKSYKKFPAPLKRLDDIAADAELQEKPMSELRF
LGDQLKSRCEACLSEFESTAKENKGDEEGKGPGRKRGRGPTFKIGGVMVNAKSFSAAVKE
LEPLEQALPSDSEQRSNWHIDIKLKPANLDCDWSSEDDSRLLRGIYQHGMGSWEAIKMDN
NLKLGDKLLPNGSKLQFKKINTRAEYLLKVLKKQIDSKLGVTKARKPRKPKETKTAITKE
IIEENDSSGEESNKSKSKAEKPSTKKEEEVVVKKETKEEVEEIVEEKKKEKKTKKEKKEN
KKAKKAKQTAGPMHFTANNEPRALDVLGDLDPSIFNECKEKMRPVKKALKALDRPDQSLS
EAEQVAHTRQCLVQIGNQINTCLEEYRDPEQIKEWRSNLWYFVSKFTEFDAKKLYKLYKH
ATKKGGESNTSATSSPEKKEEPSNVKKHSEKHIDKQLESIKESRSQKRKLEDMEENSNNS
STQNKKHLSIISAVNSISNTSAVTIGATTITPITSTPNSTSGTTNSVDTPRHKEKESKHK
DMKRDRERDRDRDRVHGDRNMDRMSGSKDERIRRDSGSYSISGHYSGSREDDHWLSRDGR
DMRDGRFGDHKRDRFDSYGRMSSGYHRDRDRDRDRNIHMNDKRSDYYRYPSGPPSYGYGP
GGYGGGGGGGYPPSDIPPSHFRGRGYSGDNYPSEWRPNKDYRRDYDRRPPPPNANS
NT seq
5391 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaacgttagagtttgagtctggtaaagaatctggatctgattctgaaaatgaa
agtaaaagtggtagctcttcttcagaaagcaatacaggatctggttctggatcagaaagt
gactctagctcctcaagcggttccgggtctggatcaggttctgattctgataaatcagag
aagtcggatacacctgcacaaagtgatagctttcagagcaaaagttcaaatcacagcaca
gaaacaaaagttaggcttaagaatgagtctagtcgcgagtgggatgagaatcctgacatt
tatggaatcagaagatctagccgttctaggaaagagcctgaaaggcttgctacacaacgt
gaaagcgatagcgatagtcgcaagaaatttaagaaaaagggttcacataattcatggaac
tcagacagttccgattctgaatctgatgatattgaaagcagaagaccaccgcctagtaaa
tcgttgaataggcgcgcggcacaaaaagccaaagaaaaggcaaggacgcggaagaaaaga
atttcagaatcatctgaaaattcttcttttgatagtgatgataacaggagacaagttaca
agaagaactgggactgctattagttacaaagaggaaagtgaagagagaactgatagcgaa
gatcttgtagaaattgaagaaggtagtactgcaaatgtagaaccagataatgcagaaaca
attgaacggattttgggacaaagagttggtaaaaaaggagttacaggaaatgttacaaca
atttatgctgtggaagagaatggcaatccaaatccagaagatttgtctaatgaagaaact
gaattgcaatattcaataaaatggaagggatggtctcatatacataatacatgggaatca
gaagagtcattgaaggcacaaaaagtaaaaggattaaaaaaattagataattttattaaa
cgagaacgggaaatcaaacagtggagggattatgctggacccgaagatatagattacttt
gaatgccaattagaacttcaacaagatctcctaaaaagttataataatgttgaaagaatt
attgctgaatataacaaacctgattcagatcatccagattattattgtaaatgggaaagt
ttaccttatgctgaggctacatgggaagatggaatattgattgttaaaaaatggccagaa
aaaataaaagaatttcgtgaaagagaagagtcaaagagaacaccgagcaaacattgtaaa
gtccttaaatccagacccaaattccaccaattaaaaggacaaccagactatatggggaaa
ggtagagatttgactcttagagactatcaaatggatggattaaactggatgatccattct
tggtgcaaagagaatagtgttattttagcagacgaaatgggtcttggtaaaactatacaa
acaatatgcttcctgtattatttattccacacacatcagcttcatgggccatttttatta
gtggtgcccctttcgactatgacttcctggcaaagagaaatgtcacaatgggcaccagat
atgaattttgttacatatctgggtgacgttacttcccgtaatgttattagagagtatgag
tggtgttatagctcaaagagattaaaatttaacgccatactcacgacatatgaaatagta
cttaaggataaggcgtttctgggtgccttaaattgggccgtgttgttagtagatgaagct
catcgattaaagaacgatgattcgctcttgtataaagctctcgctgaatttcatacgaat
caccggctcttaataactggtactccattacaaaacagcttaaaagaattatgggcctta
ctacacttcataatgcctaccaaatttagttcatgggaagaatttgaaaaagagcatgat
aatgcagctcaaaaaggatattccaaattacataaacaattagaaccatttattttgcga
cgtgttaagaaagatgtagaaaaatctctacctgctaaagttgaacaaatattacgagta
gaaatgacatctttgcagaaacaatattataaatggatattaaccaaaaattacaatgca
ttacggaaaggtgttaaaggttctacaatgactttcttaaatattgttattgaattaaag
aaatgctgtaaccacgcttttcttacaaaacctactgaaagtgaaagaaaagacaacaat
gaagattatttacagcaactaattcgcggttctggaaaattagttcttcttgataaatta
ttagtgagattacgagaaacaggtcatagagtcttaatatttagtcaaatggtcaggatg
