Bombus pascuorum (common carder bee): 132909136
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Entry
132909136 CDS
T09597
Name
(RefSeq) polyadenylate-binding protein 1
KO
K13126
polyadenylate-binding protein
Organism
bpas
Bombus pascuorum (common carder bee)
Pathway
bpas03015
mRNA surveillance pathway
bpas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132909136
09123 Folding, sorting and degradation
03018 RNA degradation
132909136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpas03019
]
132909136
03041 Spliceosome [BR:
bpas03041
]
132909136
Messenger RNA biogenesis [BR:
bpas03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
132909136
mRNA cycle factors
Stress granule specific factors
132909136
Spliceosome [BR:
bpas03041
]
Complex C
Other components
Complex C specific factors
132909136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
PABP
RRM_7
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
132909136
NCBI-ProteinID:
XP_060819719
EnsemblRapid:
ENSBPAG00000000831
LinkDB
All DBs
Position
7:complement(14326286..14329500)
Genome browser
AA seq
630 aa
AA seq
DB search
MNPGAPNYPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFS
AFGNILSCKVAQDESGVSKGYGFVHFETEEAANKSIDRVNGMLLNGKKVYVGKFIPRKER
EKELGEKAKLFTNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAFE
DPDAAEQAVLELNGKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERLNRYQGVNLYV
KNLDDSIDDERLRKEFAPFGTITSAKVMMEEGRSKGFGFVCFSAPEEATKAVTEMNGRII
VTKPLYVALAQRKEDRKAHLASQYMQRLANMRMQQMGQIFQPGGAGNYFVPTIPQPQRFY
GPAQMAQIRTTPRWPAQPNQVRPNAQTGSSGFATMQGPFRAAPRAPTAQPGAMRTALSAR
PITGQQTVGGANMQNRSMAGPAVGVTAQSRPSNYKYTSNMRNPPQAMAIPAPTPVQQAVH
IQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQCMYPQLTGKITGMLLEIDNSELLHMLE
HNESLKAKVEEAVAVLQAHQAKQAVASKKE
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgaatccgggagctccaaattaccctatggcctcactttacgtgggtgacttgcatagt
gatatcaccgaggcgatgcttttcgagaagttttcatcggctgggcccgtactctcgata
cgcgtctgtcgtgatatgattacccgacgttcgctcggttatgcttatgttaacttccag
cagcctgctgatgcggagcgtgctcttgataccatgaacttcgacatgataaaggggcgg
ccaattcgtatcatgtggtctcaacgtgatccatctcttcgaaaatctggtgttggaaat
gtctttattaaaaatttagataaaaacatagacaataaagcaatgtatgatacgttctct
gctttcggtaatatacttagttgcaaagtagctcaagatgaatctggcgtttctaaaggt
tatggttttgtgcattttgaaactgaggaagcagcaaataaatccattgatagagttaat
ggcatgttgcttaatggaaaaaaggtatatgttggtaaatttataccccgtaaagaacgc
gaaaaggaattaggagagaaagctaaacttttcaccaacgtttatgtaaagaattttggg
gaagatatgacagacgataaacttaaagaaatgtttgaaaaatatgggaccatcaccagt
cataaagtaatgattaaagatgacggaaaatctcgaggtttcggttttgttgctttcgag
gatcctgatgcagctgaacaagctgtacttgaattaaatggaaaagaggtcgctgaagga
aagtgtatgtacgtcggacgggcgcaaaagaaggcagagcgtcagcaagaacttaagaga
aagtttgagcaattgaaattagaacgtttaaatcgttatcaaggtgtaaatctatacgta
aagaatttggacgatagtatagatgacgagcggttgcgcaaagaatttgcaccatttgga
acgattacctctgctaaagttatgatggaagaaggacgcagcaaaggctttggatttgtc
tgtttttctgctcctgaagaagctacgaaagctgtaacagagatgaacggtcgcataata
gttactaaaccattatatgttgctctagctcagcgtaaagaagatcgtaaagcacatctt
gcttctcaatacatgcaacgtttagcaaacatgcgaatgcagcaaatgggtcaaattttt
cagcctggtggcgccggaaattatttcgttcccactattccacagccgcagagattctat
ggacctgcacagatggcccaaattcgtacaactcctcgttggccagcgcaacctaatcaa
gtacgacccaatgcacaaactggaagttcaggtttcgctacgatgcaaggtccatttagg
gctgcaccgcgtgctcctactgcacaacctggtgctatgcgaactgctttgtctgctcga
cctatcacaggtcaacaaacggttggtggtgcaaatatgcaaaatcgttccatggctggt
ccagcagtgggagttacagctcaaagccgtccgtcaaattacaaatacacttcaaacatg
cgtaatcctccacaagcaatggcaattcctgctcctactcctgttcagcaagctgttcat
attcaaggccaagaaccactaactgcctcaatgttggcagctgctccaccgcaagagcag
aaacaaatgttgggagagcgtctcttcccattgattcaatgtatgtatccgcaacttact
ggaaagatcactggaatgttgttggagatcgacaactcagagctcctgcacatgttggag
cataacgaatcactgaaagccaaggttgaagaggccgtagctgtattgcaagctcatcag
gccaaacaggctgtggcttctaaaaaagaataa
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