Bombus pascuorum (common carder bee): 132913169
Help
Entry
132913169 CDS
T09597
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
bpas
Bombus pascuorum (common carder bee)
Pathway
bpas03440
Homologous recombination
bpas03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
132913169
03460 Fanconi anemia pathway
132913169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpas03032
]
132913169
03400 DNA repair and recombination proteins [BR:
bpas03400
]
132913169
Enzymes [BR:
bpas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
132913169
DNA replication proteins [BR:
bpas03032
]
Eukaryotic type
DNA Topoisomerases
132913169
DNA repair and recombination proteins [BR:
bpas03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
132913169
FA (Fanconi anemia) pathway
132913169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
CUT_N
Zn_Ribbon_TF
KH_SLS1_1
zf-LITAF-like
Motif
Other DBs
NCBI-GeneID:
132913169
NCBI-ProteinID:
XP_060827199
LinkDB
All DBs
Position
13:11369330..11373723
Genome browser
AA seq
1044 aa
AA seq
DB search
MLFVTKVFNTTKLSLCKSKQHYQIFTRFKSSFTVMKVLNVAEKNDAAKSIAGYLSRGSSK
RREGLSPYNKIYEFNSYLWNQNCEMIMTSVSGHLLNYEFVGAYRKWQGCHPLSLFDAPVI
KQCPEENSTKIKKTLEREVQKCGALIIWTDCDREGENIGFEIIQVCCAIKPNIRIYRAKF
SEITQASVNRSLQNLCEPDKAISDAVDVRSELDLRIGAAFTRFQTLRLKQVFPRTLADML
ISYGSCQFPTLGFVVERFLAIKRFKSEPYWKIKVMDIRDNISVEFRWARGTLFEKLPCEV
FLDICLEQPMATVKKVLSKPKNKWRPLPLDTIELEKQGSRKLHLSAKETMRIAEKLYTQG
LISYPRTETNIFPKELNLVPLVDQQVTNSAWGNFAQQLLEKGLTPRQGKKSDQAHPPIHP
IKYADSLNGNEAKVYEFVVRHFLACLSCDAVGQETTVEIDIAGEKFAANGLQIIEKNYLN
VYIYEKWNDKEIHIYQEGQVFQPTSIDMIEEKTSPPQLLTEADLISLMDKYGIGTDATHA
EHIDTIKSRHYVGLIDGKHLIPGKLGIGLVMGYDNMGFEMSKPNLRAELEKDLKLICDRQ
KSPKDVLEIQLKKYRDLFKLTLERANLIDIALADYLDERPSNTQVEISHPPQEIIFKCPK
CNSDMILKDRKQGTGKYIGCMSFPTCNNVIWFPQTIEHVEVLDEVCSECTGNIRKLKFKL
LRNAFPIYGTDYTTCIGGCDPMFNEVLNIKNECIKSQESGYHSTFNRTIVSNSSSTRNTV
THPSSNAENRSLSESNASIGSMRNENDDRYTSRSRNVKRQNVSKNNTWIDANNVNSSNND
QRLIRNEQKTWGNIDDDAIIMCNCHENAIRLTVKKEGPNHGRIFYKCAKRENSCNFFLWA
SEDNTQQMQNNTNSSSSQMFIASTSTRSNVGVNSYQDVPMLSHNDVKCHCNQNAIQRIVQ
KDGPNKGRPFYSCPKGINESCKFFQWADENRGNTYNVSGGQDKRTFREEKNLSKRRQIAT
GKRKCGICGTEGHTRRTCPENAMD
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttgttacaaaggtatttaatactacaaagttaagtttatgtaaatcaaaacaa
cactatcagatttttacaaggtttaaaagttcttttacggttatgaaagttctcaacgtt
gcggaaaagaacgatgccgcaaaaagtatcgcgggctatttgtctcgtggctcttctaaa
cggagagaaggattatcgccatataataaaatttatgaatttaactcatatttatggaat
caaaattgcgaaatgatcatgacctctgtatctggtcatttattaaattatgagtttgtt
ggggcatatcgtaaatggcaaggttgtcatccattaagtttattcgatgcacctgtaata
aagcaatgtccggaagagaattctactaagattaaaaagactttggaaagggaagtacag
aaatgtggtgcattaattatttggactgattgtgatcgtgaaggagagaatataggtttt
gaaattattcaagtctgttgtgcaattaagcctaatattcgtatatatagagcaaaattt
