Bombus pascuorum (common carder bee): 132911306
Help
Entry
132911306 CDS
T09597
Name
(RefSeq) paired amphipathic helix protein Sin3b isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
bpas
Bombus pascuorum (common carder bee)
Pathway
bpas04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
132911306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bpas03036
]
132911306
Chromosome and associated proteins [BR:
bpas03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
132911306
REST complex
132911306
Heterochromatin formation proteins
Other heterochromatin formation proteins
132911306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
Motif
Other DBs
NCBI-GeneID:
132911306
NCBI-ProteinID:
XP_060823871
LinkDB
All DBs
Position
10:complement(6617442..6636747)
Genome browser
AA seq
1541 aa
AA seq
DB search
MKRVRGLDEVASPAAATLKHSSVSAGSGGGGSLEYHSSSGIGVVVPGQAVRSVASKEMPG
SIQFGTAQAQQQYTGAIVVPTAAPSPIKGSGSAGLTSTCSSSSVNTGGGLHGGIGGGSNH
SMGSQQPTPGTQSQVHSQQQPTIRHKVHSGNVTPLASTPPGTSLGGGSGSQQFQRLKVED
ALSYLDQVKYKFSDQPQVYNDFLDIMKEFKSQSIDTPGVITRVSHLFKGHPELIVGFNTF
LPPGYKIEVQANEQGYAFQVSVSMPSPTATHTCASLSQHHCTVNVGSPPVASPPTQPAKA
PPVLQIMQGGTNMHHSLANNISNNSLTVHAPSPPPVQAYNNSHVSAAQAQAVSQALSQAQ
DGIPTSGQTQQSQPVEFNHAINYVNKIKNRFQGQPDKYKRFLEILHTYQKEQRNLKESGH
MGGTSGSGASGGAKHLTEAEVYSQVAKLFENQEDLLAEFGQFLPDATNQQSSLSNKTATV
NDHTTIVKKPLGPKAPYNNSGNISRDLRESGGTGTIERENRDHRDRDRERDRSGIRDINS
VQKFGHNTGQLKRSPSFSPSVTAGNSHHIQHGPPLKKPKVSSMRECVTIAEAGKYGSLND
YAFFDKVRKALRSQEVYENFLRCLVLFNQEIVSKSELVQLVTPFLGRFPELLRWFKDFLG
HLPESSSTNTTNASSNLNVEALPNNVVRSHQERPQGDLAMEIDYTACKRLGASYCALPKS
YVQPKCTGRTQLCKEVLNDTWVSFPTWSEDSTFVTSRKTQYEEFIYRCEDERFELDGVIE
TNASTIRVLEGVHKKMSRMSQEELQKFKLDDCLGGCSPTIHQRALKRIYGDKAADIIDGL
KKNPVVAVPVVLRRLKSKEEEWREAQKGFNKLWREQNEKYYLKSLDHQGINFKQNDVKAL
RSKSLFNEIETLYDERHEQVDDGSGDGQNNSGPHLVLPYKDKSVLDDAANLLIHHVKRQT
AIHKEDKQRIKLLLKHFIPDLFFHPRQELSDDERDEDDEKEDLNVAACSNSQSVTMNTSP
LGGGGLQANRNKAPVSPIPSSTSIKVEPDIKVPIHAMSDDPEEAYTLFMGSNNWYLFLRL
HHILCERLTKMYDRALALAEEESRYKQQRKESTAVALRLKPKNEIEIEDYYPAFLDMVKN
VLDGNMESTAYEDTLREMFGIHAYIAFTLDKVVTYAVRQLQHLVSDLICQQCMELFQREQ
RQPKESSGAGGLCATAYMRLGAEMSYQRKAEKAMADENCFKIYIYKKDCKMTMELLDTEG
DEAMDNSCREREREGVTVSEKWSTYVERFSAPAGQTSPKDTPTLTDNEPTTNHPVSNDQA
ARGGRGRKRKNTDISKKMDGNGWSSLGRILAGRKPVFLYRNIRQWRKKAARMMSASVPST
NQPDKAAGSTDKEKSLDSVDAILKRPPGLRLADSGDTSDIINSDETQCRFNPNSYQMLYI
ASKEAFLYKQNSFSRARECHPSVTKHLNSKFHQWLSGWVSKNVADVQHRLCQDWLMGRYE
NLIPHKTRVITDNDQTRTPYRQYNRYRVERLQPDSLTEPSV
NT seq
