Bombus pascuorum (common carder bee): 132909944
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Entry
132909944 CDS
T09597
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog isoform X1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
bpas
Bombus pascuorum (common carder bee)
Pathway
bpas04140
Autophagy - animal
bpas04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
132909944
04148 Efferocytosis
132909944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bpas04131
]
132909944
Membrane trafficking [BR:
bpas04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
132909944
Hops complex
132909944
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Beta-prop_WDR19_1st
Beta-prop_Vps41
TMP_4
Motif
Other DBs
NCBI-GeneID:
132909944
NCBI-ProteinID:
XP_060821193
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Position
8:complement(5057857..5062438)
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AA seq
835 aa
AA seq
DB search
MLAMLTADWFPLGRDIYFRKFELYPLSFQDEVSSNNVLVAAPYGGSIAVTRNSKKLVKVQ
GANKPTIYLYTSSGKLTAKLQWSGGQLILLGWSQQEELLCVEDDGMVHIYDMFGTYQHAF
SMGNEVKDTKVVEAKFFVSYSGTGIAVLTSTNRIFLVNNIVEPKVRQISEIPRYGGQIEC
WCLVHCDRETRVILSNRDGIFVIHQSHQNATHIPFDNLFTRHNKVFTIVAMAVSGNNRHI
ALYTDTGHLYMGTIDFNEKYCEHYTNMKEPLENIAWCGTEAVICSWNSTVMVIGRTAETI
IYTYDGPVHLITEIDGVRVLSGSSHEMIQKVPNVVQKIFRINSTDPASYLLEASKQFQKR
SHKADSYMDLVKDKLDAAIKACIDGAGHEFDFETQKLLMRAAKFGKGFSKTINPEYYVNM
CRTLRVLNAVRHPAIGIPLTYTQFTILTSQVLLDRLVARRHYYLSIQIARHLQLPEIDGE
SRILAHWACYKVKQTQLDKEQIAEEIADKLGYAPGVSYSEIARRAADCGRKQLAIKLIDY
EPRAHQQVPLLLTLGEERAALRKAVESGNTDLVYTVILHLRENMPLGDFQMSIMHCPLAM
ALYIKYCQNHNRETLRDIYNQYDDFHSQAIWFITESYQRKNTMSREALLQSAQENFKLAR
NDTNAALTEEQIKLLRYQRSMEDVLKKPIVGKPLQDTVKVLLLRNEYKLADKLRSEYKIS
DRRYWWLRIQCLAEQGVWNELEKFSKSKKSPIGYEPFIDQCLKYNEEREAKKYLPKVRDE
LKVKYLVKLKMMNEAVQTAIEQKDVNALTYLLGQCETTDRQLIDKINVYLTSLKN
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgttagcaatgttaaccgccgattggtttcctttgggtcgagacatttattttagaaaa
tttgaattgtatcctttatctttccaagacgaagtatcaagtaataatgtattagtggca
gctccttatggaggttctatcgcagtcaccagaaattctaaaaaattggtgaaagttcaa
ggagcgaataagcctacgatatatttatacacatcttcaggaaaactaacagccaagttg
caatggagtggggggcaactaattcttttgggctggtctcaacaagaagaattactatgt
gtggaagacgatggcatggttcatatatatgatatgtttggtacatatcaacatgctttt
agtatgggaaacgaagtgaaagatactaaggttgtagaagcaaaattttttgtcagttac
agtggaactggtattgcagttctaacatctactaatcgtatatttctggtgaataatata
gttgaaccaaaagttaggcaaatatctgaaattcctagatatggtgggcaaattgaatgc
tggtgtttagttcattgcgatagagaaacgcgtgtgatattatcgaacagagatggaata
tttgtaatacatcagtctcatcaaaatgcaactcatataccatttgacaacctttttacc
agacacaataaagtgttcactatagttgctatggcagtgtctggaaacaatcgtcatatc
gctctttatacggatactgggcatttgtatatgggtactatagatttcaatgaaaaatat
tgtgaacattatacaaatatgaaagagcccttagaaaacatagcatggtgtggaacagaa
gctgtaatatgtagttggaatagtactgtaatggtaatcggacgaacagccgaaaccata
atatacacgtacgatggaccggtacatcttattacagagattgatggtgtacgtgtatta
tctggttcttctcatgaaatgatacaaaaagtaccgaatgtcgttcaaaaaatatttcga
attaattcaactgatcctgcgtcttatttattggaagcttctaaacagtttcaaaaaagg
agtcataaagctgatagttacatggatttagtcaaagataaattagatgctgcaataaaa
gcttgcatcgatggagctggccatgaatttgattttgaaacacaaaagcttttaatgagg
gctgctaaatttgggaaaggatttagtaaaacaattaatcctgagtattacgtcaacatg
tgtcgaaccttaagagttttaaatgcagtaaggcaccctgcaattggaattccactaaca
tatacacagttcactattctcacgagtcaagtgttattggatagactcgttgcaagaaga
cattactatctaagtatacaaattgcacggcatcttcagttaccagagatcgatggagaa
agtcgaatattagctcattgggcttgctataaagtaaaacagacgcaattagataaggaa
caaatagcagaagaaatagctgataaattaggctacgcgcctggtgtttcttatagcgaa
attgcaagaagagcagccgactgcggccgaaaacaactagcaattaaactgattgattac
gaaccacgtgcacatcaacaagtgccacttctattaacgcttggtgaagaaagagccgct
ttacgtaaagccgttgaaagcggaaataccgatttggtttataccgtaatacttcatctc
agggagaacatgccactcggtgattttcagatgtccataatgcactgtcctttagctatg
gctttatacatcaaatactgtcaaaatcataatcgagaaacacttcgcgatatttataat
caatatgatgattttcattctcaagcgatatggttcattaccgagagttatcagcgaaag
aatacgatgtcaagagaagcattattacaatctgcacaggagaatttcaagttagctcgt
aacgatactaatgcagctttgacagaagaacaaataaaattattacgctatcaaaggtct
atggaagatgtattaaagaaaccgattgtagggaaaccacttcaggatactgtaaaagta
ttactattgcgcaatgaatacaaattagctgataaattaagatcagagtataaaatatcg
gatcgaagatattggtggttacgaatacaatgtttggccgagcagggcgtatggaacgaa
ttggaaaaattctccaaaagtaaaaaatcccctattggttatgagccttttattgaccaa
tgtttaaaatataacgaagaaagggaagcgaaaaaatatttacctaaagtaagggacgaa
ttgaaagtaaaatacttggttaaattaaaaatgatgaacgaggccgttcaaacggcgata
gaacaaaaagatgttaatgcgttaacttatttactaggtcagtgcgaaactacagacagg
caattaattgataaaattaatgtgtatttaacaagtcttaaaaattga
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