Bombus pascuorum (common carder bee): 132909756
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Entry
132909756 CDS
T09597
Name
(RefSeq) probable DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
bpas
Bombus pascuorum (common carder bee)
Pathway
bpas03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
132909756
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpas03400
]
132909756
DNA repair and recombination proteins [BR:
bpas03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
132909756
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_22
ARM_CUL7_CUL9
Motif
Other DBs
NCBI-GeneID:
132909756
NCBI-ProteinID:
XP_060820764
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All DBs
Position
8
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AA seq
1129 aa
AA seq
DB search
MSKVNTLYNYFISPKTPKTPKQSNNKPDEKPSTPKRPREQRNKAKIPSKGKENIDVKDKK
NVFKDDDDEEEETEEKEIVQPKKRRLIIPDEESGEDSGDEFKPDPEDESEDSDSVSEEVS
ESEPPTASEEESPEKKIKLAKAPRKKREISTMKNTKDAKKESKPQQQNQTKGSDSITESW
PHLKYDFLQPNKIQDIRRKPPSHPDYDPKTLYVPQDFLNQQTPAMRQWWELKSKHFDCVL
FFKVGKFYELYHMDAVISVNEINLTYMRGEFAHSGFPEIGYGRFSASLIERGYKVARVEQ
TENPDMMAQRCSKMTRPTKFDKVVKREICQISSKGTRVYTPQDVEASMANSNYLLSLVEK
CPSGSNTSHYGVCFLDTTIGDFYLGQFEDDRCNSRILTLLAHYPPVHVVYERGNLSQKTL
KILNNTLAACIKEPLLRESQFWSSSTTLKNLHEGEYFKSSDSQFQWPAGLQPYLNQNDTL
GLTSADDKELAVHALGGCVYLLKYYLLEQQLLAQGRFKTYTPPDFSNEKSVASNFANNMV
LDAITINNLRIFGEGSLMKTLDRCCTAFGKRLLREWICRPSCRKNVIIERQQAIQELMDN
TEVMQNARSILAGLPDLERLLSKIHAQGNAAKMNNHPDGRAIMFEGQTYSKKKIADFIVT
LSAFEDVLKIVALFKDFKSTIVSRCTKIEPDGEFPSLRESLDYFKTAFDHEEAKKVGCIV
PKRGVDNEYDSVLIELDDVKADAQEYLEKQRKHFGVKVTFHGSDKKRYQIEIPDSQIKKI
GSGYELQSQRKGYKRYYTAETKELLSRQINAEEHRDKVLKDLNRRIFAKFSEKYDMWNMA
VYKLSILDVLISLAEYALSGDMCIPEVNDGTDERVFIDIRDGWHPCIISDTFIPNNTLLG
IENSASFMILTGPNMGGKSTLMRQVALLTIMTQIGSYVPASSCRLTLVDRIFTRLGANDD
ILAGQSTFLVELSETAAILRHATPYSLVLLDELGRGTSTYDGTAIAASVVNALTKLNCRT
LFSTHYHSLVEDYKNTKEITLAHMACMVENEEQDEVSQETVTFLYKLSEGACPKSYGFNA
ARLAGVPSVITNRAHEISKKLEQETNYKHLFTSLCKANGSAIRDLIAAM
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaagtgaatacattgtacaattattttatttcgcctaaaactcctaaaactcct
aaacaatcgaataataagcctgatgaaaaacctagtacaccgaaaagaccaagagaacaa
cggaacaaagcaaaaattccaagcaaagggaaagaaaatatagatgtcaaagataaaaaa
aatgtctttaaagatgatgatgacgaagaagaggaaacagaagaaaaggaaatagtacag
ccaaaaaagcgaagattgattatccctgatgaagagtctggagaagattctggtgatgaa
tttaaacctgatccagaagatgaatcagaagattctgattcagtatctgaagaagttagt
gaaagtgagccaccaacagcaagtgaagaggaatctccagagaagaaaataaaattggct
aaagctcctagaaaaaaacgggaaataagtacaatgaaaaataccaaagatgctaaaaaa
gaatcaaaaccacagcaacaaaatcaaaccaaaggttccgacagtattacagaatcttgg
ccacatttaaagtatgatttccttcaaccaaataaaatacaagatattcgtagaaaacca
ccaagtcatccagattatgatcctaaaactctttatgttcctcaggatttcttgaatcaa
caaactccagccatgagacaatggtgggaattaaaaagcaaacatttcgattgcgttctt
