Bombus pascuorum (common carder bee): 132912770
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Entry
132912770 CDS
T09597
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
bpas
Bombus pascuorum (common carder bee)
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bpas03041
]
132912770
Spliceosome [BR:
bpas03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
132912770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
ARM_TT21_5th
TPR_6
TPR_11
PPTA
NRDE-2
HAT
Motif
Other DBs
NCBI-GeneID:
132912770
NCBI-ProteinID:
XP_060826470
LinkDB
All DBs
Position
12:6014894..6020692
Genome browser
AA seq
1040 aa
AA seq
DB search
MSSASGDESEITLNEPVRRTRSSRARKTTAVAKKSPVKKLLARATRSPKKVQEIEEVEEE
VPVLQEEVVMESIPENGVQRFGDIIIEQHNEEDSSMLHLELEDSSDTTIHEINMNQSVQI
EVQENVPDLETSASQIDHSNTVSDCMIIEESSMDKVDMLNEREQMDMEGQDISNDETNQR
VLINFQEVMNDDGETITQVTEILETEEIESETVINEGIGIEVMEVDSQQETSESIENIRE
KTVPDYDMTGMVEMTETTEGDMECLPENTIKKTEPDTEAVSEDELPTEAAAKEPETEAVS
DEELPAAAPADLGETESVSEDELPLDSEKKKKSGTKIMSKTLEKKNKIEGTNKRKLNAEG
EYDPSSPTSENNDETPAKKVALSTEADPGDNKQETKPASPKKKTLPELEKYWKAVNEDPS
DFTGWTYLLQYVDQENDAEAAREAYTKFLERYPYCYGYWRKFADYEKKKGNPENVQRVFD
QGLKAISLSVDLWLHYINHCKTVYEKDEETLREQYERAIEACGLEFRSDRLWESYIKWEL
EGKRLSRVTALYDRLLCTPTLSYISHFEAFQEFVSSNLPNRILNVDDFLALRAEVKALLK
SDDSTSTSAADDAPPGEEPPPHELPPTDEETRAIREKIISSRRKMHKANINAVAARWSYE
EGIKRPYFHVKPLERCQLKNWKEYLDFEIEQKDQNRIIILFERCLIACALYDEFWMRFVR
YLESLKGDNVEKIRDVYTRACMVHHPKKPNLHLQWATFEEGQGNFEKAANILENIDNVIP
NMLQVAYRRINLERRRGDLDKACTLYENYISNSKNRTIANNIVVKYARFLCKVKSDVDKA
IKVLLKATEKDKDNPRLYLQLIDLGMQRTPVDTQEIVGYMDMFIEREHADLEQRVLFAQR
KVEFLEDFSPDIRQVLKAHEQFQKCIKQAKERKKTKNDDTKTDTSPPKKVKTGDQSNVPP
PPSVSSQSSYQYSSGPSGPYQSQQQFQSGQYGGQGGYQQGYQQYPPPSDPNYANYQNWQY
GQGGPQAYGPYNQWGSYNYY
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgcaagtggtgatgaaagtgagatcactttaaatgaacccgtacgacgtaca
agatctagccgtgcacgtaaaactactgcggtagcgaaaaaatctcctgtaaagaaactt
ctagcaagagctacacgttctccgaaaaaagtgcaagagatcgaagaagtggaggaggag
gtgcctgtattacaagaagaagttgtaatggaaagcattccagagaatggagtgcaaaga
tttggtgacattatcattgaacagcataatgaagaagattcttctatgttacatttggaa
ttggaagattctagtgatactactattcacgaaattaatatgaatcagagtgtacaaata
gaagttcaagaaaatgtacctgatttagaaacatctgcatctcaaattgatcattctaat
acagtatcggattgtatgatcatagaagaaagtagtatggataaagttgatatgttgaat
gaacgtgaacaaatggatatggaaggacaagatattagtaatgatgaaacaaatcaacgt
gtattaataaatttccaagaagttatgaatgatgatggggaaacaataacacaagtaaca
gaaatcttagaaacagaggaaattgaatctgaaactgttataaatgaaggtattggaatt
gaagttatggaggtagatagtcaacaagaaacatcagaaagtatagaaaatattagagaa
