Bombus pascuorum (common carder bee): 132912778
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Entry
132912778 CDS
T09597
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
bpas
Bombus pascuorum (common carder bee)
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bpas04131
]
132912778
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
bpas04812
]
132912778
Enzymes [BR:
bpas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
132912778
Membrane trafficking [BR:
bpas04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
132912778
Cytoskeleton proteins [BR:
bpas04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
132912778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
MIT
RuvB_N
TIP49
AAA_22
AAA_5
AAA_16
NPHP3_N
Mg_chelatase
IstB_IS21
RNA_helicase
Phage_TTP_13
DUF815
nSTAND3
Motif
Other DBs
NCBI-GeneID:
132912778
NCBI-ProteinID:
XP_060826484
LinkDB
All DBs
Position
12:complement(6007101..6014453)
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AA seq
712 aa
AA seq
DB search
MSYSDGGRPIRKYGTKSPKKLCVTKNENSDKTTTTINCNNHHHNHYHHNHRFLDTPQPSV
HKRNLYIVSFPLILLFNVLRTLLYQLFVVFKYLYTSTSQLIQRRQACKQTCQLEIVVGQK
SSENLNNNLNNTGQTENEGMSQVPRRQVGPGPGDPLLAKQKHHHRRAFEFISKALKIDED
NEGQKEMAIELYKKGIGELEKGIAIECNGGRGEVWEHAQRLHDKMRTNLAMAKDRLDFLV
SVCELKKLDICNEYRAPGNKMDNEHPGKNLRVRRNIHTLQTTRSSLNTNHTKNTNSTQTV
NIGQNTCTQIPKLRPRSPKNYSAHSEASGRKLSVPGKRVGTVISKSQTLPRSMGRSTPVQ
SCHRVTPIKPSSTPPSVKRQLSVPGNGSPVRRPGTPTTSNSNRGTPTRKVPLLKGVDPKL
AQVILDEILEGGAAVHWEDIAGQETAKQALQEIVILPSLRPELFTGLRTPARGLLLFGPP
GNGKTLLARAVATQCNATFFSISAASLTSKYVGEGEKLVRALFAIARELQPSVIFVDEVD
SLLSERRDNEHEASRRLKTEFLVEFDGLPCNPEERVLVMAATNRPQELDEAALRRFTKRV
YVTLPDLRTRIMLLKRLLAKHNDPLTPEELNEMAVLTQGYSGSDLTGLAKDAALGPIREL
NPDQVKELDLNSVRNITMQDFRDSLKRIRRSVSPASLAAYEKWSFEYGDVSL
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacagtgatggcgggcgtccaattcggaagtacggcacaaagtcgccgaaaaag
ttatgcgtgacgaagaatgagaatagtgataaaacaacaacaaccattaactgcaataat
catcaccataatcattaccatcataatcatcgctttctcgacacccctcagccgtcagta
cacaaacgtaatctctatattgtttcttttcctttgatactgctgttcaatgttctgagg
acacttctttatcagttatttgtggtatttaagtacttatatacatctacatctcagctg
attcaacgaagacaagcttgcaagcagacctgccagctagagatcgtagttggtcaaaaa
tctagtgaaaatttaaataataatttaaataatactgggcaaactgaaaacgagggaatg
tcgcaagtgcctagaaggcaggttggtcctggccctggagacccattacttgcaaaacaa
aaacatcatcatcgtagagcttttgaatttattagcaaagcacttaagattgacgaagat
aatgaaggccagaaagaaatggcaattgaactttataagaagggaattggagaattagaa
aaaggaatagctatagaatgtaatggtggtcgaggagaagtatgggaacatgcacaaaga
cttcatgataaaatgcgcactaatttggcaatggcgaaggatagacttgattttcttgtg
agtgtgtgtgagctgaaaaaactggatatctgcaatgaatatcgtgctcctggaaataaa
atggacaacgaacatccaggaaagaatctgagggtccgacgcaatatacacacattacaa
acaactcgatcttctttaaatacaaatcatactaaaaacacaaacagtacacaaacagtg
aacatagggcagaatacatgtacccaaattcccaagttaaggccacgttcaccaaaaaac
tattctgcccactctgaagcatctggaagaaaattatctgttcctggaaaaagagtgggg
acagttataagcaaaagtcaaacattaccacgcagcatgggacgctcaacaccagtacaa
tcttgtcatagagttacacctattaaaccgtcatctacgccaccttctgtaaaaagacaa
ttatcagtacctggaaatggttcacccgttaggagaccaggaacaccaactacatcaaat
agtaatagaggaacacctacaagaaaagtacctcttttaaaaggtgtagatccaaaactt
gcacaagtaattttagatgagattttagaaggaggtgcagcagtacattgggaggacatt
gctggtcaagaaactgcaaagcaagcattacaagagattgttatcttgccttcattaaga
ccagaattatttactggtttacgaacaccggcaagaggattattattatttggtccacca
ggaaatggaaagacattgcttgcacgtgctgtggctacccagtgcaatgctacatttttt
tcaatatctgctgctagtcttacatcgaaatatgttggagaaggagaaaagctagtacga
gctctttttgctatagcgcgagaattacagccatctgtgatctttgttgacgaagtggat
tcgttgttaagcgaacgtagagataatgaacatgaagcttcacggcgattgaagacggaa
tttttagttgaatttgatggtttgccatgtaatccagaagaaagggtattagttatggct
gctacaaatagacctcaagaattggatgaagctgcattaaggagattcacaaagcgagta
tatgttacgttgccagatttacgaacaagaattatgttactgaagcgacttttagctaaa
cataatgatccgttaacaccagaagagttaaatgagatggcagttttaacccagggctat
tctggaagcgatttaacgggtttagcaaaggatgcagcacttggccctattagagaactt
aatccagatcaagtaaaggaattggaccttaattccgtacgcaatattacaatgcaagat
tttcgtgattcgcttaaaagaattcgtagatcagtgtcacctgcaagtttagcagcttat
gaaaagtggagcttcgaatatggtgacgtaagtctatga
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