Bombus pascuorum (common carder bee): 132907882
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Entry
132907882 CDS
T09597
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
bpas
Bombus pascuorum (common carder bee)
Pathway
bpas03022
Basal transcription factors
bpas03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
132907882
09124 Replication and repair
03420 Nucleotide excision repair
132907882
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpas03021
]
132907882
03400 DNA repair and recombination proteins [BR:
bpas03400
]
132907882
Transcription machinery [BR:
bpas03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
132907882
DNA repair and recombination proteins [BR:
bpas03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
132907882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
Motif
Other DBs
NCBI-GeneID:
132907882
NCBI-ProteinID:
XP_060817326
LinkDB
All DBs
Position
6:15876908..15881504
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AA seq
561 aa
AA seq
DB search
MTTSSEDVLMQVGQVRYKKGDGTLYVMNERIAWMLDNRDTVSVSHKYADIKLQKISPEGK
SKIQLQVVLHDGSSSIFHFVNRNGQEAQIKDRDDVKELLQQLLPKFKRKVNKELEEKNRM
LQENPVLLQLYRDLVITQVISSEEFWSQHAAEYTQAKKSQRQEIGVNSAFLADIKPQTDG
CNGLKYNLTVDIIECIFKTYPAVKRKHQENVPHKMSESDFWTKFFQSHYFHRDRINAGTK
DLFTECAKIDDQELKKDIQSGIDDPLVDITSFEDQTLDDNYGNGPSKSDKVSGNIVHQSM
IKRFNQHSIMVLKASTAKQSTQSIQPQLNGSTPSASKTTTLSNQLDEQPKTKKLRIQEKL
IYDDLDTTHDINTNNSAPLNLNHIDRYLHGPVPGYGNTEPTSEELLMTLNQLRKEVNGWL
TGNSIPRQLATSLVSPAAAVSALGELTPGGSLMKGFREESLGQLIPKDLEKELRNVYVCT
CELLRHFWRSFPPTTPQLEEKAIRMHEALHRFHSAKLKPFEDRVQRDFSAVSQHLTSHLN
QLLNTAYRKFAVWQQRKMQMR
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgactacatcatcggaagatgttctaatgcaagtaggacaagttcgttataaaaaagga
gatggtactttatatgtcatgaatgaaagaatagcctggatgcttgataacagagacact
gtatcagtcagccacaaatatgctgacattaagttacaaaagatatcaccagaaggaaaa
tcaaaaatacaattacaagttgtattacatgatggttcatcatctatatttcattttgta
aacagaaatgggcaagaggcacaaattaaagatcgtgatgatgtaaaagaattacttcag
caattattaccaaaatttaaaagaaaagtaaataaagaattggaagaaaaaaatagaatg
cttcaagaaaatcctgtactgcttcagttatacagagatttggttattacccaagttatt
tcatctgaagaattttggtcacaacatgctgcagaatatacccaagctaaaaaaagtcaa
agacaagaaataggagtaaatagtgcttttctggctgatataaaaccacaaactgatggt
tgtaatggattgaaatataatttaactgttgatattatagaatgtatatttaagacttat
ccagcagtaaaaagaaaacatcaagaaaatgtgcctcataaaatgtcagaatccgatttt
tggacaaaattctttcagtcacattattttcatcgagatcgtatcaatgcagggaccaag
gatctttttaccgaatgtgccaaaatagatgatcaagaacttaaaaaagatattcaatcg
ggtattgatgatccattggtggatataacttcttttgaggatcaaactctagatgataat
tatgggaatggacctagtaaatctgacaaagtttcaggaaatattgtacatcaaagtatg
attaagagatttaatcaacacagtatcatggttttgaaggccagcactgccaagcaatct
acacaatccattcaaccacaattaaatggatcaacgccatcagcaagtaaaactacaaca
ctgtctaatcagttagatgaacaaccaaagactaagaaacttagaatacaagaaaaatta
atttatgatgatcttgataccactcatgatattaatacaaataatagtgcaccattaaat
ttgaatcatatagacaggtatttacatggtccagtgccaggatatggtaatacggaaccg
acgtctgaagaacttcttatgacattaaatcaattaagaaaggaagtaaatggttggctg
acaggaaatagtataccaaggcaattagcaacatcattagttagtccagctgcagcagtc
tctgccttaggagagttaactccaggtggctctttaatgaaaggcttcagagaagaaagt
cttggacaattaataccaaaggatttagaaaaagaactacgtaatgtatatgtgtgtaca
tgtgaacttttaaggcatttttggcgaagtttcccacctactactccacagcttgaagaa
aaagctattagaatgcacgaagcattacatagatttcattctgctaaacttaagcctttt
gaagatcgtgttcaacgagatttttctgctgttagtcaacatttaacaagtcatttaaat
caactattaaatacagcatatagaaaattcgcagtttggcaacaacgtaagatgcaaatg
aggtag
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