KEGG   Bombus pascuorum (common carder bee): 132909136
Entry
132909136         CDS       T09597                                 
Name
(RefSeq) polyadenylate-binding protein 1
  KO
K13126  polyadenylate-binding protein
Organism
bpas  Bombus pascuorum (common carder bee)
Pathway
bpas03015  mRNA surveillance pathway
bpas03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bpas00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    132909136
  09123 Folding, sorting and degradation
   03018 RNA degradation
    132909136
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bpas03019]
    132909136
   03041 Spliceosome [BR:bpas03041]
    132909136
Messenger RNA biogenesis [BR:bpas03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     132909136
   mRNA cycle factors
    Stress granule specific factors
     132909136
Spliceosome [BR:bpas03041]
 Complex C
  Other components
   Complex C specific factors
    132909136
SSDB
Motif
Pfam: RRM_1 PABP RRM_7 RRM_occluded Nup35_RRM_2
Other DBs
NCBI-GeneID: 132909136
NCBI-ProteinID: XP_060819719
EnsemblRapid: ENSBPAG00000000831
LinkDB
Position
7:complement(14326286..14329500)
AA seq 630 aa
MNPGAPNYPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFS
AFGNILSCKVAQDESGVSKGYGFVHFETEEAANKSIDRVNGMLLNGKKVYVGKFIPRKER
EKELGEKAKLFTNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAFE
DPDAAEQAVLELNGKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERLNRYQGVNLYV
KNLDDSIDDERLRKEFAPFGTITSAKVMMEEGRSKGFGFVCFSAPEEATKAVTEMNGRII
VTKPLYVALAQRKEDRKAHLASQYMQRLANMRMQQMGQIFQPGGAGNYFVPTIPQPQRFY
GPAQMAQIRTTPRWPAQPNQVRPNAQTGSSGFATMQGPFRAAPRAPTAQPGAMRTALSAR
PITGQQTVGGANMQNRSMAGPAVGVTAQSRPSNYKYTSNMRNPPQAMAIPAPTPVQQAVH
IQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQCMYPQLTGKITGMLLEIDNSELLHMLE
HNESLKAKVEEAVAVLQAHQAKQAVASKKE
NT seq 1893 nt   +upstreamnt  +downstreamnt
atgaatccgggagctccaaattaccctatggcctcactttacgtgggtgacttgcatagt
gatatcaccgaggcgatgcttttcgagaagttttcatcggctgggcccgtactctcgata
cgcgtctgtcgtgatatgattacccgacgttcgctcggttatgcttatgttaacttccag
cagcctgctgatgcggagcgtgctcttgataccatgaacttcgacatgataaaggggcgg
ccaattcgtatcatgtggtctcaacgtgatccatctcttcgaaaatctggtgttggaaat
gtctttattaaaaatttagataaaaacatagacaataaagcaatgtatgatacgttctct
gctttcggtaatatacttagttgcaaagtagctcaagatgaatctggcgtttctaaaggt
tatggttttgtgcattttgaaactgaggaagcagcaaataaatccattgatagagttaat
ggcatgttgcttaatggaaaaaaggtatatgttggtaaatttataccccgtaaagaacgc
gaaaaggaattaggagagaaagctaaacttttcaccaacgtttatgtaaagaattttggg
gaagatatgacagacgataaacttaaagaaatgtttgaaaaatatgggaccatcaccagt
cataaagtaatgattaaagatgacggaaaatctcgaggtttcggttttgttgctttcgag
gatcctgatgcagctgaacaagctgtacttgaattaaatggaaaagaggtcgctgaagga
aagtgtatgtacgtcggacgggcgcaaaagaaggcagagcgtcagcaagaacttaagaga
aagtttgagcaattgaaattagaacgtttaaatcgttatcaaggtgtaaatctatacgta
aagaatttggacgatagtatagatgacgagcggttgcgcaaagaatttgcaccatttgga
acgattacctctgctaaagttatgatggaagaaggacgcagcaaaggctttggatttgtc
tgtttttctgctcctgaagaagctacgaaagctgtaacagagatgaacggtcgcataata
gttactaaaccattatatgttgctctagctcagcgtaaagaagatcgtaaagcacatctt
gcttctcaatacatgcaacgtttagcaaacatgcgaatgcagcaaatgggtcaaattttt
cagcctggtggcgccggaaattatttcgttcccactattccacagccgcagagattctat
ggacctgcacagatggcccaaattcgtacaactcctcgttggccagcgcaacctaatcaa
gtacgacccaatgcacaaactggaagttcaggtttcgctacgatgcaaggtccatttagg
gctgcaccgcgtgctcctactgcacaacctggtgctatgcgaactgctttgtctgctcga
cctatcacaggtcaacaaacggttggtggtgcaaatatgcaaaatcgttccatggctggt
ccagcagtgggagttacagctcaaagccgtccgtcaaattacaaatacacttcaaacatg
cgtaatcctccacaagcaatggcaattcctgctcctactcctgttcagcaagctgttcat
attcaaggccaagaaccactaactgcctcaatgttggcagctgctccaccgcaagagcag
aaacaaatgttgggagagcgtctcttcccattgattcaatgtatgtatccgcaacttact
ggaaagatcactggaatgttgttggagatcgacaactcagagctcctgcacatgttggag
cataacgaatcactgaaagccaaggttgaagaggccgtagctgtattgcaagctcatcag
gccaaacaggctgtggcttctaaaaaagaataa

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