Bombus pascuorum (common carder bee): 132909869 Help Entry 132909869         CDS       T09597                                  Name (RefSeq) collagen alpha-1(I) chain-like   KO K19719   collagen type II alpha Organism bpas  Bombus pascuorum (common carder bee) Pathway bpas04512   ECM-receptor interaction bpas04518   Integrin signaling Brite KEGG Orthology (KO) [BR:bpas00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     132909869    04518 Integrin signaling     132909869  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:bpas00536]     132909869 Glycosaminoglycan binding proteins [BR:bpas00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    132909869 SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI PBP1_TM Motif Other DBs NCBI-GeneID:  132909869 NCBI-ProteinID:  XP_060821005 LinkDB All DBs Position 8:16361192..16373034 Genome browser AA seq 1508 aa AA seqDB search MGPKALRLAAAFAVIQLLLPQVHSIRTKLRKQRSKPLQAQQAANGDYDYDYYEGYDDYDD RNETTTTTAPSLPVTSSVNTASRGELPTETLQTFYRPGLSTDVPTQATIRTFSQVGILPN EVQTTPEQNHASPTEIVPGESNVISAVAVPGPRGEPGRPGDMGRPGDTGFPGHPGSPGIP GPPGPPGPIPDVSMYYQQLALSQANQDKGPTGAAAPLYGPEAYLQMQTGPIGPRGPSGPP GPPGPQGFQGVRGEPGEPGTLGPPGAPGPRGLAGLPGKDGNTGEDGEPGPPGSVGPVGPR GLPGMPGLPGVKGHRGFPGLDGAKGEQGVSGEKGSMGVPGPMGHLGPMGPAGPRGERGRE GPPGPPGIRGVDGIAGPPGQPGTVGKPGSPGFPGSPGVKGDQGAQGPKGSQGIQGPRGET GRPGQPGESGPQGPQGKDGIPGEKGSTGAPGLVGAPGFPGARGQPGIPGNPGVPGAKGMP GLSGERGFKGDSGAKGDSGTPGPRGLPGPPGNEGKRGKRGMRGPIGTSGPAGERGAPGAP GLPGPDGPMGPKGQSGDRGPIGPMGLRGANGDPGRPGSPGLQGTRGLMGRPGAPGKPGNP GDRGIQGADGKPGEQGPAGLQGLPGPIGLPGEKGYPGEPGKAGEPGNPGPPGPRGDTGKE GAPGPQGSPGPSGIDGERGPPGSPGPRGFQGFPGVTGNPGTPGKDGESGVQGPPGPPGIP GNRGERGFPGERGTPGGPGLTGPRGEPGAQGLDGPPGLPGAKGDRGISGPPGLVGLPGLR GATGESGPKGERGSSGPPGPEGPPGRIGERGPQGQIGSPGPPGEPAERGDPGLPGPPGEV GAPGNPGERGPQGLQGLQGFPGPQGLIGLPGLKGDRGYPGLKGDQGNPGLAGSPGETGPQ GLVGLTGAKGVRGEPGARGEPGIMGPPGVPGIVGATGPPGAIGPSGPPGLPGSKGNIGET GRAGNPGPIGNPGSPGADGNKGESGSQGPPGTPGPQGPQGSPGERGLPGLPGPSGPIGAR GIRGAPGESGVSGKPGPEGPPGPPGQVGPIGPHGPSGEIGAEGPSGKPGPPGIAGRPGDK GPPGAVGQTGLPGSPGLPGPPGQAGAPGSTGERGPKGETGPQGVEGQQGPRGKPGPIGLE GPKGDRGEEGQKGAKGHRGFTGLQGLPGPTGLPGEKGIPGLPGLPGKDGESGPRGSPGRD GSPGPIGLTGNPGPKGPSGEEGRHGPPGPPGPPGPPGPPGELGLGYDAASLAALLGQGQT KGPDPLVGDEPPRMFSQDMTEEERKELILKAYKQLKSSFQKFVKPDGGKSSPAKTCRDLY TAYPDKLSGEYWIDPNEGDTRDAILVYCDAKKRATCLLPNPVRSPEINYITDQPETWLSE IENGMKITYKADSNQIGFLQLLSRHAYQNIIYHCKNSIGYFDSERKTYRKGMKFLTWNDV