Bombus pascuorum (common carder bee): 132908408
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Entry
132908408 CDS
T09597
Name
(RefSeq) RNA exonuclease 1 homolog isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
bpas
Bombus pascuorum (common carder bee)
Pathway
bpas03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
132908408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bpas03009
]
132908408
Ribosome biogenesis [BR:
bpas03009
]
Eukaryotic type
Pre-60S particles
RNases
132908408
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
Motif
Other DBs
NCBI-GeneID:
132908408
NCBI-ProteinID:
XP_060818390
LinkDB
All DBs
Position
6
Genome browser
AA seq
1230 aa
AA seq
DB search
MLPSTGYFKAINCPFYENGACDRPYCHFKHSKREDVGVTSTEATETVENHSAGKAEDSKA
TTMVTSDSGVLQQLVTEAVKKVLANRSVTDVDNKLSCQNVVSQVVEELKPTLTTGSSGTV
NNVKATMVEERTNTPAPVNMQPCVYNPTPIAELKKRHIPIVSYMPTRKNTVAVKRKSSLD
EIKPWLNMGNESAESQSVELKYKPTVIITPEARDTTQSYIPTCKSDSPSLNSCKDGSPNE
YLLKLRETYYPKSKKKREEYVPKKVKTRLKTDDGLNESALDHIETDLNMMDKVLTCSKST
SDVQSSKISPDSPIDIEPKFSDDEEEDSNDHDNIDDHDDTNKNNTAHIDFRTLEQNESYS
DIKKSDYATHLQDTYFPKIIDSTDRTINKENHNEKILTYSNTLKQETSDESSKSSQCEKG
NVPEVDLNKSTDKNVKEYKSKDKNKDKNQRDHSTSHKRYKEKHESSKRSHSSSHSKSKNK
DHLRHKSKESKEKNHDKDRGKYKHQEKDKDQDKDESKHKSKSDRKDNHRSGKRHGHSKSS
SKEHTKDKSDRSSKHLKTHRRLDDTINKKYVESKEKKNLSERFGNSLESVRLNSMNDNDE
ENDDHHSSIIGNDIDVTFSMSDSDHDVQEECLKIFQEYQVPVQSRVAEPLEVRSSALLEK
EKEQIEDVGKKRVAHPSAAVCVIRQIGVNQQARKFVNPQQKMYERWRLMRDAVAEKTISA
SSSAPKDVRRNCSKATGTASNNELKLNGNVRIRIAHVPYAKSLALEKRKVTENVGKSVEP
KAADNYKTAAQTAKSGVRIAHVPQMVPQLIRPEPLQVATQKFPLNVRQYYVNMMHDVCVL
IYTSAEDAAQRAVKEEYACHERCKALAVYKNSCMLATHRLRKEADQNSPVDNNAIVIPGS
STVSHETVLAGKAKGSWSVLKTKRAVTKFKGAALYGMLKKWIMTEQQLQDNGFPRPHPDG
QKGRAKVYVTNTRNQSVLSKVPNERICSRCGQTYMIDKRGFATRSQNCIYHWGRKFTIRG
ESKYSCCQQYGSATGCCDAKTHVWDYTDYENLRGYVRTLPKDTPVEEQGVYALDCEMCYT
TQGLELTRITVIDDDCSVVYETLVNPQNPIIDYNTRFSGITEENMKDVTTTLLDVQATLL
TMFSDKTILVGHSLESDFKALRLLHDTVVDTSVMFPHKNGYPQKRALKNLCSEYLRKIIQ
NDVGGHDSKEDAVACMELILWKAKEEAKLQ
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atgttgccttcgactggttactttaaagctataaactgtccattctatgaaaatggagcg
tgcgatagaccttactgtcatttcaagcattcgaaacgggaagatgttggagttaccagt
acggaggctacagagacagtggaaaaccattccgcgggtaaagctgaagactctaaagct
actacaatggtaacatctgattcaggcgttttacaacaattagtaacagaagctgtcaaa
aaagtcctagctaatcgaagtgtcacagatgtagataataaattgtcttgtcagaatgtt
gtttctcaggtagttgaagaattaaaaccaacattaaccactggatcatctggtacagta
aacaatgttaaggccactatggtggaagaaagaacaaatacaccagcgccagttaatatg
caaccatgcgtttataatccaacaccaattgcagaactaaagaaacgtcacataccaata
gtatcttatatgccaactaggaaaaatacagtagctgtgaaacgtaaatcttctctggat
gaaattaaaccttggttaaatatgggcaatgaatctgcagaatctcaaagtgttgaactt
aaatacaaacctactgtgataatcacacctgaagctcgggatactacgcagagttatata
cctacatgcaaatcggactcaccttcactaaattcatgtaaggatggtagtccaaatgaa
tatttacttaaactcagggagacctattatccaaagagtaaaaagaaaagagaagaatat
gtcccaaaaaaagtgaaaactcgactaaaaacggatgatggattaaacgaatctgcacta
gatcatattgaaacagatctcaatatgatggataaagtactcacatgctccaaatcaact
