Bombus pascuorum (common carder bee): 132911014
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Entry
132911014 CDS
T09597
Name
(RefSeq) DNA mismatch repair protein Msh2 isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
bpas
Bombus pascuorum (common carder bee)
Pathway
bpas03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
132911014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpas03400
]
132911014
DNA repair and recombination proteins [BR:
bpas03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
132911014
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
RSS_P20
AAA_27
Pro-kuma_activ
Motif
Other DBs
NCBI-GeneID:
132911014
NCBI-ProteinID:
XP_060823284
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All DBs
Position
9:17035381..17047272
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AA seq
921 aa
AA seq
DB search
MAVQPNQQFNMDPPSQQSFVRFFKNLPEKLNTTIRFFNRSDYYTLHGNDALFAAQEVFKT
TSVCKMIGAEPYKTEGVILNKNHFESFIRDLLLVKQYRVEVYINQGSAKNQNWVLEYKGS
PGNLTQFEDTLFGNNDVAVSVHVIAVKLGIEAKSRIVGLSCVDTTATSFSVSEFQDNESF
SNLESLVVTLAPKECLLIQGEGSYEFQTLKQVMERNNVMVTTRKRSEFSSESVIQDLNTL
IKFKKGQQQNAQSLPEVNLSFAMSATSALIKYLDLTSDEGNLNQFAIDQIKESRYLKLDS
AAIKALNIESRVDTSSILNGNAPASILGILDKCRTSQGHRLLAQWIRQPLKDLCLIKERH
DIVETLVNDNELRTNLSEDHLRRIPDLQVLAKKLARKKSTLQDLYKIYMCISHLPRLLEQ
LSNINVIALKTMFSDPLSELIKDMDKFQQMVEQTIDLDSAEKGDFLVRAEFDDELKELKN
TMDEVEAKLQSQLGKVANDLSIEAGKTLKLESNQQLGYYFRVTLKEEKVLRNKKQYIILD
SNKSGVRFRSNKLNDLNDEYIVARDKYTVEQKKVVTEIIEIAAGYSSTIKTIGNVLASLD
VLTAFASVAVSANKPYVRPEMLPTEAGEFNLTQVRHPCLEIQEGVDFIANDISFKRGECH
FRIITGPNMGGKSTYIRSAGVSALMAHIGSFVPCDQARISLLDCILARVGADDSQLKGLS
TFMMEMIETAAILKTATCNSLVLIDELGRGTSTYEGCGIAWSIAEYLAKEIKCYCLFATH
FHEITKLEEEVSAVKNQHVTALVDDNKLTLLYKVKPGICDQSFGIHVAKMANFPQDVIEF
AKRKQAELEDYQDSVFEGSDNPQKKKDIIKEAEILIAEFISKCRNLDKSLSDADLEDRIS
IFKKEVLSHENPYIKTLLAAS
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggctgtccaaccaaatcaacaatttaatatggatccaccaagtcaacagagttttgtc
agattttttaaaaatctacctgaaaaacttaataccactatacgattttttaatagatca
gattattatacattacatggtaatgatgctttatttgctgcacaagaagtttttaaaact
acgtcagtttgtaagatgataggagctgagccatataaaaccgagggtgttattcttaac
aaaaatcattttgaatcttttatacgtgatctactgttagtaaaacaatatagagtagaa
gtttatattaatcaaggatcagcaaaaaatcaaaattgggtattagaatataaaggttct
cctggaaatttaacacaatttgaagatacattgtttggcaataatgatgttgctgttagt
gtacatgtcatagcagtgaaattaggaatagaggcaaaatctagaattgttggtttaagc
tgtgtagatactacagcaacttcattttctgtttctgaatttcaagacaatgaatcattt
tccaatttggaatcactggttgttacacttgctcccaaagaatgtttattaattcaaggt
gaaggcagctatgaatttcaaactcttaaacaagtcatggaacgaaataatgtaatggtt
actacaagaaaaagaagtgaattttctagtgaatcagttatacaagatctaaatacttta
ataaaattcaagaaaggtcaacaacaaaatgcacagtctttacctgaagtcaatttaagc
tttgctatgtcagctacttctgcgcttattaaatatttagatttaacatcagatgaagga
aatttaaatcaatttgctatagaccaaataaaggagtcacgttatttaaagcttgattca
gctgctataaaagctcttaatattgaatcacgtgttgatacctcttctattttaaatgga
aacgcacctgcaagtattttgggcattttggataaatgtaggacttcacaaggtcataga
ttgcttgcacaatggattagacaacctttaaaagatttatgtcttataaaggaaagacat
gatattgttgaaacactagtgaatgacaatgaattacgaactaatcttagtgaagatcat
ttaagacgcataccggatttgcaagtgcttgcaaaaaaattggccaggaaaaaatcaact
ttacaagacctttataagatttacatgtgtatatcacatttgcctagattattagaacag
ctttctaatataaacgtaatagccttaaaaacaatgttcagtgatcctttgagtgaactt
attaaagacatggacaaatttcaacaaatggttgaacaaacaattgatttagattccgcc
gaaaaaggagatttcttagtacgagccgaatttgatgatgaattgaaagaattaaaaaat
actatggacgaggtggaggcgaaattacaatctcaattgggtaaagttgctaatgatctt
tcaatcgaagctggaaaaactctaaaactagaatcaaatcaacaacttggatattatttt
cgtgtaacattgaaagaagaaaaagtactaagaaataagaaacagtatattattctggat
tctaacaaaagcggtgtacgatttcgcagcaataaattaaatgatttaaatgatgaatac
attgttgctagagataaatatacagtggaacaaaaaaaggttgttacagaaataattgaa
attgcagccggctacagtagtacaataaaaactattggaaatgtattggcatctcttgat
gtgcttactgcttttgcttctgttgctgtaagtgctaataaaccatatgtacgtcctgaa
atgctacctaccgaagccggtgagtttaatcttactcaagttcgacatccatgtttggaa
attcaagaaggagtagattttatagctaatgatatcagttttaaaagaggcgaatgtcat
tttcgcattataactggtccaaatatgggaggtaaaagcacctatataagatctgctggt
gtcagtgctttaatggcacatattggaagctttgttccttgcgatcaagcaagaatatca
ttattggattgtatattagcccgtgtaggagctgatgattctcaattaaaagggctttct
acatttatgatggaaatgatagaaactgctgccatattaaaaacagcaacttgtaattct
ctcgtgttaattgacgaattaggcagaggaacctctacttatgaaggttgcggtatagca
tggtcaatcgccgaatatttagcaaaagaaatcaaatgctactgtctttttgcgacacat
tttcatgaaataactaaattagaagaagaagtatctgccgttaaaaatcaacacgttaca
gcccttgtagacgataataaattaactttattatataaagtaaaacctggtatatgtgat
caaagttttggcatacatgtcgctaaaatggctaatttcccacaagatgttatagagttt
gctaagcgtaaacaagcagagcttgaagattaccaagactcagtttttgaaggttctgat
aatccacaaaaaaagaaagatattataaaggaagctgaaattcttattgcagaatttatt
agtaaatgcagaaatttagacaaatcattatctgatgcggatctagaagatagaatttca
atatttaaaaaagaagttctatctcacgaaaatccctacataaagacacttctagcagct
tcttaa
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