Bombus pascuorum (common carder bee): 132911779
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Entry
132911779 CDS
T09597
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
bpas
Bombus pascuorum (common carder bee)
Pathway
bpas03018
RNA degradation
bpas03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132911779
09123 Folding, sorting and degradation
03018 RNA degradation
132911779
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpas03019
]
132911779
03041 Spliceosome [BR:
bpas03041
]
132911779
Messenger RNA biogenesis [BR:
bpas03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
132911779
mRNA degradation factors
5'-3' decay
Lsm complex
132911779
Spliceosome [BR:
bpas03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
132911779
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
DUF1820
Motif
Other DBs
NCBI-GeneID:
132911779
NCBI-ProteinID:
XP_060824687
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All DBs
Position
11:complement(6850343..6851904)
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AA seq
96 aa
AA seq
DB search
MASGLESYVNHTVSIITSDGRNFIGTLKGFDQTINIILDESHERVYSTTQGVEQVVLGLH
IIRGDNVAIVGELDDEMDARLDLSAIRADPLSSIVH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaggtttagaaagctacgtaaatcacactgtttctattattacttctgatggc
agaaatttcatcggaacattaaagggatttgatcaaactattaatataatattagatgaa
tctcatgaacgtgtgtacagtacaacgcaaggtgtagagcaagtagtattaggtttacat
atcatcagaggtgacaatgtggctattgtaggagaattggatgacgagatggatgcacgt
ttagatctatcagctataagagctgatcctttaagttctattgtacattga
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