Bombus pascuorum (common carder bee): 132910045
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Entry
132910045 CDS
T09597
Name
(RefSeq) ATP-dependent RNA helicase Ddx1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
bpas
Bombus pascuorum (common carder bee)
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bpas03041
]
132910045
03016 Transfer RNA biogenesis [BR:
bpas03016
]
132910045
Enzymes [BR:
bpas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
132910045
Spliceosome [BR:
bpas03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
132910045
Transfer RNA biogenesis [BR:
bpas03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
132910045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
132910045
NCBI-ProteinID:
XP_060821451
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All DBs
Position
8:1831986..1835338
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AA seq
733 aa
AA seq
DB search
MTAFEEMGVLPEIAKAVDEMEWTLPTDVQAEAVPLILGGGDVLMAAETGSGKTGAFCLPV
LQIVWETFKDLESGKTGKTSSNSGHQQHSSHWLLSLFDRGKALAVTPDGLRCQSREQKEW
HGCRTNKGIQGKDKYFFEAIVTDEGLCRVGWSTSQASLDLGTDKFGFGYGGTGKKSNAKQ
FDNYGKAFGMHDVVGCLLNLSKGEISFTLNGMDMGPAFTLNAQQRSQTFYPAVVLKNAEM
SFNFGAQPFKYPPPNDYIAVASAPKEVIKENPINSSQTPRENGKPKCNAPQAIIMEPSRE
LAEQTYNQIQKFKKHLKDPVIRELLVIGGVSVKEQIATLNSGVDIVVGTPGRLEDLIQGG
YLSLTHCRFFILDEADGLLKQGYTELIDRLHRQIPKITSDGKRLQMIVCSATLHAFEVKK
MAERLMHFPTWVDLKGEDAVPETVHHVVVIIDPQKDKSWHNLRKHIETDGIHSRDNVRPG
NNNPETLSEAVKILKGEYCIRAIKEHNMDRAIIFCRTKLDCDNLERYLKQSGGNQFSCVC
LHGDRKPAERKSNLEKFKRQEVKFLICTDVAARGLDISGLPFMINMTLPDEKSNYVHRIG
RVGRAERMGLAISLVSKVPEKVWYHGEWCSSRGRNCYNTNLTDKGGCCIWYNEPNYLAEI
EDHLNVTIQQVDADIKVPLNDFDGKVVYGEKKAAMGSNYQNHVQQMAPYVNELSSLESKT
QLLYLKRHLVKTS
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgactgcattcgaagaaatgggtgttttacccgaaatcgcgaaagcagttgacgaaatg
gagtggacattgccaactgatgttcaagctgaggcagttccattaattttgggtggtgga
gatgtgttaatggctgcagaaactggcagtggaaaaactggtgccttttgtctaccagtt
ttgcaaattgtctgggaaacttttaaggatctagagtctggtaaaacgggcaagacctcg
agcaatagtggacatcagcaacattcttcacattggttgttaagtttatttgatagaggt
aaagcattagctgtgactccggatggtttacgatgccagagtcgtgaacagaaagaatgg
catggttgtagaacaaacaaaggaattcaaggaaaagacaaatacttcttcgaagctata
gtaactgatgaaggattatgtcgtgtaggctggtctacatctcaagcttcgctggattta
ggaacagataaatttggttttggatatggtggtactggcaaaaaatcaaacgcaaaacaa
tttgataattatggaaaggcttttggaatgcatgatgttgttggatgtcttctgaattta
tcaaagggtgaaattagcttcacattgaatggtatggatatgggtccagcatttactctg
aatgcacaacaaagatcacagactttttacccagctgtagtattgaaaaatgcagaaatg
tcattcaattttggagcacagccatttaagtatcctcctccaaatgattatatagctgtt
gcttcagctcctaaggaagttataaaagaaaatcctataaacagtagccaaactcctagg
gaaaatggcaagcctaaatgcaatgccccccaagctataatcatggaaccttcgagagaa
cttgctgaacaaacatataatcaaattcaaaaatttaaaaaacatttgaaagatccagtc
attagagaattgttagttattggaggagttagcgtaaaagaacaaattgctacattaaat
tctggtgtggatatagtagttggtacaccaggtcgtttagaagatttaatacaaggtggc
tacttgtccttaacacattgcaggttcttcattttggatgaagccgatggtttattgaaa
caaggttacacggaattaatcgatcgtttgcacagacagataccaaaaattacatcagat
gggaaaagattacaaatgatcgtttgttctgccacactgcatgcatttgaagttaaaaaa
atggcagaacgtttgatgcactttccaacgtgggtagacttgaaaggtgaagatgcagtt
cccgaaacagtacaccatgttgttgtaataatcgatccacagaaagataaatcttggcat
aacttaaggaaacatatagaaactgacggtattcatagcagggataacgtaagacctgga
aataacaatcctgaaacactctcagaggctgtgaaaatactaaaaggtgaatactgtatt
cgtgccattaaagaacacaacatggacagagctataattttctgtagaactaaattagac
tgcgataacttggaacgatatttgaaacaatctggtggaaaccaattttcatgcgtatgt
ctccatggtgatagaaagcctgcggaacgcaaatctaatttagagaagttcaaaaggcaa
gaagtaaagttcttgatttgtaccgatgtcgcagctagaggtttagatatttcaggatta
ccttttatgattaatatgactctacctgacgagaaatccaactacgtacatcgcataggt
agagtcggtagagctgaacgaatgggtctagcaatttcattagttagtaaagttcctgaa
aaagtatggtatcacggtgaatggtgttcttctcgtggaagaaactgttacaatacgaat
cttactgataagggtggttgttgcatttggtacaacgaaccgaactacttggcagaaatt
gaggatcatttaaatgtcacaattcaacaagtcgatgcagatataaaggttccattaaat
gatttcgacggaaaagttgtatacggagaaaagaaagcagccatgggttcaaattaccaa
aatcatgtacagcaaatggcgccctacgtgaacgaattatcttctttggaatcaaaaaca
caacttttatatttgaagaggcatctggtaaaaacgagttaa
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