4626 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtgttcgcgggctggacgaggtagcatcaccagcagcagcaacattaaagcac
tcgtcagtgagtgcaggaagtggcggaggaggtagtttggagtaccattcaagcagtgga
ataggcgttgttgtacctggccaagcagttcgatcagttgcttcgaaagaaatgccgggc
agcatacaatttggaactgcccaagctcaacagcaatatactggagcaattgtagtgccg
accgcggccccgtcccccattaagggaagtggatctgcaggactcacttctacatgtagc
agtagcagtgtaaatactggtggaggtttacacggtggaataggtggtgggagtaaccat
agtatgggttcccaacagcctacaccaggaacacaaagtcaggttcatagtcaacagcaa
ccaacaataaggcataaggttcattctggcaatgtaacaccattagcttctactccacca
ggcacaagcctaggtggcggcagtggttcccaacaatttcagagattgaaagtagaagat
gcgttatcttatttagatcaagtaaagtacaaattcagtgatcagcctcaggtgtataat
gatttcttggatattatgaaagaatttaagtctcaaagcatagatacaccaggagtaata
acaagagtaagccatttatttaaagggcaccctgaacttattgttggtttcaataccttt
cttccacctgggtataaaatagaggtgcaagcaaatgagcaaggatacgcatttcaagtg
tcagttagtatgccaagtccaacagcaacacacacttgcgctagcttatcacagcatcat
tgcactgtgaatgttggttcacctcctgttgcaagtccaccaacacaaccagcgaaagct
cctccagtattgcagataatgcaagggggcacaaacatgcaccactctctggcaaataat
atttcgaataatagcttgacagtacatgcaccttcgccaccaccggtacaggcatacaat
aattcacatgttagtgcagctcaagcgcaggctgtgagtcaagcattaagtcaagcacaa
gatggtatacccaccagtggacaaactcaacaaagccaaccagttgagtttaatcatgcg
attaattacgttaacaaaattaagaatcgattccaaggtcaaccagacaagtataaaaga
tttttagaaattctgcatacttatcagaaagagcagcgaaatttaaaagaatctggacac
atgggtggtacaagtggatctggtgcatctggtggggcaaaacatttaacggaagcagaa
gtttatagccaggttgccaagttatttgaaaatcaagaagatttgctggctgagtttgga
caatttttgccagatgctactaatcaacagagttcgttgagtaacaagactgctacagtt
aacgatcacacaacaattgtcaagaaaccattgggacctaaagcaccttataataattcg
ggaaatatttcaagagaccttcgtgaatcgggtggtactggtacaatagaacgcgaaaat
cgcgatcatagagatcgtgaccgagagcgagatagatctggtatacgagatattaatagc
gtacaaaaatttggtcacaatacgggacaattgaaaagaagtccatcgttttcaccttcg
gtaacagccggaaactctcaccatatacagcatggtccacctttgaaaaagcctaaagta
tcgtctatgcgtgaatgtgttactatagctgaagctggaaaatatggcagtctcaatgat
tatgctttcttcgataaggttcgtaaagcattgagatcgcaagaagtatacgaaaatttc
cttagatgcttggttttgtttaatcaagagatagtttctaaatctgagttggtgcagtta
gtgacgccatttcttggtcgttttcctgaactattgcggtggtttaaagatttcctgggc
cacttgcccgagtcttctagtaccaacacaacaaatgcaagtagcaatttaaatgttgaa
gcgctaccaaataatgttgtacgaagtcatcaagagagaccacaaggtgatctggcgatg
gaaattgactacacggcatgtaagcgtctaggggcatcatactgtgcgttaccaaagtct
tacgttcaaccaaagtgtacaggaagaacgcaactgtgtaaagaagttctcaatgataca
tgggtttcattcccgacttggtctgaagatagtacattcgtaacatccaggaaaactcag
