Bombus pascuorum (common carder bee): 132912897
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Entry
132912897 CDS
T09597
Name
(RefSeq) SR-related and CTD-associated factor 4
KO
K13191
RNA-binding protein 16
Organism
bpas
Bombus pascuorum (common carder bee)
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpas03021
]
132912897
03041 Spliceosome [BR:
bpas03041
]
132912897
Transcription machinery [BR:
bpas03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
132912897
Spliceosome [BR:
bpas03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
132912897
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
132912897
NCBI-ProteinID:
XP_060826682
LinkDB
All DBs
Position
12:12581838..12594470
Genome browser
AA seq
1487 aa
AA seq
DB search
MEAVKAFNAELSALYDVKPPISKAKMNSLTRGAIKAIKFYKHVVQSVEKFIQKCKPEYKV
PGLYVIDSIVRQSRHQFGVEKDVFAPRFAKNMQTTFLNLLKCPQEDKSKVIRVLNLWQKN
AVFPSEVIQPLFDLADPNHPIHKEQAVNTNGTLNASATNNVSNTATSVKTPPLTAKNAVK
DQKLFSSAKPIDPAWLAQTKIETANIVNANKLLGQSNSTQMDVSFLDQLQHLQQLLLKKQ
ESTNEQKSSVKFDKKLLDFDYGEEEDDDVVVASSPAATTGSNTGQHNTVSTGNSLESLGL
LLTNPEVLRQLQTLQQTMQGSTSSSQHETEEKMRKLQQMKQQEEEFDKHLAQTVPNLPFA
SECELKPSDILKPSQQNTYTTNVSSGVIQDMSQPPPGYPPALPYASQPLSNIRQINQQAH
QNQKSPLLDERQDTQDYSGNGARRDSSSVEIVNCENTRSQSRSPDRYRHHSRSRSPRHRD
RDRDRDRDRDRDRDRDRDRKSRSRSRSRRRRSRSRDRGRDRKREDSREKMTEEEREKERE
RRKRGLPPIVRDKLSVCSTTLWVGHLSKLVHQEELSDTFGEFGDIVSIDLISPRGCAFIC
MNRRQDAYRALTKLKNHKMQGKAITLAWAPGKGVKGKEWKDYWEVELGVSYIPWNKLVNV
TDQDLELLEEGGMIDEDTLPPNLKGKLKHSGTNADVLQQQLQLQQQALVAAAGIPNLADG
IVNVMQPSTSAQQQQSQQQTSQQGQQQQQVIDTSQPPPIRPPTSAALLPPPNTQLQMMPP
AFTMPGVPRMIGPMGLPMAHSLMPNVPIGVPPPNMQSLLGPPGMMQTMLTPPVNSPFGAG
VGVGLLTQIPLPAPAAPSDKPNSTGMPHNVPPIGVPPPTTETGMPNLPMLRQPYGVGPSA
PLQMQLPQQQHSADDMDVEMEDAMPQSSNGAKNKSNLTEQLSQNEERAESDQQVEHRDYK
ERERDRENRERRDRETHLSHRDREGTDSRMDRGRDRGRGRDRGRDRRRDLRDRDRDDRRE
RENRENREGNPQTQTLQENETTPKKDGKPSLADRLRQLADGTLPLEDRVDRIIPRNRQER
DRSDRNFDDSRSARGEPLSSLMDLPKFGLPQERGDFPARPPDFRNPQDPREYQQQRDRQS
FGRGHRGSQIHEEFMDVPRLQGGIYQEEFDNRIHGQQRVEEFGRLGSLREQREEFDRSEV
RGRRPLDDRDRFDYEIRRDGFDPRLQDGFDPRGHLDRGDFEPRRREFFGIDPIFGMPPIM
GPRGPRPGHPDGFGPRPAPLGARGPGPLMFHPRGLGPRPLRPGMRPFGPRGPPFDPREPD
AFFRPPFDDIRPHVRPPFGPMGPPSIIPPESAAPWRNQELPPGSWPSDSENHSQRDNLRD
KKGGNKHPNNMERENRNRGRKSRWTNVSPSGEEIEESKEQESTSTNVEEKEEPAKEEEVA
VKEEVKEEIDMKEIISNEQKEDLVETVETKEEGIEMKKEEEEDCRDS
