Bombus pascuorum (common carder bee): 132911013
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Entry
132911013 CDS
T09597
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
bpas
Bombus pascuorum (common carder bee)
Pathway
bpas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132911013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpas03019
]
132911013
Messenger RNA biogenesis [BR:
bpas03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
132911013
mRNA degradation factors
5'-3' decay
Decapping complex
132911013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
ELFV_dehydrog_N
Motif
Other DBs
NCBI-GeneID:
132911013
NCBI-ProteinID:
XP_060823283
EnsemblRapid:
ENSBPAG00000014360
LinkDB
All DBs
Position
9:16433378..16437722
Genome browser
AA seq
1079 aa
AA seq
DB search
MKMIKTGEDNLNLQYQQTVEFTGQENQHSVELYSSNVIVIPSPGGHNHGSSKVKLKNIVD
FTWEHNFYPGQLLAVHMSGKYLAYGIKVGNGGGVVRVVYKELEQRALLRGMRAAIQDLAF
AHVSNAILACVDYLGNLFIHTIESTPSELLCSLLLQVDADDISPTSHRVIWCPYIPEDVP
SDGDKVSKLLVLTRGSKVELWSVNTVSARFRSIEAIDPAVKENGGMLEIDQHSDTIIEAT
FSPDGTALATASFDGEVKFFQVYLHSNSHGNQVQPRCLHQWRPHGGRPISCLFFLDDHKT
YHPEVQFWRFAITGCDNNTELKVWSCEVWSCLQTIKFAPTPSTGKLPVLKAGLDLSAGYL
LLSDIYNKVLYILNLSKDNDEITSVNTISEFLLPYPILSFGIVDAGLRKLRPTGESLEDL
CPCEEDTEEQLVIKMYLVQPKSLQECHIAFKPASQVSGNCLMDTLTHKSLGYSEDSRDMG
NVNHNGISVENCEENRSLSATLEATTNHNAGLNLMTPDAFSSPAKKENNELDSRPSSPEL
GKVLSASPSLAQAVQALNATDPPLATNELEEQAPASCGSSPSREVREILSLTKADEEPEP
ENKPQDTNTADEDWPNIPMVLLKDVSRHAMQEADGFTNDEEKRKRLKDESKPTTHTTGNT
ENTWQTTNELNTLELINKIESILEIIQDQRQELRELSTEVTRLRQETPISTRVESALARA
SQQLNATLEQTLYSQMARQHDFLKTLETTMKDKIETTLPRIIEDTVEPLKHQLRLDSARM
DELLKKNLTELINSNHIKDTLAMAAVNAAKPALDSAFKETFTNVLLPGIEKACQTMFKQV
QDAFVRGTREYLQNVDAIADKQYQQRNEQQSEALSALVREELQTELNRGLIILQEGTIRT
IRDSIRDNLNQQLTEITNARSRATTPAIPVSAVADAQARVISLLQRGQLNAAFQQALSAS
DLGLVVLVCEKTEPSRVFSSVGPQGQTSRCILQQPVILSLVQQLSADLGHRTELKHRWLE
EAILNLDPNDPVTREHMGTVLMTLQSQLAAFVAANPSHNSIRRMKMLAMAARALFNQQP
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgatcaaaacgggagaggataacctaaatcttcaatatcagcaaacagtagaa
ttcactggacaagaaaatcaacattctgttgaattatatagtagcaatgttattgttatt
ccttcaccaggaggtcataatcacggtagttcaaaggtgaagttaaaaaatattgttgat
tttacatgggagcataacttttacccaggtcaattattagctgttcatatgtctgggaaa
tacttagcttatggcataaaagttggtaatggaggaggtgtggttagagttgtatacaaa
gaattggaacaaagagctctgttaagaggaatgcgtgcagcaatacaagatctggctttt
gcacatgtttctaatgcaattttggcatgtgttgattatttgggaaatctttttatacat
accattgaatcaacaccatcagaattgttatgtagtttattgctacaagtagatgcagac
gatatatctcctactagtcatcgtgtgatatggtgtccatatattcctgaagatgtacca
tcagatggagataaagtttcaaagcttttagttctaactcgtggttccaaagtagagttg
tggtcagttaatactgtttcggcaagattcagatcaatagaggcaattgatccagctgtg
aaggaaaatggaggcatgttggaaattgatcaacattctgacacaatcatagaagcaaca
