Bombus pascuorum (common carder bee): 132912921
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Entry
132912921 CDS
T09597
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
bpas
Bombus pascuorum (common carder bee)
Pathway
bpas03013
Nucleocytoplasmic transport
bpas03015
mRNA surveillance pathway
bpas03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132912921
09122 Translation
03013 Nucleocytoplasmic transport
132912921
03015 mRNA surveillance pathway
132912921
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpas03019
]
132912921
03041 Spliceosome [BR:
bpas03041
]
132912921
03009 Ribosome biogenesis [BR:
bpas03009
]
132912921
03012 Translation factors [BR:
bpas03012
]
132912921
Enzymes [BR:
bpas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
132912921
Messenger RNA biogenesis [BR:
bpas03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
132912921
mRNA cycle factors
Stress granule specific factors
132912921
Spliceosome [BR:
bpas03041
]
Complex C
Other components
EJC/TREX
132912921
Ribosome biogenesis [BR:
bpas03009
]
Eukaryotic type
90S particles
Helicases
132912921
Translation factors [BR:
bpas03012
]
Eukaryotic type
Initiation factors
eIF-4
132912921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_22
UvrD-helicase
AAA_30
TniB
Utp25_C
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
132912921
NCBI-ProteinID:
XP_060826734
LinkDB
All DBs
Position
12:11951997..11953998
Genome browser
AA seq
403 aa
AA seq
DB search
MAEVKSRRVAQTEDLSNVEFETSEDVEVIPTFDNMGLRDELLRGIYAYGFEKPSAIQQRS
IKPIMKGRDVIAQAQSGTGKTATFSIAILQSLDTQVRETQVLVLSPTRELATQIQKVILA
LGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIKRRVLRTRAIKMLVLDE
SDEMLNKGFKEQIYDVYRYLPPATQVVLVSATLPHEILEMTSKFMTDPIRILVKRDELTL
EGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVCSMH
GDMPQKERDNIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRS
GRFGRKGVSINFVKTDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagtaaaatcacgtcgcgtcgcacaaacagaagatctatcaaacgttgagttt
gaaacaagcgaggatgtggaggttattccaacgttcgataatatgggacttagagatgag
ttattacgtggaatctacgcttacggtttcgaaaagccgtccgcgattcaacagcggtct
attaaaccgataatgaaaggacgagacgtaattgcacaagcccagtctggtacaggaaaa
acagcaacattttcaattgctatattacagtcattggacacacaagttagagaaacacaa
gtattagtgttgtcacctacaagagaattagcaactcagatacagaaagttattctggct
ttgggggattttatgaatgttcaatgtcatgcttgtataggtggtacaaatcttggagaa
gatatcagaaaattagattatggacagcatgttgtatcaggcacacctggcagagtattt
gatatgataaaaaggagagttcttagaactagagccataaaaatgttagttcttgatgaa
tctgatgaaatgttaaataagggtttcaaagaacagatttatgacgtatatagatatttg
ccacctgcaactcaagttgtgttggtatccgcaacattgccacatgaaattcttgaaatg
accagtaaatttatgacagatcctattcgtattcttgtaaaacgtgatgaactgacacta
gaggggataaaacagttcttcgtcgctgttgaaagagaagaatggaaatttgacacacta
tgtgatttatatgatacactgacaataacacaagcagtaatcttttgtaatactaaacgt
aaagtagattggttaactgaaaagatgagggaggctaatttcacagtttgctccatgcat
ggtgatatgccacagaaggaaagagataacataatgaaagaatttcgatctggtcaaagt
cgtgttttgattactactgatgtgtgggcacgaggaatagacgttcagcaggtatctctt
gtgatcaattatgatttgcccaacaatcgtgagttgtatattcatagaataggaagatca
ggacgtttcggaagaaaaggtgtttccatcaatttcgtaaaaaccgacgacataaggatt
cttcgagatattgaacaatattattcaacacaaattgatgagatgcctatgaatgtagca
gacttaatataa
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