Bombus pascuorum (common carder bee): 132912392
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Entry
132912392 CDS
T09597
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
bpas
Bombus pascuorum (common carder bee)
Pathway
bpas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132912392
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpas03019
]
132912392
Messenger RNA biogenesis [BR:
bpas03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
132912392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
DUF2112
Motif
Other DBs
NCBI-GeneID:
132912392
NCBI-ProteinID:
XP_060825752
EnsemblRapid:
ENSBPAG00000003742
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All DBs
Position
12:1578931..1580107
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AA seq
220 aa
AA seq
DB search
MSEETPEGEFRLRPMNCELNQLSMPDGSAMLMQGNTAVVAGIYGPIEAKPQKMMYDKASV
EVSYSPIKGPAKVDDRMTEMYIKETCEAAIIVTFHPATAVCINVQELEDSGGILACTINA
ACLALINAGIPMKFTIAAVNCMIQEGTENIILDPDSTQLQEARAEFTFAFDSMKKDVICC
DTVGCFTETEFLEAMEKCKQVSQYVFDFYRNLVKKYANVI
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagaaacgccggaaggtgaatttagattacgacctatgaattgtgaattaaac
caactttcaatgcctgatggatcggcaatgctaatgcaaggaaatactgctgtagttgct
ggaatatatggaccgatagaagcaaaaccacaaaaaatgatgtatgataaagcatcagtt
gaagtatcatacagtcctatcaaaggtccagcaaaggtggatgacagaatgacagaaatg
tatatcaaggaaacttgtgaagctgcaataattgttactttccatccagcaactgctgta
tgcattaatgtacaagaattggaagattctggtgggatattagcctgtacaataaatgca
gcatgcttggcacttattaatgctggtattccaatgaaatttactattgcagcagtgaat
tgtatgatacaggaaggcactgaaaatattatactagatcctgatagtactcaattacag
gaagctagagcagaatttacatttgcatttgatagtatgaaaaaagatgttatatgttgt
gatactgttggttgttttacggagacagaatttttggaagcaatggaaaaatgtaaacaa
gttagtcaatatgtatttgatttctatagaaatcttgtaaaaaagtatgcaaatgtgata
taa
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