ttcagtccagatggcacagccttagctacagccagttttgacggagaagtcaaattcttt
caagtttacttacatagtaattctcatggtaatcaagtacaacctcgttgtttacatcaa
tggagaccacatggtggacgaccaatttcctgcttgttctttctagatgaccataaaaca
taccatccagaagttcagttctggaggtttgccataactggatgtgacaataacacagaa
ttaaaagtttggtcttgtgaggtatggtcctgtttacaaactattaaatttgcacctaca
ccttctactggtaaattaccagtgttaaaagctggcttagatcttagtgcaggatacctt
ttattatcagatatatacaataaagttctgtatatattaaatctttcaaaagataatgat
gaaataacatcagtaaatacaatatcagagttcctcctcccatatccaatattgagtttt
ggaattgttgatgctggcttacgtaaactgcgtcctactggagaatcgctagaagattta
tgtccttgtgaagaagatactgaagagcaacttgttataaagatgtatctagttcaacca
aagtcattacaagaatgtcatattgcttttaaacctgcctcacaagtgagtggtaactgc
cttatggacacactaactcataaatcactgggctactctgaagactcacgagatatggga
aatgttaatcataatggaatttcagtggaaaattgcgaagaaaatcgttccttatctgct
acacttgaggcaacaacaaatcataatgctggcttaaatttaatgacaccagatgcattc
agctcgcctgccaaaaaagaaaataatgaattagattctcgccctagtagcccagaatta
ggtaaagtgttatctgctagtccctcgcttgcacaagcagttcaggctctaaatgcaaca
gatccaccattagccacaaatgagttagaagaacaagcacctgctagttgtggtagtagt
ccatcgagagaagtaagagaaattttatctcttacaaaagcagatgaagaaccagaaccc
gaaaataagccacaagataccaatactgctgatgaagattggcctaatatcccgatggta
ttattaaaagatgtaagcagacatgccatgcaggaagccgatggattcacaaatgacgaa
gaaaaaagaaaaagattaaaagacgaatcgaaaccaacaacgcatactacaggaaatact
gaaaatacatggcaaacaacaaatgaattgaatactctcgaactaataaataaaatagag
tcaattttggaaataattcaagatcaacgacaggaattaagagagttaagtactgaagtg
actagattaaggcaagagacaccaatttcgacgcgagtagaatctgctttagcacgagct
tcacagcaactaaatgcaaccttggaacaaacattatatagccaaatggctcggcaacac
gattttcttaaaacacttgaaacaacaatgaaagacaaaattgaaactaccttaccacgt
attattgaagatacagtagagccattaaagcatcaacttagattagattctgctcgaatg
gatgaactcttaaaaaagaatttgacagagctcattaatagtaatcatataaaagataca
cttgctatggcagcagtgaatgcagcaaaaccagcattagactcagcatttaaagaaacc
tttacaaatgttcttttacctggcatagaaaaagcatgtcaaacaatgtttaaacaagta
caagatgcttttgttaggggtactcgtgaatatcttcaaaatgtggatgcaattgcagat
aaacaatatcagcaaagaaatgaacaacaaagtgaagcgctatccgcattagttcgcgaa
gagttacaaacagaattaaatagaggtttaattattctccaagaaggaacaatacgtaca
attcgtgattccattagagataatttaaaccaacaacttactgagatcacaaatgcacgt
tctcgagctactacacctgctataccagtatcagcagttgctgatgctcaagcgcgagtt
atatctctcctccaacgaggacagttaaatgctgccttccaacaagctctaagtgctagt
gatttaggcttggtagtactagtttgtgaaaaaacagaaccttctagagtattttcttct
gtaggacctcaaggtcaaacctcaagatgtattttacaacaacctgtaattctttcactt
gtacagcagttatccgcagatttaggacaccgtacagaactgaagcataggtggcttgaa
gaggcgatattaaatttagatcctaatgatccagtaacacgagaacatatgggtactgtg
ttaatgactttgcaatctcagttagctgcttttgtagcagctaatccaagtcataattct
atacggcgtatgaaaatgttagctatggctgcccgtgcactttttaatcaacaaccttga
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integrated database retrieval system