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagttaaggcatttaacgctgagctctcagctctgtatgatgttaaaccacca
atttcgaaagctaagatgaattctttaactagaggtgcaattaaggcaattaaattctat
aaacatgttgtgcaaagtgtcgagaaattcatccaaaaatgtaagccagagtacaaagtg
cctggattgtacgttatagattcaattgtacgtcagtccagacaccaatttggggtagag
aaagatgtctttgctccacgctttgccaaaaacatgcaaactactttcttaaatcttttg
aagtgccctcaagaagataaaagcaaagtaataagagttttaaatctttggcagaagaat
gcagtgtttccttcggaggttatacagcccttatttgatcttgcggatccaaatcatcca
atacataaggagcaagcagttaatactaatggtacattgaatgcgtctgcgacaaataac
gttagtaatactgcaacttctgtaaagactcctcctttgactgcaaaaaatgcagtaaag
gatcaaaaattattttcttctgcaaagccaattgatcctgcttggcttgcacaaacaaaa
atagaaacagcaaatatagttaatgctaataaacttttagggcaatcaaattcaactcaa
atggatgtttcttttcttgatcagttacaacacttacagcagttattattaaaaaagcag
gagtccacaaatgaacagaaaagttctgtaaaatttgataaaaagcttttagattttgat
tatggtgaggaagaggatgatgatgttgttgttgctagttcaccagcagcaaccacaggt
tctaatactggtcaacacaatacagtttcaacaggaaatagtttggagagtcttggactt
cttttaacaaatccagaggttttgagacaacttcaaacattacaacaaacaatgcaagga
agtacttcttcatcacagcacgaaacagaagaaaagatgcggaaactacagcaaatgaag
cagcaagaggaagaatttgataaacatctagctcaaactgttcctaatttaccatttgca
tctgaatgtgaattaaaaccatcagacattttgaaaccaagtcaacaaaatacttataca
acaaatgtaagtagtggagtcatacaagatatgagtcaaccacctcctggttatccaccg
gctctaccgtatgcctctcaacctttatcaaatattaggcagataaatcagcaagcgcat
caaaatcaaaagagtccacttcttgatgaacggcaggacacgcaagattattctggaaat
ggtgcaaggcgagatagtagcagtgtagaaattgtaaattgtgaaaatacaagatcacaa
agtagatcgcctgatcgatacagacatcacagtcgatctagatcaccgcgacacagagat
agggatagagatagagatagggatagggacagggatcgagatcgagacagagatagaaaa
tctcgatcaagaagcagatcaaggaggagaaggtctcgttcaagagacagaggtcgtgac
agaaaacgggaggatagtcgagaaaaaatgactgaggaagaacgagaaaaagaaagagaa
aggcgtaaacgaggattaccaccaattgtgagagataaattaagcgtttgtagtacaact
ctttgggtgggacatctatcgaaattagtacaccaagaagaactttcagatacttttgga
gaatttggtgatattgtcagtatagatttaatttcacccagaggttgcgcctttatatgc
atgaatagaaggcaagatgcatatagggctcttactaagcttaaaaatcataaaatgcaa
ggaaaggcaatcactttagcttgggctccaggaaaaggagtgaaaggaaaagaatggaaa
gattattgggaagttgaattaggagttagttatattccttggaataaattagttaatgtt
actgatcaagatttagaattattagaagaaggaggtatgattgacgaagacactctaccg
cccaatctaaaaggtaaattaaagcattccggaacaaatgcagatgtacttcaacaacag
ttgcaattgcaacagcaagcattagttgcagctgctggaattccaaatttggcggacggt
attgtaaatgtaatgcaaccttcaactagtgctcaacagcaacaatcgcagcaacaaact
tcgcaacaaggtcaacagcagcaacaagtaatcgatacaagtcaacctccaccaattaga
