Bombus pascuorum (common carder bee): 132908975
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Entry
132908975 CDS
T09597
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
bpas
Bombus pascuorum (common carder bee)
Pathway
bpas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132908975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpas03019
]
132908975
Messenger RNA biogenesis [BR:
bpas03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
132908975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_16
TPR_1
TPR_2
TPR_8
TPR_14
TPR_19
TPR_17
TPR_12
TPR_11
TPR_6
ANAPC3
ChAPs
TPR_21
BTAD
PknG_TPR
TPR_15
TPR_10
Motif
Other DBs
NCBI-GeneID:
132908975
NCBI-ProteinID:
XP_060819460
EnsemblRapid:
ENSBPAG00000011668
LinkDB
All DBs
Position
7:188760..206839
Genome browser
AA seq
1301 aa
AA seq
DB search
MSNDIKVALKAARETFKEKKYIDVIKKCNKILLRDQNNYNALMLLAAAMKQIDEYKSQVP
LILQKGTKIQADNPLAWYGLVSYYEKNLDNNECYNQLLLAYCKLLEIESDIKFTNIMSKI
SKLFTQLTDVELVIQCIEHLIELRKNLDDNKIKLIDKTLGWLLLDNFYDLNKYQNLLESI
FKSTINDHDATDQKRFYTKYLKILYDKDELIDLVKEAINMHQRFPQDILPLEYICLAYLE
RNILDENFTDVDITQFYESCLKLNKECEIAKIAKALDLAKSGNLIIARDILKDILVSTPR
LVCCWMALNQISMKLYCWEDAEVAAKRVLDTKKYIIKNKLECKMKETLVEAMSLTNDKSK
WENAFRMCGQIHPSARLDLIRARLSILLHRPDVEILLNNLESKDETRIHTNILRALYLKQ
NKQYDEAVNILDSAVRKPGLSQTSQAWLLLGTIYWEMAEYNYSLMAFLNGIKADRFNWKC
LVYLGQYYRDYGNDMERSRRCYQTALQINPNSEEAGIGLSTAYRLLKNQDANIKLLQMLT
AQDSGPGWAWLQLGLQYLDQGNAEQAIKAFQHVIRADPSDSHCWESLADAYFIRGAHTSA
LKSYQRVLELCPQLLYPMIQLAYIKLIIGQYNEAKKDFEQILINKSCYIPALKGLAETCL
ALAKDYTAKQLLGRANDYLQQAMDSLTVAIKERKDISCLWKLLGDVCYRVAMLPDKYSHL
KASSILIKYENVEDIILLKRIDMFSLSARCYCCALSLSPESVFLWYDLALCYLMQLQHDP
SINHKKHASKCLAAAKHAVKLCPSTWKHWNLLGIICMSPYIKNYALAQHAFIMAIDNELN
NAIVWSNLGTLYLYIGNLYKANEAYSRAQRADPSYINSWIGQALIAEIMNRKETVDLFRH
ARQLGYHSQAAIGYTHWVFDMILNPNTEHGILYTNTIQSMHAISSAADVMTWYVENHPND
CYARNAYGLLLERQRLYKSAAEQFAVAVCNSTKNEKDLVSINLARVLIRMKRYNEAIKLC
QGVANTNYNSQCHLALALFKAELYEEAYNTYEKTLHSFADTEAQKSYTLCAMAAIAYSFH
RVNDAKTLLFQCIQIQPPVIIALLAATSLGILHGDINLAGLVLKELELCVPNSEYGHHVL
SLFAYYYLVANNARKAIIILSKEIFRYPGNVKYWTILLRILLETDLELFSRCAQKVLFLN
RNIITENHVHVACALSFSYFMQNIGPTSIRSMQKLLFTYPASIESWVMFIAGFLSRRAMK
KYKMNVEWFLTLINNIQQSYQPTYVMAKWLNDTKIKLEQLN
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatgatataaaagtggctcttaaagcggctcgtgaaacatttaaagaaaagaaa
tatatagatgtgattaagaaatgtaacaagatattattgagagatcaaaataattataac
gcacttatgttattggcggctgcgatgaaacaaattgatgagtataaatcacaagtgcca
ttaattctccaaaaaggtacaaaaatccaagcagacaatccattagcttggtacggttta
gtatcttactatgaaaaaaacttggacaataatgaatgttataaccaactattattagct
tactgtaagcttttggaaatagaaagcgacattaagttcacaaatattatgagtaaaatc
tcaaagttgtttacacaacttacggatgttgagcttgtaattcaatgtatagaacattta
attgaattacggaagaatttggatgataacaaaattaagctcattgataaaacgcttgga
tggctgctattagataatttttacgatctaaataaatatcaaaatttattagaaagtatt
tttaaatctacgattaacgatcatgatgcaactgatcaaaaaaggttttatacaaaatat
ttaaaaatcttatatgacaaagatgaattaattgatttggtaaaagaagctatcaatatg
catcagcgatttccgcaagatatattaccgttagaatatatatgtcttgcttacttggaa
cgaaatatcttggacgaaaattttactgacgtcgatataacacaattttatgaaagttgc
ctaaaattgaacaaagagtgtgaaatagctaaaattgctaaagcactagatttagcaaaa
tcaggaaatttgattatagcgcgagatatattgaaagatatacttgtatcaacgccgcgc
