Bombus pascuorum (common carder bee): 132909001
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Entry
132909001 CDS
T09597
Name
(RefSeq) CCR4-NOT transcription complex subunit 6-like isoform X1
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
bpas
Bombus pascuorum (common carder bee)
Pathway
bpas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132909001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpas03019
]
132909001
Enzymes [BR:
bpas01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
132909001
Messenger RNA biogenesis [BR:
bpas03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
132909001
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
132909001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
132909001
NCBI-ProteinID:
XP_060819542
LinkDB
All DBs
Position
7:complement(1060525..1491822)
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AA seq
358 aa
AA seq
DB search
MCYNVLCDKYATRQMYGYCPSWALDWEYRKKGILDEIRHYAADIISLQEVETDQFYNFFL
PELKHDGYDGIFSPKSRAKTMAENDRKYVDGCAIFYRTAKFTLIKEHLVEFNQLAMANAE
GSDNMLNRVMPKDNIGLAALLRTKEAAWDNGLPSDPAQVQQPILVCTAHIHWDPEFCDVK
LIQTMMLSNELRSILDQAGQSFRPGHKPDSSNVQLLLCGDFNSLPDSGVIEFLTSGRVAA
DHRDFKDLAYKSCLQKISGCDKPNEFTHSFKLASAYSEDIMPYTNYTFEFKGIIDYIFYS
KQSMVPLGLLGPLSADWFKEHKVVGCPHPHVPSDHFPLLVELEMTPTVGTSNGLISRR
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgtgttacaatgtattatgcgacaagtatgcgactcgacaaatgtacggttattgtcca
agctgggcgctcgattgggagtatcggaaaaaggggatcctcgatgagattcgacattac
gccgcggatataattagcctgcaggaggtcgaaacggaccaattctacaatttcttcctg
ccggaacttaaacatgatggctacgatggcatattttctccaaaatctcgggcgaagacg
atggcagagaatgatcgtaaatacgtagatggttgcgccatattttacagaacagcgaaa
tttacattaataaaagagcatttagtcgaatttaaccaattggcaatggcaaatgcggaa
ggttctgacaacatgctaaatcgagtaatgccaaaggataatattggattggctgccctg
cttaggaccaaggaagctgcttgggacaacggccttccatctgatccagcacaagttcaa
caaccgattttagtttgcacggcccacattcattgggatccagaattttgcgacgttaaa
ttaatacagacaatgatgctcagtaatgaattacgttccattttggaccaagctggccag
tctttcagacctggtcacaagcctgattcttccaatgttcagctgttactttgcggtgac
ttcaattctctacctgactctggtgtaattgaatttcttacttcgggacgagtagcggct
gatcatcgtgactttaaagacttagcttataaatcatgcttacagaagatctctggttgc
gataaacctaatgaattcactcattcttttaaacttgcatctgcatatagtgaagatatt
atgccctacactaattatacattcgaattcaaaggtataatagattacattttctactca
aaacaaagtatggtaccattaggacttttaggtcctctaagtgcagattggtttaaagaa
cataaagtagttggttgtccacatccacacgttccatctgatcattttcctttattagta
gagcttgaaatgacaccaacagtaggaacaagcaatggattgatctcacgcaggtag
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