Bombus pascuorum (common carder bee): 132908194
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Entry
132908194 CDS
T09597
Name
(RefSeq) general transcription factor IIH subunit 4 isoform X1
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
bpas
Bombus pascuorum (common carder bee)
Pathway
bpas03022
Basal transcription factors
bpas03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
132908194
09124 Replication and repair
03420 Nucleotide excision repair
132908194
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpas03021
]
132908194
03400 DNA repair and recombination proteins [BR:
bpas03400
]
132908194
Transcription machinery [BR:
bpas03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
132908194
DNA repair and recombination proteins [BR:
bpas03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
132908194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
ACP_syn_III_C
Motif
Other DBs
NCBI-GeneID:
132908194
NCBI-ProteinID:
XP_060817957
LinkDB
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Position
6:complement(5725506..5728281)
Genome browser
AA seq
467 aa
AA seq
DB search
MSNTISGKNLLRPAGLQCKNLQEYLKSRPPEVLNKLYHNPPICLAVFRELPVIAKHYVMR
LLFVEQPVPQAVIASWCSKLHFEEHQKVVLILNELNVWKEASIPGGLPGWILNTTFKKNL
KIVLLGGGKPWTMSNQLETDSKPRDVAFLDSYALERWECVLHYMVGSQQQEGISADAVRI
LLHAGLMKRDEADGSPVITQAGFQFLLLETASQVWYFILQYLDTIEARGLDLVECLTFLF
QLNFSTLGKDYSTEGMSEGLSTFLQHLREFGLVYQRKRKAGRFYPTRLALNIATGQNKPL
SRDPEKEGYIVVETNYRVYAYTNSNLQVALLGLFCEMLYRFPNLVVSILTRDSVRQALKS
GITAAQIVGYLQQHAHGKMIEAGPPVLPPTIVDQIKLWENERNRFIFSEGVLYSQFLSQT
DFEVLRDHALSTGVLIWQNERKRTIVVTKAGHDDVKKFWKRYSKGSS
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatacaataagtggaaaaaacttgttacgaccagctggattgcaatgtaaaaat
cttcaagaatatttaaaatcacgtccaccagaagtattaaacaaattatatcataatcct
ccaatttgcttggctgtgtttcgggaattgccagtaatagcaaaacattatgttatgcga
ttattatttgttgaacaacctgtacctcaagcagttattgcctcgtggtgttctaaactt
cattttgaggaacatcaaaaagtagttttgatactaaatgaacttaatgtatggaaagaa
gcatcaataccaggtggactacctggatggattctaaatactacattcaagaaaaactta
aaaatcgttcttttgggaggtggaaaaccatggacaatgtcaaaccaattagaaactgat
agtaaacctagagatgttgcatttttagattcatatgcactagaaaggtgggaatgtgtt
ttacattacatggttggttcacaacagcaagaaggtatatctgctgatgctgttagaatt
cttttacatgctggcttgatgaagcgagatgaagctgatggaagtccagttattacacaa
gcaggttttcaatttttgttattggaaactgcatcgcaggtgtggtattttattttacaa
tacctagatacaatagaagcaagaggacttgatctagttgaatgtcttacttttttattt
caattaaatttctcgacacttggtaaagattacagtactgaaggaatgtccgaaggtctg
tcaacatttttacaacatttaagagaatttggtttggtttatcaaagaaaacgaaaagct
ggaagattttatcccacaagattagcattaaatattgcaactggacaaaataaaccattg
tctagagatccagagaaggagggttacattgttgttgaaacaaattacagagtatatgct
tatacaaactcgaatttacaagtagctttacttggattattttgtgagatgttatatagg
tttccaaatctggttgtgtcaatattaacaagagattctgtacgtcaagctctgaaaagt
ggaattactgctgcccaaattgtaggttatttgcagcaacatgctcatggtaaaatgata
gaagcaggtcctccagttttaccaccaactatagtagatcaaattaaattatgggaaaat
gaaagaaatagattcatatttagtgaaggagttttatatagtcagtttctttctcaaact
gattttgaagtgcttagagatcatgctctttctactggagtactaatttggcaaaacgaa
aggaaacgaactatagtagttacgaaagcaggtcatgacgacgtaaaaaaattttggaaa
cgatattccaaaggttccagttag
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