tacgaggaattcatttatcgttgcgaagatgaacgatttgagttggatggtgtaatagaa
actaatgcgtcaacgatcagagttctcgagggtgtccataagaaaatgagtagaatgagc
caagaagaacttcaaaaattcaagctcgacgattgtctcggtggttgttcgcctacaatt
catcagagagccttgaagaggatatacggcgataaggcggctgacattatagatggtctt
aagaaaaatcctgtagtagctgtaccagtagtccttcgtcgattaaagagtaaggaagaa
gaatggcgggaagcacaaaaaggtttcaataaactctggagagaacaaaacgaaaaatac
tacttgaagtccctggatcatcaaggtatcaatttcaagcagaacgatgttaaggcccta
aggtccaagagcctatttaatgaaattgaaacgttatatgatgagagacacgagcaggta
gacgatggtagcggggatggtcaaaataatagcggtccacaccttgtattaccttacaaa
gataagtctgtcctagatgatgcagctaatcttcttatccatcatgtaaagcgtcaaacg
gccatccacaaggaagacaagcaacgaataaagcttttgttgaagcattttatacctgat
cttttcttccatccacgccaggaactaagtgacgacgaaagggatgaagacgatgagaag
gaagatctcaatgtagcagcatgtagtaattctcagtcggtaacgatgaatacctctccg
ttgggtggtggtggcctccaagcaaataggaataaggcgccggtatctccgattccgtct
tccacgtctattaaagtcgaacctgatatcaaagtaccgatccatgcgatgtcggatgat
cctgaagaagcgtacacgctcttcatgggcagcaacaattggtacctttttttaaggtta
catcatatattatgtgaaagattaacaaaaatgtacgaccgggctctggctcttgctgaa
gaggaatcacggtacaaacagcagcgtaaagagagcacagctgtcgcgttacggttaaaa
cctaaaaatgaaattgaaattgaagattactatccagcatttttggatatggttaagaat
gttctagacggtaatatggaaagtactgcatatgaggataccttacgagaaatgtttggt
attcacgcatatatcgcttttacgttagataaggttgtaacatacgctgtgagacaattg
cagcatttggtctcagatcttatatgccagcagtgtatggaattatttcagcgagaacaa
cgacaaccaaaagaaagtagtggtgcaggtggtttatgtgctacagcgtacatgagactc
ggtgcagaaatgtcgtatcagcgtaaagctgaaaaggctatggcggacgaaaattgtttt
aaaatatacatttataagaaagactgtaaaatgacaatggaattgttggatacggaaggt
gatgaagcgatggacaacagttgtagggaaagagaaagggaaggagttacggtatctgaa
aagtggtctacatatgttgagaggttttctgctccagctggtcagactagcccgaaagac
acccctaccttaacagacaatgagccaacaaccaatcatcctgtgagtaacgaccaggca
gcaaggggggggaggggcagaaagcgcaagaacactgacattagcaagaagatggatgga
aatggttggagttctttaggcagaatcttggcaggacgtaagcctgtatttctttaccgt
aatattagacagtggaggaaaaaagctgcaagaatgatgtcagcatcagtgcctagcacc
aatcaaccagataaagcagcaggatcaactgacaaagaaaaatcactggattctgtggat
gcgatcctaaagcgacctcctggtttaagattagcagattctggggatacatctgacatt
atcaattccgatgaaacccagtgtagatttaatcctaatagttaccaaatgctttatatt
gctagtaaggaagcattcctgtataaacaaaattctttcagtcgtgccagggagtgtcat
ccatctgttacaaagcacttgaattcaaagttccatcaatggctatcgggttgggtatcc
aagaatgtcgcggatgttcaacaccgattatgtcaggattggttgatgggacgttatgaa
aatttaattcctcataaaacacgagtgatcacggacaatgatcaaacgagaacgccttat
cgacaatacaatcgttatcgagtggaacgcttgcaacccgattctctgacagaaccaagt
gtataa
DBGET
integrated database retrieval system
