Bombus pascuorum (common carder bee): 132908356
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Entry
132908356 CDS
T09597
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
bpas
Bombus pascuorum (common carder bee)
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpas03021
]
132908356
Transcription machinery [BR:
bpas03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
132908356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_14
TPR_19
TPR_8
TPR_16
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_11
TPR_10
TPR_6
TPR_Slam
TPR_7
ARM_TT21_4th
TPR_MalT
PknG_TPR
ANAPC3
TPR_21
Peptidase_S41_N
Motif
Other DBs
NCBI-GeneID:
132908356
NCBI-ProteinID:
XP_060818279
LinkDB
All DBs
Position
6:11414430..11420621
Genome browser
AA seq
1292 aa
AA seq
DB search
MMAGSIEIPLRDTDEVIELYLDQLPEGDEVLGILRQEHAQLNIWVNLALEYYKQHKIEDF
IKILESSRIDANIDYRDYEKDQMRALDMLAAYYVQEANREKNKDKKRDLFTKATLLYTTA
DKIIMYDQNHLLGRAYFCLLEGDKMDQADAQFNFVLNQSPNNIPSLLGKACIAFNKKDYR
GALAFYKKALRTNPNCPAAVRLGMGHCFMKLNNQEKARLAFERALQLDGQCVGALVGLSV
LKLNQQQPESIRTGVQMLSKAYTIDSTNPMVLNHLANHFFFKKDYNKVQHLALHAFHNTE
NEAMRAESCYQLARAFHVQGDYDQAFQYYYQATQFAPPVFVLPHFGLGQMYIYRGDAENA
AQCFEKVLKAQPGNYETMKILGSLYANSSSQSKRDIAKNHLRKVTEQFPDDVEAWIELAQ
ILEQSDLNAALNAYGTATRILKEKVQADIPPEILNNVGALHYRLGNLEEARKNLEESLAR
SKADALHDSVYYNSIAVTTTYNLARLNEALCVFDKAEKLYKAILKKHPNYVDCYLRLGCM
ARDKGQIYEASDWFKDALSINNEHPDAWSLLGNLHLGKMQWGPGQKKFERILKNPATSTD
AYSLIALGNIWLQTLHQSGKDKDREKRHQDRALAMYKQVLRNDPKNIWAANGIGAVLAHK
GCVNEARDIFAQVREATAEFCDVWLNIAHIYVEQKQFVSAIQMYENCLRKFYKYHHVEVL
QYLGRAYFKAGKLKEAKLTLLKARRVAPQDTVLLYNIALVLQRLATQILKDEKSTLTTVL
QAVHELGLSHKYFQYLSTHGDKMGQLAEAEARRCQDLLSQAQYHVARARRLDEEEKMLRR
KQEEERQAFKMRQTEEQRKLEEMRRQKEEEMLQKRQEYVEKTKNALVFGEMPSEKPGRKG
KRVRTDQYVSDNSGGSGREEGRDEAVREKKRKKKASGERKEKRGKRKGKRKKEVASGGSG
SESDRFKPKRTRKGIIKKDRAFRKGTAETTKGKMPLSKETISTSDSDSDSGGLKIASGGE
SGNEGRGRGARRILSDSEGSRASRSRSRSRSKSRSRSRSSSRSRSQSGSRSRSRSPSRSR
SRSGLQSRSASRSRSRSRSGSKSRSQSRSKSPSRSRSVSAKSGSRSRSRSGSRKSQSRSR
SRSGSRKSGSQPRSRSGSAASARSRSGSAGSARSRSGSARSRSGSATSARSRSRSPSGSR
KAASRSRSRSRSGSRSGSQSEGRVSRSRSRSKSKSVSRSRSRSGSRSKSGSRSRSPSGSA
RSATPESRKSVSGSDVGSRHSSTDRGGGSESE
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgggatccatagagataccactccgtgatacagatgaggtaatcgagctatac
ctggatcaattaccagaaggagatgaggttcttggtattttacgtcaagaacatgcacaa
cttaatatttgggtcaatttggctcttgaatattacaaacaacacaaaattgaagatttc
attaaaatacttgaatcttctcggattgatgctaatattgattaccgtgactatgaaaaa
gatcaaatgcgtgcgttggatatgttggctgcatattatgtgcaggaagccaacagagaa
aagaataaagacaaaaagagagatctatttacaaaagctaccctattatatacaactgca
gataagattattatgtatgaccagaatcatttacttggcagagcttatttttgccttctg
gaaggggataaaatggatcaggctgatgcccaatttaattttgtactaaatcagtctcca
aataatattccttctctactgggaaaagcatgcatagcgtttaacaaaaaagattataga
ggtgcgcttgccttttataaaaaggcattgagaacaaatccaaattgtccagctgctgtg
aggttagggatgggacattgttttatgaaactaaataaccaggaaaaagcacgtttagca
tttgaaagagctttacaattagatggccaatgtgttggagcgttagttggactttcagta
ctgaaactgaatcaacaacagcctgaaagtatcagaactggtgttcaaatgttatctaaa
gcttataccattgattcgactaatcccatggtgttgaatcatttggcaaatcattttttc
ttcaaaaaggactataataaagtacagcacttagcccttcatgcatttcacaataccgag
