Bombus pascuorum (common carder bee): 132910667
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Entry
132910667 CDS
T09597
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
bpas
Bombus pascuorum (common carder bee)
Pathway
bpas03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
132910667
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpas03021
]
132910667
03036 Chromosome and associated proteins [BR:
bpas03036
]
132910667
Transcription machinery [BR:
bpas03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
132910667
Coactivators
SAGA/TFTC/STAGA complex
132910667
Chromosome and associated proteins [BR:
bpas03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
132910667
STAGA complex
132910667
TFTC complex
132910667
SAGA complex
132910667
SLIK complex
132910667
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
TFIID_NTD2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WDR55
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_Nup120_160
WD40_like
Beta-prop_DCAF12
Beta-prop_DCAF4
Cytochrom_D1
RMC1_N
Beta-prop_ELP1_1st
Beta-prop_WDR75_2nd
Mala_s_1-like
Beta-prop_WDR35_TULP_N
CTLH
DUF5888
DUF7165
Motif
Other DBs
NCBI-GeneID:
132910667
NCBI-ProteinID:
XP_060822496
LinkDB
All DBs
Position
9:10159190..10162245
Genome browser
AA seq
589 aa
AA seq
DB search
MKRLKSELINATIESYLKRRHYQTSDIFCKGNQIHCRTSDEMTLNATAASATSQDNSIIF
SAISIDVTAADQAYQRLKMWVNIVLDDKLKMELKGLLYPVFCHLYLEMLHTGNRQAAIQF
LKSHQNEFNSETEKDFLEELSSVFSVQDIELRPLVNSFRTRKYKVDMSDVAHLCLQQFLS
KHGHIILMQIINTHVTIIKKVDVPETDTEGCEDVNIRSEVGINGYVEQPSGTGADREMRE
LQEAIRLIRNNAHQPLRIFAVNNAVENASSGVIPPNMDKLAVGFSTTEIRLWGINETVLI
KPKYEEPPFTFASDIPFLHKFYDTSDRMTEGGAVILRGHTDIVHDLRFIPESDILLSVSS
DKDMRAWRLNDYTCAAIYSGHNYPIWCMDLSVFNLYVATGSHDRTAKLWSLDRIFPLRIF
AGHFLDINCVKFHPNARYLATGSADKTVRLWDKDDGNLLRVYIGAQSTIYSLAFSPDGKY
LAAAGDDKSISIWDLATNALLTELKGHEDTIMNLDWSCDGQYIASGSLDGTIRLWPTHDY
IKIVNSNSSSLVPETESPQIFSTYCSSILSLRYYNKNNSLVCIGTMDNL
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtttgaagagtgaattaattaatgctacaattgaatcatatttaaaacgacgt
cattatcagactagcgacattttttgtaaaggcaatcaaatacattgccgaacaagtgat
gaaatgactctgaatgcaactgctgcttctgccacttcccaagacaattcaattattttt
agtgccattagcattgatgttactgccgcagatcaagcgtatcaacggttgaagatgtgg
gtaaatattgtactcgatgataaattaaaaatggaattaaaagggcttctataccctgta
ttttgtcacttgtatttagagatgctacatactggtaacaggcaagcagcaattcaattt
ctaaaatcacatcaaaatgaattcaacagtgaaacagagaaagattttttagaagaacta
tccagtgtgttttcagtgcaagatattgaattaagacctttagttaattcatttagaact
agaaaatataaagtggatatgtcagatgttgctcacttatgtcttcaacaatttctttca
aaacatggtcatataatattaatgcagataataaacactcatgtaacaataattaagaaa
gtggatgtgcctgaaacagacacagaaggatgtgaagatgtaaatatacgttctgaggtg
gggatcaatggatatgtagaacaaccatcaggtactggagctgaccgtgaaatgagagaa
ttacaagaggctataagattaattcgaaataatgctcatcaacctctacgaatatttgca
gtaaataatgctgttgaaaatgcaagtagtggtgtcattccacccaatatggacaaatta
gcagtaggatttagtactacagagattaggctgtggggtataaatgaaacagtattaatt
aagccaaagtatgaagaacctcccttcacatttgcgtctgatattccatttttacataaa
ttttacgatacgtcagatagaatgactgaaggaggggcagtgatacttagaggacataca
gatattgtacatgatttaaggtttattccagaatcggatatattactttctgtatctagt
gataaagatatgagggcatggagacttaatgattacacatgtgccgcaatttatagtggt
cataattatcctatatggtgtatggatcttagtgtatttaatctatatgtagcaactggt
tctcatgacagaactgccaaattatggtctttagataggatatttccattacgtatattt
gccggtcactttttagatataaattgtgtcaaatttcacccaaacgctcgatatttagcg
actgggtctgctgataagactgtgagattatgggataaggacgacggaaatttattaagg
gtatatataggcgcgcagtcaacgatttatagtttagcttttagtccagatgggaaatat
ttggcagctgcaggcgatgacaaatctatttctatttgggatttagcaactaacgcattg
ttaactgaacttaaaggtcacgaagacacgattatgaatttagactggagttgtgatggt
caatacattgctagtggaagtttggatggcactattcgtttatggcctacacatgattat
attaaaattgttaatagcaattcatcaagtctagtacctgaaacagaatcaccacaaata
ttctcaacttattgctcgagcatcctttctttacgttattacaataaaaataattcgctc
gtgtgcattggaacaatggacaatttgtaa
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