tctgagattacgcaagcatctgtaaatagaagtcttcaaaatttatgtgaaccagataaa
gcaattagtgatgctgttgatgtacgaagtgaattggatctaagaataggtgctgcattt
acaagatttcaaacactgagactgaaacaagtatttcccaggactctggctgatatgctg
attagttatggtagctgtcagtttcctacattaggatttgtagttgaaagatttttagcc
ataaaaagatttaagtcagaaccatactggaagataaaagtaatggatatccgtgataat
atttctgtggaatttagatgggcaagaggaacactatttgaaaaattgccttgtgaagta
tttttggatatatgtttggaacagcctatggctactgttaaaaaagtattaagtaaacct
aagaataagtggagaccactaccactggacacaattgagctggaaaagcaaggctctcgt
aaacttcatttaagcgcgaaggagactatgagaattgcggaaaaattatatactcaaggt
ttgatcagttacccacgtacagaaacaaatatatttccaaaagaattgaatttagttcca
ttggtggatcaacaagtaaccaattcagcatggggcaattttgcacagcaattattagaa
aaaggattgactcctagacaaggcaagaaaagcgatcaagcacatcctccaatacatcca
ataaaatatgctgatagtttaaatggcaatgaagctaaagtttatgaatttgtggttcga
cactttttggcttgtttatcatgtgatgcggtaggccaagaaacaacagtagagatcgat
atagctggtgaaaaatttgctgctaatggtctacaaattattgaaaagaattatttaaat
gtgtacatatatgaaaaatggaacgacaaagaaattcatatatatcaagaaggacaagtt
ttccaaccaaccagcatagatatgatagaggaaaaaacaagccccccacaactgttgact
gaagctgatttgatcagtttgatggataagtacggtattggtaccgatgctactcatgca
gagcatatagatacaataaaatcgcgtcattatgtgggtttgatagatggaaagcatcta
atacctggaaaacttgggattggattggtaatgggttatgataatatgggatttgaaatg
tcaaaaccaaacttaagagctgaactcgaaaaggatcttaaattgatatgtgatcgacaa
aaaagtccgaaagatgttttggaaattcaactaaagaaatatcgtgatctatttaaacta
acgttagaacgtgctaatttaatcgatattgctttagccgattaccttgatgaacgaccg
agtaatacacaggtagaaattagtcatccacctcaagaaattatctttaagtgtccgaaa
tgcaactcagatatgatccttaaagatagaaagcaaggcacgggaaagtatattggttgc
atgtcgtttccaacatgtaataatgtaatttggttccctcagactattgaacatgtcgaa
gttttggatgaagtttgttcagaatgtacaggaaatattcgtaaattaaaatttaaacta
ttgagaaacgctttccccatttatggtactgattatacaacttgcataggtggttgtgat
cctatgttcaacgaagtattaaatataaagaacgaatgtattaaaagtcaagaatctggt
taccacagtacatttaacaggactattgtgtcaaattcatcttcaacaaggaacactgta
actcacccatcttcaaatgctgaaaacaggagtttatctgaaagcaacgcatctataggg
tccatgcgaaatgaaaacgatgatcgttatacaagcagatcaagaaatgttaaaaggcaa
aatgtttcaaagaataatacatggatcgatgctaataatgtcaattcttcaaataatgat
caaaggttgattagaaatgaacaaaaaacatggggtaacatcgatgacgatgctattatt
atgtgtaattgccatgaaaatgcgattcgattaacagtaaagaaagaaggaccaaatcat
ggaaggatattttacaaatgtgcgaagcgtgaaaatagttgtaacttttttctttgggca
tcagaagacaatacacaacaaatgcaaaataatacaaatagtagttcaagccagatgttc
attgccagtacaagcactagatcaaatgttggtgttaatagttatcaagatgttcctatg
ttatcacacaatgacgttaaatgtcattgtaatcaaaacgcaatacagcggattgtacag
aaagatggtccaaataaaggacgtcctttttactcatgccctaagggtataaacgaatct
tgcaaattttttcaatgggcggatgaaaataggggaaatacatataatgtgtctggagga
caagataaaagaacatttagagaagagaaaaatttatcaaaaagacgtcaaattgctact
ggtaaaagaaagtgtggaatctgcggtacagaaggacatacaagaaggacttgtcccgag
aatgcaatggattaa
DBGET
integrated database retrieval system