cctcctacatcagctgctcttttaccgccaccaaatacacaattacagatgatgccacct
gcttttacaatgccgggagttcctcgtatgattggaccaatgggattaccaatggcacat
agtttaatgccgaatgttcccataggtgtgccacctccaaatatgcaaagtttattaggg
ccaccgggaatgatgcaaactatgttaacgccacctgtaaattctccatttggagcaggt
gttggtgtcggcttattaactcaaattcctttaccagctccagctgcaccttctgataaa
cctaattctactggtatgccacataatgttcctccaataggagttcctccgccaacaaca
gaaacaggtatgccaaatttaccaatgttacgccaaccgtatggtgtaggcccttctgca
cctttgcaaatgcaactacctcaacaacaacattctgctgatgacatggatgtagagatg
gaagacgcaatgccacaaagttcaaatggagcaaagaataaaagtaatttaactgaacaa
ctttcacaaaatgaagaacgagcagaatctgatcaacaagtagagcatcgagattataaa
gaaagagaaagagatcgtgaaaatagggaaagaagagacagagagacgcatttatctcac
agagatagggaaggtactgactctagaatggatcgcggaagagatcgaggtagagggaga
gataggggacgcgatcgtagaagagatcttagagatagagacagggatgacagaagagaa
agggaaaaccgggaaaatcgagaaggaaatccacaaactcaaactcttcaggaaaacgaa
actactccaaaaaaagatggaaaaccaagcttagctgaccgtttgcgtcaattggctgat
ggcacactgccacttgaagatcgtgtcgatcgaataatacctcgtaatcgccaggaacga
gatagatccgacagaaattttgatgattctcgatcggctcgtggagaacccctttcttct
ttaatggatttgccaaaatttggtttacctcaagaaagaggtgattttccagctcgacca
ccagattttcgtaatccgcaagatccgagagaatatcagcagcaaagagatagacaaagt
ttcggaagaggtcatagaggatcacagatacacgaggaatttatggatgttccaaggttg
caaggaggaatatatcaagaggaatttgataatagaatacatggacaacaaagagtggaa
gaattcggaagacttggatcacttagagaacaaagggaggaatttgataggtctgaagta
cgaggaaggagaccactcgatgatcgggatcggttcgattatgaaattaggcgagatggt
tttgatccacggcttcaagatggtttcgacccaaggggacaccttgaccggggtgatttt
gaacctagaaggcgagaattctttggaattgatcctatttttgggatgccgccaataatg
ggacctagaggacctagacctggacatcctgatgggtttggaccacggccagctccctta
ggagctcgtggaccaggtccattaatgttccatccacgaggtttgggacctcgtcctctt
cgtcctggtatgaggccttttggccctcgtgggccaccttttgatccccgagagccggat
gcctttttcagaccaccttttgatgatattcgtccccatgtcagaccacctttcggtcct
atgggtccgccatccattattcctccagagtctgctgctccctggagaaatcaggaactt
ccgcctggttcctggccttctgattcagagaatcactcacaaagggataatcttagagac
aaaaaaggtggtaataaacatccaaataacatggaaagagaaaatcgaaataggggacga
aaatctagatggactaacgttagtccatctggagaggaaattgaagaatcaaaagaacaa
gaatcaacctctacgaatgttgaagagaaagaagaacctgcaaaggaagaagaagtagct
gtgaaagaagaagtaaaagaagaaattgatatgaaggagataatttctaatgaacagaag
gaagatttagtagaaacggttgagacaaaagaagaaggcattgaaatgaagaaggaggaa
gaagaggattgcagggattcttag
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