Bombus pascuorum (common carder bee): 132910917
Help
Entry
132910917 CDS
T09597
Name
(RefSeq) nuclear RNA export factor 1-like
KO
K14284
nuclear RNA export factor
Organism
bpas
Bombus pascuorum (common carder bee)
Pathway
bpas03008
Ribosome biogenesis in eukaryotes
bpas03013
Nucleocytoplasmic transport
bpas03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132910917
03015 mRNA surveillance pathway
132910917
03008 Ribosome biogenesis in eukaryotes
132910917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpas03019
]
132910917
03009 Ribosome biogenesis [BR:
bpas03009
]
132910917
Messenger RNA biogenesis [BR:
bpas03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
132910917
mRNA cycle factors
Stress granule specific factors
132910917
Ribosome biogenesis [BR:
bpas03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
132910917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NXF_NTF2
LRR_NXF1-5
Tap-RNA_bind
TAP_C
LRR_8
NTF2
LRR_4
LRR_9
Motif
Other DBs
NCBI-GeneID:
132910917
NCBI-ProteinID:
XP_060823094
LinkDB
All DBs
Position
9:complement(4651800..4655424)
Genome browser
AA seq
644 aa
AA seq
DB search
MPKRAYEPQRAGLDGRYENFNDKRYFEHDDRAPRNDRGSYLSNRPRVSFKTQARPTRDVP
RSLALACLDEDVQMATSSNNNNNNNNNRQVIMTGRNRRTQRGRNSPVPHTRHRTSLVPKP
RRFPMGETNWYKITIPYGQKYDKDYIINNLLSHIAPETFVPIMYRVFGTKANFYVDDEKI
AVALFDCHRKITITDEYKLLVRVSKSSFPRCEIDDKLKERLKQAMAKRFVHATNALDLSR
FHRDPDLVSDYFCALFQPAILKAVLDIVSEYIPDLEALNLDGNKLQTIQDLNILDRKFLK
LKILYIGDNKIKDINQLDIIKDLKLEELKLAGNPICNQYKSRQYDYISDVRTRFPKLLRL
DGMDLPKPILFDVVDVGNIPPSQRTFVANAKAQEIVSQFLQQYFLIFDSENRQPLLDAYV
EHACFSMTVSYPPHYTNKLNGYLMENKYLKDDRNLYRTNDTNDRQKLLKYGRLPVVSFIS
ELPPTSHYLNTFTMDINLVTDGMMLITITGLFKELDKKEQPIRYFNRTFTMVPKGNGCCI
QNEQLHISQPTETQLKQLSDQQQAQMTNPESQTPSISDDAKSLTVQLPEDVKQQMTMTLS
QQTNMNLEWSLKCLEELSWNYDNALSAFQEFYKLGQVPAEAFNK
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaaagagcatatgaaccacaacgtgctggcctagatggaagatacgaaaatttc
aacgataaacgctattttgagcacgatgaccgtgcacccaggaatgacagaggttcatat
cttagcaataggcctagagtatcgttcaaaacacaagcaagaccaacaagggatgtgcct
agaagtctagcattagcatgcttagatgaagatgtacaaatggcaacaagttctaataat
aataataataataataataataggcaagttattatgacaggaagaaatagaaggacgcaa
cgtggaagaaatagtcctgtgcctcatacaagacacaggactagtttggttcctaaacct
aggagatttcctatgggagaaactaattggtataaaattactataccatatggacagaaa
tacgataaagattatataataaataatcttcttagtcatatagcaccggaaacttttgtt
ccaataatgtatcgagtttttggaactaaagccaatttttacgtggatgatgagaaaata
gcagttgcgttatttgactgtcatcgtaaaattacaattactgatgaatacaaattatta
gtaagagtctcaaaatcatcgtttcctcgatgtgaaattgatgacaaattgaaagaaaga
ttgaaacaagccatggctaaacgatttgtgcatgctacaaatgcactagacttgtcaagg
tttcacagagatccagatcttgtttccgactacttttgtgcgctattccaacctgcaata
ttaaaagcagtgttagacattgtatcagaatacataccagatttagaggcattaaatttg
gatggaaataagttgcagacaatccaagatttaaatattctggatagaaaatttttaaag
ttgaagatattgtatattggagataacaagataaaagatattaatcaattggatattatc
aaagatctgaaattggaggagctcaaattggcagggaaccctatatgcaaccagtataaa
tctcgacaatatgactacattagtgacgtgcgcacgaggttccccaaactccttcgactg
gatggtatggatctcccaaagccaatcctattcgatgtggtggacgtaggaaacataccc
ccttctcagaggacgtttgttgcaaatgcaaaagcacaagaaattgttagtcaatttcta
cagcaatactttcttatatttgatagtgagaatcgccaaccattgctagatgcgtatgtc
gaacatgcgtgttttagcatgaccgtgtcttatcctcctcactatactaacaaattaaat
ggatacctaatggaaaacaagtacctaaaggacgacagaaacctgtacagaacaaacgat
acaaacgataggcagaagttattaaaatatggtcgtttgcccgtagtttcatttatttcc
gaactgccaccaacttctcactatctgaatacattcacaatggacatcaacctggttacg
gatggaatgatgttgattacaatcactggactgttcaaagagcttgacaagaaagaacaa
cctattcgatactttaatcgaacctttacaatggtaccgaaaggaaatggttgctgtatt
caaaatgaacaactacatataagtcaaccgacagagacacaattaaaacagttgagtgat
caacaacaagcgcaaatgacaaatccagaatcacagactccttcaattagcgacgatgca
aaatcattaacggttcagttacccgaagacgtaaaacaacaaatgacgatgactctcagt
caacaaacaaacatgaacttggaatggagtttaaaatgtttagaagaactatcatggaat
tatgacaatgcgctttcagcgtttcaagaattttacaaactgggacaagtaccagcggaa
gcatttaataaataa
DBGET
integrated database retrieval system