tctgatgtacagtctagtaaaatatctccagattctcctatagatatcgaaccaaaattt
tctgacgacgaagaagaagatagtaatgatcacgataacattgacgatcatgatgacaca
aataaaaataatactgcacacattgattttaggactttagaacaaaatgaatcttattct
gatataaaaaaatctgactatgcaacccatttacaggatacgtattttccaaagataata
gatagcactgacagaactattaacaaagaaaatcataatgaaaaaatattgacatatagc
aatactctgaaacaagaaactagtgatgagagttctaaatcctcacaatgtgaaaaagga
aatgtaccagaagtagatttgaataaaagtacggataaaaatgtaaaggaatataaaagc
aaggataagaataaagacaaaaatcaaagggatcacagtacatctcataaaaggtataaa
gagaagcatgaatcaagtaaaaggtcgcattccagttcgcatagtaaaagtaaaaataaa
gatcatttgagacacaaaagcaaagaatcaaaagagaagaatcatgataaggataggggt
aaatataaacatcaggaaaaggataaggaccaagataaagatgagagtaaacacaaatct
aagagcgatagaaaggacaatcataggtctgggaaacgtcatgggcattccaagagttct
tcgaaagagcacactaaggataaaagtgatagaagtagcaaacatttgaaaacacatcgt
aggttggatgatacaataaacaaaaaatatgtggagagtaaggaaaaaaaaaatttatcc
gagagattcggaaattctttagaaagcgttcgtctgaattctatgaatgacaatgacgaa
gagaatgatgatcatcatagtagtatcattggtaatgatattgatgtaacttttagcatg
tctgattcagaccatgacgtacaagaagagtgtttaaagatatttcaggaatatcaagta
ccagtgcaatcaagggtagcagaaccattggaagtcagatcatctgcattgctcgaaaaa
gaaaaggaacagatagaagacgttggcaagaaaagagtagcacatccttcagcagctgta
tgtgttatcaggcaaattggagttaatcaacaggcgagaaaatttgtaaatccacaacag
aaaatgtacgaaaggtggcgtctgatgcgcgatgctgtagcagaaaaaacaatttctgca
agtagtagtgctcccaaggatgtacgtcgtaattgttccaaagcgacaggtacagcgagt
aacaacgaattgaagttaaatgggaatgttcgtatcaggattgcacacgtaccgtatgct
aaatccttagccctagaaaaaagaaaggtaacagaaaatgtaggaaagtcagtggagccg
aaagctgcagataattataaaacagctgcacaaacggcaaagagtggtgtacgcattgct
catgttccacaaatggttcctcagctaattcgtcctgaaccattacaagtagctacgcag
aaatttcctttaaacgttcgtcagtattatgtgaatatgatgcatgacgtatgtgtatta
atttacacaagtgccgaggacgcagcacaacgtgcagttaaagaagaatacgcttgtcac
gaaagatgcaaagcactagctgtttacaaaaattcctgcatgcttgctacgcatagattg
agaaaagaggctgatcaaaattcacctgtggataataatgcaatagtaattccaggtagt
agtacagtttctcatgaaacagtgctggctgggaaagctaaaggttcgtggagtgttctt
aaaacaaaaagagccgttacgaaatttaaaggagcagctttatatggtatgctaaaaaaa
tggataatgacggagcaacaacttcaagataacgggtttcctcgtccacatccagatggt
cagaagggtcgtgccaaagtctatgtaactaacacacgaaatcaaagtgttctatcaaaa
gtgcctaacgaaagaatttgtagtcggtgtggtcaaacttatatgatcgataaacgagga
tttgctacgcgatcacagaattgtatatatcattggggcaggaagttcacaatcagaggt
gaaagcaaatacagttgctgtcaacaatatggttctgcaactggttgttgtgacgcgaag
acgcacgtttgggattatacagactatgaaaaccttcgtggttacgtgagaactttaccg
aaagatacgccggtagaggaacaaggggtatatgcactcgattgtgaaatgtgttataca
actcaaggattggaactaaccaggataacagtcattgatgatgattgcagtgtagtatat
gagacgttagtgaatccccaaaatcctataatcgattataatacaaggttttctgggatt
acagaggaaaatatgaaggatgtgacaacaacgttattagatgtccaagcaacattattg
acaatgttttcagataaaactatattagtgggtcatagtttagaaagcgatttcaaagct
ttaaggcttttgcacgatactgtcgttgatacaagcgtgatgtttccacacaagaatggc
tatccacaaaagagagcattgaagaacctttgttccgaatatttaaggaagatcattcaa
aatgacgttggtggacacgacagcaaagaggatgctgtcgcttgtatggagttaattctt
tggaaagcaaaggaagaagcaaaattacagtaa
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