Bombus pascuorum (common carder bee): 132909298
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Entry
132909298 CDS
T09597
Name
(RefSeq) regulator of nonsense transcripts 3A-like
KO
K14328
regulator of nonsense transcripts 3
Organism
bpas
Bombus pascuorum (common carder bee)
Pathway
bpas03013
Nucleocytoplasmic transport
bpas03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132909298
03015 mRNA surveillance pathway
132909298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpas03019
]
132909298
Messenger RNA biogenesis [BR:
bpas03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
132909298
mRNA cycle factors
P-body specific factors
132909298
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
132909298
NCBI-ProteinID:
XP_060820041
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Position
7:complement(14417122..14421224)
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AA seq
620 aa
AA seq
DB search
MTMTEETQQSETTAQNEAQTSSPDVGKVKDSKKEKCRPMTKVVIRRLPPTMTQEQFLEQV
SPLPEHDYLYFVKADMSLGQYAFSRAYINFVEQQDIFMFREKFDNYVFVDSKGTEYPAVV
EFAPFQRLPKKRIGKKKDLKCGTIESDPYYISFLESLKNQEAESNVSQPKTEYSYQPPDN
TPKKVTTTPLLEYVKQRKQEKQRLRDEKREERRRRDLERRRTKEDPIISKVLKNPDLDKE
MCKDNKENREEKDKLSPKDIKNRIKKEDKLRDKVPRDRDSKSITKGYRERIEDRNKDRDI
KHQRRHEDKKIYGRRDERDGIKDDRRFDGKDDRKYDFKEDTKDSRERKIEEKRGKSYEKM
RQEKKRLAETKKQNVEFSVDTENSAKLRSEDEEFQKKEPPVDLYENIKENDEAMGDKEDA
KYNKGKEKQETNERKVLIEDSVRDFGTTDQKRTETAVESNKDIEKSKSNEDINKEINEDD
ESEEKKDSKVTKRRSSLESGGEGGTGDGNCLRRHKSLDGGDQNNLQKTENEDKEKDKKDP
RLERRIRNKDRPTMEIYRPGMGKFSKQRLEREKSNTNDERASLSQSPTPNPNSNNLCKSG
KPGTEVRSMTFKRSISRDLV
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgactgaggaaacacaacaatctgagacaaccgcacaaaatgaggcacaaact
agttctccagatgttggaaaagttaaagatagtaaaaaagaaaaatgccgacctatgact
aaggtagtaatacggagattacctccaactatgactcaagaacaattcctagagcaagtt
tctccattgccagaacatgattatctttattttgtaaaagctgatatgtctttgggacaa
tatgctttttcccgtgcatatattaactttgttgagcaacaggatatttttatgttcaga
gagaaatttgataattatgtatttgtcgactctaaaggaacagaatatccagcagtagta
gaatttgcacctttccaaaggttaccaaagaaaagaataggaaaaaagaaagatttgaaa
tgtggtacaatagagtcagatccatattatataagtttcttagaaagtcttaaaaatcaa
gaagctgaatctaatgtatcacagccaaaaacagagtactcatatcaaccacctgataat
acaccaaaaaaagttacaaccacacctctcttagaatatgtgaaacaacgtaagcaggag
aaacaacgtctcagagatgaaaaacgtgaagaaagacgacgaagagatctagaaaggagg
cggacaaaggaagatcctattatatctaaggtattgaaaaatccagatcttgataaagaa
atgtgtaaagataataaagaaaatagggaggaaaaggataaactttcacccaaagatata
aaaaatcgtattaagaaagaggataaattacgtgacaaggtaccgcgtgatcgagattcc
aaatcaataacaaaaggatatagggaaagaattgaagatagaaataaagatagagatata
aaacatcaaagacgacatgaagataaaaagatatatggaagacgtgatgaaagagatggt
ataaaagatgatagaagatttgatggaaaagatgatagaaaatatgattttaaagaagat
actaaagattctagggaacgaaagattgaggaaaaacgaggtaaaagttacgaaaaaatg
agacaagaaaaaaaaaggcttgcagaaaccaaaaaacagaatgtagaatttagtgttgat
acagaaaatagtgctaaattaagaagtgaagatgaagaattccagaagaaagaaccacca
gttgatttgtatgaaaatattaaagaaaatgacgaagctatgggtgataaggaggatgct
aaatataataaaggaaaagagaaacaagaaactaacgaaagaaaggttctaatagaagat
tctgtgcgtgattttgggacaacggatcagaaaaggacagaaacagctgttgaaagtaac
aaagacattgagaaatcaaaatccaatgaagatattaataaagaaattaatgaagatgat
gaatctgaagaaaagaaggattcaaaagtcacaaaaaggcggagttcacttgaaagtgga
ggggaaggtggtacaggagatgggaattgtttaaggaggcacaagtctttagatggagga
gatcaaaataacttacaaaagactgaaaatgaagataaagaaaaagataaaaaggatcca
cgattagaacgtcgaattagaaacaaagatcgtcctaccatggagatctatcggcctgga
atgggaaaatttagcaaacaaagattagaacgagaaaaatctaatactaatgatgagaga
gcatcgctttcgcaaagtcctactccaaaccccaattctaataatctttgtaaatcagga
aaacctgggactgaagtgcgatctatgacgtttaaacgtagtattagtcgtgatttggta
taa
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