Bombus pascuorum (common carder bee): 132911461
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Entry
132911461 CDS
T09597
Name
(RefSeq) transcription factor Sox-2 isoform X1
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
bpas
Bombus pascuorum (common carder bee)
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bpas03000
]
132911461
Transcription factors [BR:
bpas03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
132911461
BRITE hierarchy
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GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
CEP19
CSRNP_N
Motif
Other DBs
NCBI-GeneID:
132911461
NCBI-ProteinID:
XP_060824078
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Position
10:complement(10250289..10610827)
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AA seq
502 aa
AA seq
DB search
MLTMESDLKGGSLHGQIPPHPHQGVSPMGHHTGVSPYGTLGSIVHSPALSGSPPNTGSLT
LGLQHHHQTPQHHYASMQAAQQQQQQNMHSLAQQNAAQQQQQHHPHQQQQQQQPPPPQQH
HQPPNNNNNTSKNNNIDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLL
SETEKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLLKKDKFPLGSGVAGVGGMLGVDQ
RQVGATGGPQQAQLPRDVYQMPNGYMPNGYMIHDPATAYQQHVAYGGHMGGAAAAAASAA
GYPRYDMGHHMGGGSPSPINSYMNGYGYGGGSNSVPGGSPSPYHQPQPGSQMSSHSPSGS
SIKSEPTSPASGGIHTPPTGASSSGAVGGQVVKREYMGQQQSQQAQGDLRQMISMYLPQG
VEQGVVQHGAGVYSPGPSPDPLAQHHSAIAPLGHMAESDRKMLNPDTGCYSESVRAWYRY
MWKRYGDQHPNISSWDSYYSEK
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgatggagtcggacctgaaaggcggcagcctgcacggtcaaatacctcctcat
ccgcatcagggagtctccccgatgggacatcataccggtgtatctccgtatggtaccctt
ggatccattgttcacagtccggcattatctggaagtcctccgaatactggaagtctgact
ttaggtttacaacatcatcaccaaacaccgcagcatcattacgcgtcgatgcaggccgcg
caacaacaacagcaacaaaatatgcattcgctggcacagcaaaacgctgctcaacaacag
caacaacatcatccgcatcaacaacagcagcaacagcaaccaccaccgccccaacaacat
catcagccaccaaataacaataataataccagtaagaacaacaacatcgaccgcgtgaaa
aggccgatgaatgcgtttatggtgtggtctcgtggtcaacggcgtaagatggcacaagaa
aatccaaagatgcacaactctgaaatttcaaagcgattgggtgcggaatggaaactgctt
agcgaaacggaaaagcgccctttcatcgatgaagcaaaacgattacgcgcggtacacatg
aaagagcatcccgactacaaatacagaccgcgacgtaaaacaaaaactttgctgaagaaa
gataaattcccacttggaagcggagtagccggcgtcggaggtatgctgggcgtagatcag
cggcaagtcggcgctaccggtggaccgcagcaagcacaactgccccgtgacgtttatcaa
atgccaaacggttatatgcctaatggatacatgatacatgatccagcaaccgcatatcaa
caacacgttgcatatggtggtcacatgggaggcgcagccgctgctgccgcttctgctgct
ggctatcccaggtacgatatgggccatcacatgggcggtggcagtccaagtcccataaat
agctacatgaacggttacggttacggtggtggaagtaacagcgtaccaggtggatcgccg
tcaccataccatcaaccgcaaccgggatcgcaaatgtccagtcatagtcctagcggtagt
agcataaaatctgagcctacaagtccagcgagcggcggaattcatacgccaccaacagga
gcatcttcgtcaggcgcagtcggaggacaagttgtaaaacgagagtacatgggccaacaa
cagtctcagcaggcgcagggtgacctcaggcaaatgatctcgatgtatctgccccagggt
gtcgagcaaggagtcgtccagcacggcgccggtgtctattcacccggtccatcaccggat
ccgcttgcccagcaccattccgcaattgcaccgctcggtcacatggcagagagtgaccgt
aaaatgttgaatccagacaccggctgttactcggagtccgttcgggcatggtaccgatac
atgtggaaaaggtacggggatcaacatccaaacatctcttcctgggattcctactattcg
gagaaataa
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