ELTPRGNQRLRYEMITDECRTYNGQWGKTVISYETDKPVRLPIIDVALRDIGKPDQSFSI EIGTVCYE NT seq 4527 nt NT seq  +upstreamnt  +downstreamnt atggggccgaaggcccttcggttagccgcggcgttcgccgtcatccaacttcttttgccg caggttcattccatacggaccaaactcaggaaacaacggtccaagccgctgcaagctcaa caagccgcgaatggtgattacgattacgactattacgagggttacgatgactacgatgat agaaatgaaactacaactacaactgcgccatcactacctgttacatctagcgtcaatact gcaagtaggggtgaattaccgacggagacattgcaaactttctacagacctggactgtct acagatgtaccaacgcaagcgacaattcgaactttcagtcaagtcggtatattaccaaac gaagtgcaaacaacaccagaacaaaatcatgcatcaccgacagagattgttcctggtgaa agtaacgtgattagcgcggtcgctgttcctggacccaggggggaacctggtcgacctgga gatatgggtcgtccgggagatactggatttccaggacatcctggatctccgggaattccg ggacctccggggccaccagggcctatacctgacgtatcaatgtattatcaacaattagct ttatctcaagcaaatcaagataaaggaccgacgggagcagcagcacctttgtatggtcca gaagcctatttacaaatgcaaactggtcctatcggaccgcgtggtccatcaggtccacct ggaccacccggaccgcagggttttcaaggagtacgaggagaacctggtgaacctggtact ttgggtcctccaggagcgccaggtcccagaggattagctggtttaccgggaaaggatggt aataccggtgaagatggagaacctggtcctccaggatcggttggtccagtcggaccaaga ggtctaccggggatgcctggtcttcctggtgtaaaaggacaccgaggttttccagggtta gatggtgcaaaaggagaacaaggtgtatctggtgaaaaaggatccatgggcgtacctgga ccgatgggacatctaggcccgatgggccctgcaggtccacgtggtgaaagaggtagagaa ggtcctcctggacctccgggaattagaggagtggatggtattgctgggccccctggtcaa cctggtacggtaggtaaaccaggttctcctggatttccaggtagtccaggtgtaaaagga gatcaaggagcacaaggaccaaaaggaagccaaggcatacaaggcccccgaggtgaaact ggtcgtcctggtcaacctggtgaatcaggaccacagggtccccagggaaaagatggaata cctggagaaaagggaagtacaggagcacctggtttagttggtgctccaggtttccctgga gctcgcggacaacctggaatacctggcaatcctggtgttccaggagcgaaaggcatgcct ggactttcaggtgaaagaggattcaaaggtgatagtggagctaaaggtgattcaggaact ccagggccacgtggtttgcctggtcctcctgggaacgagggtaaacgaggaaaaagagga atgcgcggaccaattggtacatccggtcctgccggagaacgtggagcaccaggcgcacca ggtcttccgggacctgatggtcccatgggacccaaaggtcagtctggggatcgtggacca attggaccaatggggctcagaggagctaacggagatcctggtcgcccaggatctcccggt ttacagggtacacgtggtttaatgggtcgccctggtgctcccgggaaaccaggaaaccca ggagaccgaggaattcaaggtgctgatggaaaaccaggtgaacaaggtccagctggatta caaggtttacctggtccaataggtctcccaggagaaaagggatatccgggtgaaccagga aaagctggtgagccaggaaatcctggaccacctggtcctagaggtgatacgggaaaggaa ggagcaccaggacctcaaggttcacctggaccatcaggaatagatggtgaacggggacct ccaggatctccaggtcctagaggttttcagggttttccgggcgttactggtaatccagga acaccaggaaaagatggagaatcaggtgttcaaggaccacctggtccaccaggtattcct ggaaatagaggtgaacgaggatttcctggtgaaagaggtacaccaggaggaccaggatta