ttctttaaagtaggaaagttttatgaattgtatcatatggatgctgtaattagtgtcaat
gaaatcaatcttacatatatgagaggagaatttgcgcattcgggatttccagaaattgga
tatggtcgtttctcagcaagtctcatagaaagaggctacaaagttgccagggtagaacaa
acagaaaatccagacatgatggcacaacgttgtagcaaaatgactagaccaacaaagttc
gacaaagtagttaaacgagaaatttgtcaaataagcagtaaaggtacaagagtatacact
ccacaggatgtagaagcatctatggcaaattccaattatttgttatcactagttgaaaaa
tgtccatctggttcaaacacatctcattatggagtgtgtttcttagatactacaatagga
gacttctatctcggtcaattcgaagacgatcgatgcaattctagaatactaactttgctc
gctcattatccgccagttcatgtggtttatgaacgaggtaatttgtctcaaaagacccta
aagatcttaaataacactttagcagcgtgtattaaagaaccacttttacgtgaatctcaa
ttttggtcatcttcgactacgttaaaaaatcttcatgaaggagaatacttcaaaagttca
gactctcagtttcaatggcctgcaggcttgcaaccgtatcttaaccaaaatgatacttta
ggtttaacttctgctgatgataaagagttagcggtgcatgccttaggtggatgtgtatac
ttactcaaatattatctgcttgaacagcaattattggcacaaggacgttttaaaacatat
actccgccagatttttcaaatgagaaatctgtggcttcaaactttgccaataatatggtt
ttagatgctattacgattaataatttgagaatattcggcgaaggttctctcatgaaaaca
ctggatcgttgctgtactgcattcgggaagaggttactgcgagaatggatttgcagacca
tcctgtcgcaaaaacgttataatcgaacgtcaacaagctatacaagaattaatggataat
acagaggtgatgcaaaatgctcgtagtatattagcaggactccctgatcttgaaagatta
ttaagcaagatccatgcacaaggaaatgcagcgaaaatgaataatcatccagacggcagg
gcgattatgttcgaaggtcaaacgtattcaaagaaaaagatcgcagattttattgttact
ctgagtgcgtttgaggatgttctaaaaattgttgctttgttcaaagatttcaagagtact
atagtaagtcgatgtactaaaatagagccggatggcgagtttccttcattaagagaatca
ttagattattttaagaccgcattcgatcacgaagaagccaaaaaagtaggctgtattgtt
ccaaagagaggagtcgataatgagtacgactctgttttaatagaattagatgatgtaaag
gcagatgcccaagagtaccttgaaaagcaaagaaagcacttcggtgtgaaagtcacgttt
catggatcggataagaaacgttatcaaatcgagattccagattctcaaataaagaaaatt
ggttccgggtatgagcttcaatcgcaaagaaaaggatacaaacgctattacactgccgaa
actaaggaacttttgagtcgacaaataaacgctgaagaacacagagataaagtactaaag
gatttaaacagaagaatatttgcaaaatttagcgagaagtatgatatgtggaatatggcg
gtttataagttgtctatcttggatgttcttatttctttggcggaatacgctctcagcgga
gatatgtgtataccagaagttaacgatggtacagatgaaagggtatttatcgatattcga
gacggatggcacccatgtattatctcagatacatttataccaaataacactttactagga
attgaaaattctgcttcttttatgattcttactggaccgaatatgggtggtaaatcaaca
ttgatgcgtcaagtcgcccttcttactataatgacgcaaattggaagttacgtccctgca
agttcctgccgtttgacattagtagatcgtattttcacaaggctcggcgcaaatgacgat
attctagctggtcagagtacgttcttggtagagttgagcgaaactgctgcgatattacgg
cacgctacgccatactcgctagtgttgcttgatgaattgggtcgtggtacgtcgacgtat
gacggcacggcaatagccgcttcagttgtgaatgcacttacaaaattgaattgccgtact
ctattttcgacacattatcattctttggtagaagattataagaatacaaaagaaattaca
ttggcccatatggcatgtatggtagaaaatgaggaacaggatgaagtgtctcaggaaaca
gtaacatttttgtacaaacttagcgagggagcttgtccgaaatcatacggttttaacgct
gctcgattagctggcgtcccatctgtaattacaaacagagcgcatgagatctcaaagaaa
ctcgaacaagagacaaattataaacatctcttcaccagcctatgtaaggcgaacggatca
gccataagggatctaatcgctgcaatgtga
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