Bombus pascuorum (common carder bee): 132911223
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Entry
132911223 CDS
T09597
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
bpas
Bombus pascuorum (common carder bee)
Pathway
bpas03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132911223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bpas03041
]
132911223
Enzymes [BR:
bpas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
132911223
Spliceosome [BR:
bpas03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
132911223
Complex C
U4/U6.U5 tri-SnRNP related factors
132911223
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_22
AAA_19
nSTAND3
AAA_30
Flavi_DEAD
SLFN-g3_helicase
ResIII
T2SSE
Cas3-like_C_2
SecA_DEAD
TsaE
Motif
Other DBs
NCBI-GeneID:
132911223
NCBI-ProteinID:
XP_060823674
LinkDB
All DBs
Position
10:complement(10030918..10036364)
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AA seq
886 aa
AA seq
DB search
MSKYRKEESTSEDSDSEEERRKKDIKERDEFANRLKAKDESKIRKVAMPAGSGAAEAAKR
LKIMETDMREKLVPKLRVESRRKYLEKRKEDKVAELEADIIDDEYLFEDEILTERERKER
EHKKQLLQLAKEHEKARELERLQRYYMPLEKGKVAPELEVPDNEPPQSEQSKWESDQMSS
AVFRFGAKDRKAQQDYDLLLEDEVEFVQALRMPGSEKNRKREDSPPPQVKALQTIQETKR
SLPIYPFRNDLIQAIKDHQVLIIEGETGSGKTTQIPQYLYEAGFAENNKIIGCTQPRRVA
AMSVAARVAHEMAVKLGNEVGYAIRFEDCTSHRTRIKYMTDGTLHREFLSEPDLASYSVM
IIDEAHERTLHTDILFGLVKDITRFRTDLKLLISSATLDASKFSEFFDDAPIFRIPGRRF
PVDIYYTKAPEADYIDACVVSILQIHATQPPGDVLVFLTGQDEIETCQEMLQERVRRLGS
KLGELLILPVYANLPSDMQAKIFQPTPLGARKVVLATNIAETSLTIDNIVYVIDPGFAKQ
NNFNSRTGMESLMVVPISKASANQRAGRAGRVAPGKCFRLYTAWAYQHELEDNTVPEIQR
INLGNAVLTLKALGINDLVHFDFLDPPPHETLVLALEQLYALGALNHRGELTKLGRRMAE
FPLDPMMAKMLLASEQYRCSEEVATIAAMLSVNGAIFYRPKDKIIHADTARKNFHVPGGD
HLTLLNVYNQWQQSDFSTHWCYENFIQHRSMKRARDVREQLVGLMQRVEMELVSGITETL
NIRKAITAGYFYHVARLSKGGHYKTAKHNQTVSIHPNSSLFQELPRWLLYHELVFTTKEF
MRQVTEIESKWLLEVAPHYYKPKELEDSTNKKMPKVAGRSHPDGTY
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaatacagaaaagaggaatccacgagtgaggacagtgatagtgaggaggaaaga
cgtaagaaagatattaaagaaagagatgagtttgctaatcgactgaaagcaaaggatgaa
agtaaaatacgcaaggtggctatgccagccggttcaggagcagccgaggctgccaagaga
ctcaaaattatggaaacagatatgcgagagaaactggtaccaaaactgcgtgttgagtct
cgtaggaaatacttggagaaacgcaaagaggataaggtggctgaattggaagctgatata
atcgacgatgaatatctgttcgaagatgaaatattaacagaaagggaaaggaaagagcgg
gaacataaaaagcagttgcttcagttagccaaagaacatgagaaagccagagaacttgaa
aggttgcaacgttactatatgcctttggaaaagggaaaggtggcaccggaattagaagtt
cccgataacgaaccgccacaatccgagcaaagcaaatgggaatctgatcagatgtcttct
gctgtctttcgatttggcgcaaaagacagaaaagcacaacaggattatgatcttctgctg
gaggatgaagtggagttcgttcaagcgttacgtatgcctggcagtgagaagaacaggaaa
cgcgaggatagtcctcctccgcaagtaaaggcgttacaaactatacaggagacaaaaagg
agtttaccgatctatccctttagaaatgatctcattcaggcaatcaaagaccatcaggtg
ctgataatcgagggagaaacgggttcagggaaaactacgcaaattcctcaatacctatac
gaagctggattcgcagagaataataaaattatcggctgtacgcagccaagaagggtagct
gccatgtccgttgctgcgagagttgctcacgaaatggctgttaaattgggaaatgaagtg
ggttacgcgattcgtttcgaggattgcacctctcatcgcactcgtatcaaatacatgacc
gatggtaccctgcaccgtgaatttctcagcgaaccagatttagcttcttacagtgttatg
atcatcgacgaagcacacgagcgtaccttacatacggatatcttgtttggtttagtaaag
gatataacaaggtttcgaacagatttaaaactcctaatttcgtccgctacgttagatgct
tcgaaatttagtgaattcttcgacgatgcaccgatatttcggatacctggtcgccggttt
cccgttgatatttattataccaaagcaccagaagcggattacatcgacgcctgcgtagtc
tccattcttcaaatacacgccactcaaccacctggcgatgtactggtgtttctaacaggt
caagacgagatagaaacatgtcaggaaatgttgcaagaaagagtaaggcgactaggttcg
aaattaggagaactgttaattctacccgtatatgctaatcttccaagcgatatgcaagca
aaaatatttcaacccactccgcttggagcgagaaaagtagttcttgctacgaacatagca
gaaacatcattaacgatagacaacatagtgtacgtgatagaccctggattcgcgaaacag
aacaattttaattccagaacaggcatggaaagtttaatggttgtgccaattagcaaagct
tctgcgaatcagagagcaggcagagctggaagagtagcaccaggaaagtgttttcgactg
tacacagcttgggcttaccaacacgaactcgaagacaataccgtgcctgaaattcagagg
atcaatctaggaaatgccgtgctaaccctgaaagctctgggaataaacgatttagtccat
ttcgacttcctggatcctccgccgcatgaaacattggtcttagctttagaacagctgtac
gcgttgggagctttgaatcatcgcggagaattgacgaaactgggtcgaagaatggctgaa
tttccgctagatcctatgatggcgaagatgttgctggctagcgaacaatatcgctgctcg
gaggaagtagccacgatagctgccatgttatctgtgaacggggccatattctacaggcct
aaggacaagatcattcacgcagatacggctagaaagaatttccatgtgcctggtggcgat
catttgactttattgaacgtgtacaatcagtggcagcaaagtgattttagtactcattgg
tgttacgagaatttcattcaacatcgatcaatgaaaagggctagagatgttagggagcaa
ttagttggattgatgcagcgagtcgagatggaacttgtgtcgggtatcacggaaacgctg
aatatcaggaaggctatcacagcaggatatttctatcacgtggcaagattgtcaaaaggg
ggtcactataaaactgcaaaacataatcagacggtttccattcaccctaatagctcgttg
tttcaagagctgccacgttggttactttatcatgagttggttttcactacaaaggaattt
atgagacaagtgacagagatcgagagcaagtggcttttggaggtagcacctcattattac
aaaccaaaagaactggaagattctacgaataaaaaaatgccgaaagttgcaggacgatcg
cacccagacggaacctactaa
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