ttagatattcttggggaatatctacaaaaaagacattttccattccaaagattagatgga
agtataaaaggagaactacgaaaacaagcattagatcattttaatgccgagggatcgcaa
gatttttgctttttattatcaacaagagcaggtggtcttggtatcaaccttgctaccgct
gatactgtcattatttttgattcagattggaatccacaaaatgatttacaagcacaagct
agagcacatcgtattggacaaaaaaatcaggtaaatatttaccgcttagtaacaaaaaat
tctgtagaagaggaaatagtagaaagagcaaagcaaaaaatggttctggatcatcttgta
attcaacggatggatacaactggtcgaacagtattagataaaaaaagtgcagggaccaat
aacaatccatttaataaagaagatctaaatgctattttaaaatttggagctgaagattta
tttaaagatgaagaggacggagatgaagaacctacttgcgatattgatgaaattctgagg
agagcagaaacgagagatgaaggaccttcaacagttggagatgaactgttatcagcattt
aaagttgctagttttgctgcattcgaagaagaatccgaaccagttaatcaacctaatgat
aatgatgatgagagtaaagattgggccgaaattattcctgaaaatttcagaaaaaaagtt
gaagaagaagaaaaatcaaaagaaatggaagatctatacttacctccaagaagtcgaaaa
acattgcagcaaattaatcaaagtggagaaggaaaaggaagaaaacggaagaaactttct
gccgatgatagtgaagaaggagaggattctggaagtgatgctgaaggtagtgatgatgag
cgtcctaaaaaaagaggtagaccaagggttacgccacgagaaaacattaaaagtttcact
gatgcagagatacgaaggtttgttaaaagctataagaaattccctgcaccattgaaacga
ttagatgatattgcggcagatgcagaattgcaagaaaagccaatgtcagaattacgcttc
ttaggagatcaactaaaatctagatgcgaagcttgtttatctgagtttgaaagtaccgca
aaagagaataaaggtgacgaagagggtaaaggtcctggtcgtaagagaggcagaggacct
acatttaaaattggtggagttatggtaaatgcaaaatctttctctgccgcggtaaaggaa
ttagagcctctagaacaagctttaccatcggattcggaacaacgatctaattggcatatt
gatatcaaattgaaaccggcaaatttggattgtgattggagctctgaagatgattctagg
cttttaagaggtatataccaacatggcatgggttcatgggaagccataaaaatggataat
aatttgaaactgggtgataaacttctcccaaatggtagcaaacttcaatttaaaaaaata
aacactcgagccgaatatctactaaaagtactcaaaaaacaaattgactccaaattagga
gtgactaaagcaagaaaaccaagaaaaccaaaagaaacaaaaactgcaattacaaaagaa
attatagaggaaaatgatagttcaggagaagaaagtaataagtctaaatccaaagccgaa
aagccatccacaaagaaagaagaagaggttgttgtaaagaaagaaactaaagaagaagta
gaagagatagttgaagaaaagaaaaaggagaaaaaaactaaaaaggagaaaaaagaaaat
aaaaaagctaagaaagcaaaacaaacagcgggacctatgcattttactgctaataatgaa
ccaagagctcttgatgttcttggcgatttggatccttctatatttaacgagtgcaaagaa
aagatgagaccagtaaaaaaggcgcttaaggctttggatagaccagaccagtctttaagt
gaagcggagcaagtcgctcacacgagacagtgtcttgtacaaattggaaaccaaattaac
acttgtctagaagaatatagagatcctgaacaaatcaaagaatggagaagtaatttatgg
tattttgtatctaaatttacagaattcgatgcgaagaaactttataaattgtataaacat
gcgacaaaaaaaggaggtgaaagtaatacaagtgctacgtctagtccagaaaagaaagaa
gaaccaagtaatgtaaagaagcactccgaaaaacatatcgataaacaattagaaagtatt
aaagaaagtagatcacaaaaacgaaaactcgaagatatggaagaaaattcaaataatagc
agcacacagaataagaaacatctctcgattatatctgctgtaaacagtatcagcaataca
tctgcagttactattggcgctactaccattactcccattacatcgactccaaattctact
tcaggtaccactaatagtgtagacacgccgcgacacaaagaaaaagaatcaaaacataaa
gacatgaaaagagatcgagaacgtgatagggatagggatagagtacatggtgatagaaat
atggacaggatgagtggaagtaaagatgagagaattaggagagatagcggcagttatagt
ataagtggacactatagtggaagcagagaggatgaccattggttatcccgtgacggaaga
gatatgcgagatggaagatttggggatcataaacgtgaccggtttgattcttatggacgg
atgtctagtggatatcatcgtgacagagatcgagatcgcgatcgtaatatccatatgaat
gacaaacggagtgattattatagatatccatcaggaccgcccagttatggatacggccca
ggaggatatggcggcggaggcggcggtggttatcctccatctgatattcctccgagccat
tttagaggacgaggttattctggagataattatcccagcgaatggcgaccgaacaaggat
tatagacgtgactacgatagaagaccacctccaccaaatgctaactcctag
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