KEGG   Bombus pascuorum (common carder bee): 132912392
Entry
132912392         CDS       T09597                                 
Name
(RefSeq) exosome complex component RRP46
  KO
K12590  exosome complex component RRP46
Organism
bpas  Bombus pascuorum (common carder bee)
Pathway
bpas03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bpas00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    132912392
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bpas03019]
    132912392
Messenger RNA biogenesis [BR:bpas03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     132912392
SSDB
Motif
Pfam: RNase_PH RNase_PH_C DUF2112
Other DBs
NCBI-GeneID: 132912392
NCBI-ProteinID: XP_060825752
EnsemblRapid: ENSBPAG00000003742
LinkDB
Position
12:1578931..1580107
AA seq 220 aa
MSEETPEGEFRLRPMNCELNQLSMPDGSAMLMQGNTAVVAGIYGPIEAKPQKMMYDKASV
EVSYSPIKGPAKVDDRMTEMYIKETCEAAIIVTFHPATAVCINVQELEDSGGILACTINA
ACLALINAGIPMKFTIAAVNCMIQEGTENIILDPDSTQLQEARAEFTFAFDSMKKDVICC
DTVGCFTETEFLEAMEKCKQVSQYVFDFYRNLVKKYANVI
NT seq 663 nt   +upstreamnt  +downstreamnt
atgtctgaagaaacgccggaaggtgaatttagattacgacctatgaattgtgaattaaac
caactttcaatgcctgatggatcggcaatgctaatgcaaggaaatactgctgtagttgct
ggaatatatggaccgatagaagcaaaaccacaaaaaatgatgtatgataaagcatcagtt
gaagtatcatacagtcctatcaaaggtccagcaaaggtggatgacagaatgacagaaatg
tatatcaaggaaacttgtgaagctgcaataattgttactttccatccagcaactgctgta
tgcattaatgtacaagaattggaagattctggtgggatattagcctgtacaataaatgca
gcatgcttggcacttattaatgctggtattccaatgaaatttactattgcagcagtgaat
tgtatgatacaggaaggcactgaaaatattatactagatcctgatagtactcaattacag
gaagctagagcagaatttacatttgcatttgatagtatgaaaaaagatgttatatgttgt
gatactgttggttgttttacggagacagaatttttggaagcaatggaaaaatgtaaacaa
gttagtcaatatgtatttgatttctatagaaatcttgtaaaaaagtatgcaaatgtgata
taa

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