aacgaggctatgcgtgcagagagttgctatcaattagccagagcatttcatgttcaaggt
gactatgaccaagcgtttcaatattactatcaggcaacacaatttgcgcctccagttttt
gtattaccacactttggcttaggtcaaatgtatatttatcgtggtgatgcagaaaatgca
gcacaatgtttcgaaaaagtgttaaaagctcagccaggtaattatgaaacaatgaaaatt
cttggatctctgtacgcaaactcaagttctcaatcgaaacgcgatattgctaaaaaccac
cttcgaaaagtaactgaacaatttccggatgatgttgaagcgtggattgaattggctcaa
atattggagcaaagtgaccttaatgcagccttaaatgcatatggtacggcaactaggatt
ttaaaagaaaaagtccaggcagatataccaccagaaattctaaataatgttggtgctcta
cactatagacttggaaacttagaagaagctaggaaaaatttggaggagtctttagcgcgt
tctaaagccgatgccttacacgattctgtatactataactcgattgcagttacaacgaca
tataatttggctcgtttgaacgaagctttatgtgtatttgataaagcagaaaaattatac
aaagccattttaaagaaacacccaaactatgtagattgttatttacgacttggctgtatg
gctcgagataaaggacaaatttatgaagcatctgattggtttaaggatgctttaagcata
aataacgagcacccagatgcatggtctcttttgggtaacttgcatttgggtaaaatgcag
tggggtcctggccagaagaaattcgaaagaattttgaaaaatccagcaacaagtaccgat
gcctattctttgattgctttgggtaacatttggttgcaaacattgcatcaaagtgggaaa
gataaagatcgagagaagcgacaccaagacagagcattggctatgtataagcaggttttg
cgaaacgaccctaaaaatatttgggctgcaaatggaataggagctgtactagcgcataaa
ggttgtgtaaatgaagctagagatatttttgctcaagttcgagaagcaacagcagaattt
tgcgatgtgtggttgaatattgcgcacatttatgtagagcaaaaacaattcgttagcgct
atccaaatgtatgaaaactgccttcggaagttctataaataccatcatgtcgaagttttg
caatatcttggaagagcttactttaaagctggtaaattaaaagaagcaaaattgacatta
ttaaaggcaagaagagtagctccacaggacaccgttttattatacaatattgcacttgtc
cttcaacgtctagcgacacaaattctgaaggatgagaagtccaccttaacaacagtgctt
caggcagttcacgaattgggactctcacataaatacttccaatatctatcaacgcatgga
gataaaatgggacaacttgcggaagcagaagcaaggaggtgccaagatcttttatcgcaa
gcacaatatcatgttgccagagctagacgattggatgaggaagaaaaaatgcttaggagg
aaacaagaagaagaaaggcaagcatttaaaatgcgacaaacggaagaacaacggaaactt
gaagaaatgcgacgccaaaaagaagaggaaatgttacagaaacgtcaagagtacgttgaa
aagacaaagaacgctttagtattcggcgaaatgccttcagaaaaacctggaaggaaagga
aaaagagtacgcactgatcaatatgttagtgacaacagtggtggttctggaagagaggaa
ggtcgggatgaagctgttagagaaaagaaacgtaaaaagaaagcaagtggtgaacgtaaa
gaaaaaaggggcaagcgtaaaggaaagcgcaagaaagaagtggcaagtggaggaagtggt
tcagaaagtgatcgattcaagcccaaacgtacaagaaaagggattattaagaaagacaga
gcatttcggaaaggtacagctgaaactacaaaaggaaagatgcctttatcgaaggaaact
atatcgacgagcgattctgatagcgattcaggaggccttaaaattgccagcgggggtgaa
agcggtaacgaaggtcgcggacgaggtgctagacgaattctatctgactcagaaggatcc
cgtgcatcgagatctaggtctcgttccagatcgaaatctagaagccgttctagaagtagt
tcacgatcgcgatcacaatcgggatcacgatcacgatcacgatcaccatcacgatcacga
tcacgatcaggacttcaatcccgatccgcatctcgttcacggtctagatctcgttcaggt
tccaagtcgaggagtcaatcgcggtcgaaaagtccgtcgagatcaagatccgtttcagcg
aaaagtggttcacgctcgagatccagatcagggtcaaggaagagtcaatcgcgatcaaga
tcgcgtagtggttcgaggaaaagtggatcgcaaccaagatcaaggtcgggttctgcagct
agtgcacgatcaagatcgggttctgcaggtagcgcacgatcaagatcaggctctgcacgt
tcgagatcgggatctgcaactagtgcacgatcgagatcaaggtctcctagtggttccaga
aaagcagcttcgcgatcaaggtcaaggtcaagatcaggatcaaggagtggttcacagtcg
gagggacgtgtatcgagaagtagaagccgatcaaaatctaaatctgtgtcaagatctaga
tcgcgttctggttcacggtcaaagagtggttctcgaagtcgcagccctagtggatcggca
agatctgctactccagagtcgagaaaatcagtttcgggcagtgacgttggttcccgccat
tcgagtacagatcgaggaggtggcagtgaaagcgaataa
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