acaggaccaagaggagaaccaggtgcacaaggattagatggaccgcccggattacctgga gcaaaaggagatcgaggaatttcaggaccacctggattagtaggattgcctggcttacga ggagctacgggagagtcaggtccaaaaggagaaagaggatctagcggaccgcctggccct gaaggacctccaggacggattggagagcgtggaccacaaggtcaaattggctcaccggga ccgccgggtgaaccagcagaacgaggcgatcctggattacctggacctccaggagaggta ggtgctcctggcaatccaggagaaagaggaccccaaggattacaaggactgcaaggcttc ccaggaccacaaggactcattggtttaccaggattaaagggtgaccgtggttatccaggt ttaaaaggagatcaaggaaatcctggtctagctggtagcccaggtgaaactggaccacaa ggtctagttggtttgacgggagctaaaggagtacgaggagaaccaggtgctagaggagag cctggtattatgggaccaccaggagtaccaggaatcgttggtgcaacgggcccgccaggg gcaataggaccatcaggaccgcctgggttaccaggtagtaaaggtaatatcggagaaaca ggacgagccggaaatcccggacctattgggaatccaggttcacctggtgcagatgggaat aaaggcgagagtggttctcaaggaccaccaggtactcctggccctcaaggtcctcaaggc tctcctggtgaaagaggattacctggtttaccaggcccgtctggaccaataggcgctaga ggaatacgaggagcacctggtgaatctggtgtatctgggaaacctggaccagaaggtcca cctggacctcctggacaagttggaccaattggaccacatggaccatcaggagaaattgga gcagaagggcccagtggtaaacctggaccacctggaatagcaggtcgtcctggagataaa ggaccaccgggagcggtaggacaaacgggattgcccggctctcctggtttacccggacca cctggccaagcaggtgctccaggatcaactggagaaagaggaccaaagggcgaaacagga ccacaaggtgtagaaggacagcaaggacctagagggaaaccagggcctataggattggaa ggtcctaaaggtgatcgcggagaagaaggccagaagggtgcgaaaggccatcgaggattt actggtttacaaggtttacctgggcctactggtctaccaggggagaaaggaatacctgga cttcctgggctacctgggaaagatggcgaatctggacctagaggtagtcctggacgagat ggcagccctgggccaattggattaactggcaatccaggaccaaaaggtccttcaggtgaa gaaggtcgccatggaccaccaggtcctcctggtcctccagggcctccaggtccacccggt gaacttggattaggatatgatgctgcttctttagctgcacttttagggcaaggtcaaact aaaggaccagatccattagttggtgatgaaccacctagaatgtttagtcaagacatgaca gaagaagaaaggaaagaactcattttgaaagcatataaacaattgaaatcatcattccag aaatttgtaaaaccagatggtggaaaaagttcaccagccaaaacttgcagggacctttat actgcttatccagataaactttctggagaatattggattgatcctaatgaaggtgataca agagatgcaattttagtgtactgcgatgctaagaaacgtgcaacatgtttattgcctaat cctgtacgttccccagaaattaactatattactgatcaaccagaaacttggttaagcgaa atagaaaatggaatgaagattacatataaagcagatagtaatcaaattggctttttgcaa cttctatcgagacatgcataccaaaatataatatatcactgtaaaaatagcataggctat tttgattctgagcgaaagacgtatagaaaaggtatgaaatttttaacctggaatgatgta gaattaacaccacgtggaaatcaacgtctaagatatgaaatgataactgatgaatgtaga acatataatggacaatggggtaaaacagtaatttcatatgaaactgataagcctgtaaga ctacctataatagatgtggccttacgagatattggaaaaccagatcaaagcttttctatt gaaatcggtactgtttgttatgaataa

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