Bombus pascuorum (common carder bee): 132913441
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Entry
132913441 CDS
T09597
Name
(RefSeq) pre-mRNA splicing regulator USH1G isoform X1
KO
K21878
Usher syndrome type-1G protein
Organism
bpas
Bombus pascuorum (common carder bee)
Pathway
bpas04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
132913441
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
bpas03037
]
132913441
Cilium and associated proteins [BR:
bpas03037
]
Primary cilia and associated proteins
USH complex and associated proteins
132913441
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank_4
Ank
Ank_3
Ank_5
SAM_1
SAM_7
Motif
Other DBs
NCBI-GeneID:
132913441
NCBI-ProteinID:
XP_060827781
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All DBs
Position
13:1490909..1499392
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AA seq
489 aa
AA seq
DB search
MTSERFHRAARDGALDILKEATKKDCNARDDGGMTPTLWAAFEGHIDALRLLVARGGDPD
KTDYFGNTALHLAAARGHEYCVKFLVKFGCNIWSLDIDRHSARDLAAINGREMTLQFLDL
AQADQELNNRKKSRLLREKAEKDAEKRLKEYMKKQKMAEIRAEKEQKKLLKDRTKLDLAT
VNETGILPHKPSMLTFKGRVKPSPTFSDIVGTTAKKQGSAVCRKALARKAVDDFKVVEIE
VNGKKSIRSLTGLRRDSEVMYVGTYETQTQQAGRRGKISDVWGTLSKAQSTPDLLGDRSF
DEDTEQDDREDMDGVGDNVLLQEPASIFNRPGFGSVAFRRAITTTFDNLPVSQVDAHEQN
GNSCVNGSVNGSINGHRTNSNGHNEEISIGSAGSLARRQSMWDDDLLSEEETDEEWTPLQ
RFLVANNLSSVHPVLESEQIDLEALMLLTETDIAALKLPLGPKRKLMNAIANRKRALDAP
ENVIKDSRL
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccgaacgatttcacagagctgcacgcgatggcgccttagacatcttaaaagaa
gcaacaaaaaaggattgtaacgcgcgggatgacggtggaatgacccctacattatgggca
gcctttgaaggtcatatagatgctctgagactgctcgtcgccagagggggggatcccgac
aaaaccgattattttggtaatacggcccttcacctggcagcggcaaggggtcatgaatat
tgcgtcaagttcctcgtgaaattcggctgcaatatttggtcattggatatcgacaggcat
tcagctagagacttggctgctataaatggtagagagatgactcttcagtttctggatctt
gctcaagctgatcaagaattaaataatcgcaaaaagagtcgtttacttcgagaaaaggca
gaaaaagatgctgaaaaaaggttaaaagaatatatgaaaaaacagaagatggcggaaatc
agagctgaaaaggaacagaaaaagttattaaaagatcgaacgaaattggatttagctacg
gttaacgaaaccggcattctacctcacaaacccagtatgttgaccttcaaaggtcgagtg
aagccttcaccaacattcagcgatatcgttggcactactgcaaagaaacaaggcagtgca
gtatgcagaaaagctttagcgagaaaagccgttgatgatttcaaagtagtagagattgaa
gtaaatggaaaaaaatcgatacgtagtctcactggtcttagaagagattctgaagtaatg
tacgtaggaacatacgaaacgcaaactcaacaagcaggaaggagaggaaagatctctgat
gtttggggtacactaagcaaagcacaaagtactcctgatctcttgggcgatcgatccttt
gacgaagataccgaacaagatgacagagaagatatggatggcgtaggagataatgttttg
ctgcaggaaccggcaagtatcttcaatcgacctggttttggatcggtagcatttcgaaga
gcgataacaactactttcgataatctaccagtctcgcaagtggatgcacatgaacaaaac
ggtaactcttgcgtgaatggttctgtaaacggatctataaatggtcatagaaccaactca
aatgggcacaacgaagaaatcagcataggaagcgcaggtagtttagctcgtcgacaaagt
atgtgggatgatgatttactttcagaggaagaaaccgatgaggaatggacaccattgcaa
agatttttagttgccaataatctttcatcggtacatccggttttagaatcagaacaaatt
gatctagaagcactaatgttactaactgaaactgatatagcggcacttaaacttccactt
ggacctaaaaggaaattaatgaatgcaatagctaacagaaaaagagcattagatgcccca
gaaaatgtcattaaagatagtagactgtga
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