aaaactgtgcctgattatgatatgacaggaatggtggaaatgacagaaacaacagagggt
gacatggaatgtctacctgaaaatactattaaaaaaacagaacccgatacagaagctgta
tctgaagacgaattgcccactgaagctgcagcaaaggaacctgaaacagaagcagtatct
gatgaagaattgccagcagcagctcctgcagatttaggagaaactgaatcagtttctgaa
gatgaattgccattagacagtgaaaagaagaaaaaaagtggaacaaagataatgagtaaa
accctggaaaagaagaataaaatagaaggaacaaataaacgcaagttaaatgcagaagga
gaatatgatcctagttcaccaacgtctgaaaataatgacgaaacaccagcaaaaaaggtt
gcgctttcaacggaagcagatccaggggacaataaacaagaaactaaaccagcgtcacca
aagaaaaagaccttaccggaattagaaaaatactggaaagccgttaatgaagatccatca
gatttcacgggatggacatatcttcttcagtacgtcgatcaagagaatgatgctgaagct
gcacgtgaggcttatacgaaatttttggagcgttatccatattgctacggttactggaga
aagtttgcagattacgagaagaagaaaggcaaccccgaaaatgtccaaagggtattcgac
caaggtttgaaagccatttcgctcagtgtcgacctttggcttcattacatcaatcactgc
aaaaccgtctatgaaaaagatgaagaaacactacgagaacaatatgaaagagctattgag
gcgtgtggtcttgaattcagatctgatcgtctttgggaaagctatataaagtgggaattg
gagggcaaacgtctcagcagagtaacagcattatatgatcgcctattatgtactccaaca
cttagttatatttctcatttcgaagcatttcaagagttcgtctcttcaaacttaccgaat
cgtattttaaatgttgatgattttcttgcattacgtgctgaagtgaaagcgcttttgaaa
tcggatgacagtacttctacttcagcagcagatgatgcaccacctggagaagaaccgccg
ccacatgaacttccaccaactgatgaggagacccgtgctattagagaaaaaatcattagt
agtagacgtaaaatgcacaaagctaatattaatgctgttgctgcaagatggtcatatgag
gaaggtattaagaggccatatttccacgttaaacctttagaacgatgtcaattgaaaaat
tggaaagaatatttagactttgaaattgaacaaaaagatcagaatcggataatcatctta
tttgaaagatgtttaatagcgtgtgctttatatgatgaattctggatgagattcgttcgt
tatctggaatctttgaaaggtgataatgtggaaaaaattagagatgtatatacgagagct
tgtatggtgcatcacccgaagaaaccaaatttacatctacaatgggcaacatttgaagag
ggtcagggcaattttgagaaggcagcaaatatattggaaaatattgataatgtaatacca
aacatgttacaagtggcatatcgaagaataaatttggagcgtagaagaggagatttagat
aaagcttgtacattgtatgaaaattatattagcaatagtaagaatagaaccattgcgaat
aatattgtagtaaaatatgcacgatttttgtgtaaagtaaagagtgatgtggataaagca
atcaaagtattattgaaggcaacagaaaaagataaagataatccaaggctttatttacaa
ttgattgatttgggaatgcaaaggactcctgttgatactcaagaaattgtaggatatatg
gatatgtttatagaacgagaacacgcggatcttgaacaaagagtactttttgcacaacgt
aaagtagaatttctcgaagattttagtccggatattcgacaagtgttaaaagcgcatgag
caattccaaaaatgtattaagcaagcaaaggaacggaaaaagacgaagaatgacgacaca
aaaacagatacttctcctccaaagaaagttaaaactggagatcaatctaatgtaccacct
ccgccttctgtaagttcgcagtcatcataccaatacagcagtggtccaagtggaccatat
cagtcacaacaacaatttcaaagtggtcaatatggtggtcaaggcggatatcaacagggt
tatcaacagtatccacctccttctgatcccaactatgccaattatcagaattggcaatat
ggacaaggtggaccacaggcatatggaccatacaatcaatggggatcttacaattactat
tag
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integrated database retrieval system