ttagtatgttgttggatggcattaaatcaaataagtatgaagctttactgttgggaagat
gcagaagttgctgccaagcgagtattagatacgaagaaatatataataaaaaataaatta
gaatgtaaaatgaaagagacattagttgaagcaatgagtttaactaatgacaaatctaaa
tgggaaaatgcattccgaatgtgtggacaaatacatccttcggcacgattggatttgatt
cgtgcacgtcttagcatattgttacatcgaccagatgtagagattctgctgaacaatttg
gaatcaaaagatgaaactagaatacataccaatattcttcgagcgttatatttaaaacaa
aataaacaatacgacgaagccgtaaatatacttgattcagccgtccgaaagccaggcttg
tctcaaacttcccaagcgtggttacttcttggtacaatttattgggaaatggcagagtat
aattacagtttgatggcttttttgaatggaataaaagccgatcgttttaattggaaatgt
ctagtttatttgggacagtactatcgtgactatggtaatgacatggaacgttctaggaga
tgttaccaaaccgcattacaaattaatccaaattctgaagaagctggtattgggttaagt
acggcgtatagacttcttaaaaatcaagatgcaaatataaaattgttacaaatgttaact
gcacaagatagcggtcctggatgggcgtggttacaactcggtttgcaataccttgatcaa
ggaaatgcggagcaagctattaaagcgtttcaacatgttattagagctgaccccagtgat
agccattgctgggaatcgctagcggatgcgtattttataagaggtgcccacacatcagca
ttaaaatcttatcagcgagtattagagttatgcccacaattactatatccaatgatacaa
ttggcatatataaaattgattattggacaatataacgaagcaaagaaagactttgaacaa
atattgataaataaatcatgttatattcctgctttaaaaggattggctgaaacctgtctg
gctttagcaaaagactatactgctaaacaacttctgggtcgtgcgaatgactatttgcaa
caagcaatggatagtttaactgtagctattaaagagcgtaaggatatatcttgtctctgg
aagttacttggcgatgtgtgttacagagttgcaatgttaccagacaaatacagtcattta
aaagcatcatctattctaataaaatatgagaatgtcgaagatattatattgcttaaacgg
atagatatgttctcgttatctgcaagatgttattgttgtgcattatctctttctccggaa
tcagtttttctgtggtatgatttagctttatgctatttaatgcaattacagcatgatcca
tcaatcaatcataaaaagcatgctagtaagtgtctagctgctgcaaaacatgctgttaaa
ctatgtccttcaacatggaaacattggaatcttctgggtattatttgtatgtcaccgtac
ataaagaactatgcattggcacaacatgctttcataatggcgattgataacgaattaaat
aatgctatagtatggtctaatttgggaactttatatctatatataggcaatttgtataaa
gcaaacgaggcttattctcgagctcagcgtgccgatccgtcatatatcaatagttggata
gggcaagctttaattgcagaaataatgaatcgaaaagaaacagtagatctatttagacat
gcaagacaattaggatatcatagtcaagctgccatagggtacactcattgggtatttgat
atgattttaaatcctaacaccgaacatggcattttatatacaaatacaatacaaagtatg
catgcaatatcttctgctgctgatgttatgacgtggtatgtagagaatcatccaaatgat
tgttatgctcgaaatgcgtatggattattattagaaaggcagagactttataagtcagct
gcagaacaatttgccgtagctgtatgtaatagtaccaaaaacgaaaaagaccttgtttct
ataaatttagcacgtgtgctaatacgaatgaaaagatataacgaagcaataaaattatgt
caaggagttgcaaataccaactataattctcaatgccatctcgcgttagccttattcaaa
gctgagctatacgaagaagcgtataatacgtatgaaaaaactctgcattccttcgcggat
accgaagcacagaaatcatatacactgtgtgcgatggctgcgatagcatattctttccac
agagtaaatgatgcaaaaactttacttttccaatgcatacaaatacagcctccagttata
atagctcttttagcggccacatcattagggatattacatggcgatatcaatttagctgga
ttagtactgaaagaattggagttatgtgtacctaattctgaatatggtcatcatgttcta
agcttatttgcatattattatttggtagcaaataatgctagaaaagccattattattctt
tctaaagaaatctttagatatcctggcaatgtaaaatattggactatattgctcaggata
ttattagaaactgacttagaactgtttagtagatgcgcacaaaaggtattgtttcttaat
agaaatattattactgaaaaccatgtacatgttgcatgtgctttatcctttagctatttc
atgcaaaatataggaccaacaagtattagatctatgcaaaagcttctatttacttaccct
gccagcattgaaagttgggtaatgttcattgcaggatttttatcaaggcgtgcaatgaaa
aaatataaaatgaacgtcgagtggttcttaacacttataaataacatacaacagtcatat
cagcccacatatgtcatggcaaaatggttaaatgacactaaaataaaattggagcagctc
aattaa
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